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Cmc08g0228491 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0228491
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome locationCMiso1.1chr08:22721985..22722245
RNA-Seq ExpressionCmc08g0228491
SyntenyCmc08g0228491
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALF03348.1 NADH dehydrogenase subunit 5 [Cucumis sativus var. hardwickii]2.1e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

ASY96379.1 NADH dehydrogenase subunit 5 [Cucumis melo subsp. agrestis]2.1e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

ASY96814.1 NADH dehydrogenase subunit 5 [Cucumis melo var. momordica]2.1e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

YP_004841832.1 NADH-plastoquinone oxidoreductase subunit 5 [Cucumis melo subsp. melo]2.1e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

YP_247647.1 NADH dehydrogenase subunit 5 [Cucumis sativus]2.1e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

TrEMBL top hitse value%identityAlignment
A0A1S4EU57 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.0e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

A0A1X9Q1P6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.0e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

A0A218KG84 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.0e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

A0A249RXU8 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.0e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

A0A249RZL2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.0e-20100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

SwissProt top hitse value%identityAlignment
B0Z4S2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic8.7e-2294.92Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLI+LIGIITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSY+AALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

B0Z506 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic8.7e-2294.92Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLI+LIGIITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSY+AALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

B0Z590 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic8.7e-2294.92Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLI+LIGIITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSY+AALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic2.7e-23100Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

Q9MTI4 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic8.7e-2294.92Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        MNLI+LIGIITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSY+AALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

Arabidopsis top hitse value%identityAlignment
ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein3.8e-0431.08Show/hide
Query:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEV---VFECLIV
        L+ ++ I++++FG  +A+ Q  +KR LAYS++ Q+GY+++ + +G        +IT++L  I +    F C+I+
Subjt:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEV---VFECLIV

ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein5.8e-2188.14Show/hide
Query:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH
        M +I+LIGIITVL GATLALAQKDIKR LAYSTMSQLGYMMLALGMGSY++ALFHLITH
Subjt:  MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITH

ATMG00060.1 NADH dehydrogenase subunit 5C3.6e-0737.5Show/hide
Query:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEVVFECLIV----CLIHVYGDEKVVR
        +I   G  T    AT  + Q D+KR +AYST SQLGYM+ A G+ +Y  ++FHL+ H        F+ L+      +IH   DE+ +R
Subjt:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEVVFECLIV----CLIHVYGDEKVVR

ATMG00513.1 NADH dehydrogenase 5A3.6e-0737.5Show/hide
Query:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEVVFECLIV----CLIHVYGDEKVVR
        +I   G  T    AT  + Q D+KR +AYST SQLGYM+ A G+ +Y  ++FHL+ H        F+ L+      +IH   DE+ +R
Subjt:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEVVFECLIV----CLIHVYGDEKVVR

ATMG00665.1 NADH dehydrogenase 5B3.6e-0737.5Show/hide
Query:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEVVFECLIV----CLIHVYGDEKVVR
        +I   G  T    AT  + Q D+KR +AYST SQLGYM+ A G+ +Y  ++FHL+ H        F+ L+      +IH   DE+ +R
Subjt:  LIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEVVFECLIV----CLIHVYGDEKVVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTAATAGCTTTGATAGGTATAATAACAGTACTATTTGGAGCTACTTTAGCTCTTGCTCAAAAAGATATTAAGAGAAGTTTAGCCTATTCTACAATGTCTCAATT
GGGCTATATGATGTTAGCTTTGGGTATGGGGTCTTATCAGGCTGCTTTATTTCATTTGATTACTCATGTCTTGATAGCCATTGAGGTTGTTTTCGAATGTTTGATTGTAT
GTTTAATACATGTATATGGGGATGAGAAAGTTGTTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTAATAGCTTTGATAGGTATAATAACAGTACTATTTGGAGCTACTTTAGCTCTTGCTCAAAAAGATATTAAGAGAAGTTTAGCCTATTCTACAATGTCTCAATT
GGGCTATATGATGTTAGCTTTGGGTATGGGGTCTTATCAGGCTGCTTTATTTCATTTGATTACTCATGTCTTGATAGCCATTGAGGTTGTTTTCGAATGTTTGATTGTAT
GTTTAATACATGTATATGGGGATGAGAAAGTTGTTAGATAA
Protein sequenceShow/hide protein sequence
MNLIALIGIITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHVLIAIEVVFECLIVCLIHVYGDEKVVR