; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0228921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0228921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr08:23411617..23412366
RNA-Seq ExpressionCmc08g0228921
SyntenyCmc08g0228921
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05415.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.5e-12997.11Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        MQ STYDHS+FYRRSDNGIVLLVVYVDD VITGNDA GISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDS S
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRNS
        SS YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRN+
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRNS

XP_031744753.1 uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]7.3e-11991.63Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKYFLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        MPNQQLVKEG+LCKDPERYRRLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSRED RS
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        +S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

XP_031744754.1 uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]7.3e-11991.63Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKYFLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        MPNQQLVKEG+LCKDPERYRRLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSRED RS
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        +S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

XP_031744755.1 uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]7.3e-11991.63Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKYFLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        MPNQQLVKEG+LCKDPERYRRLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSRED RS
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        +S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

XP_031744758.1 uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]7.3e-11991.63Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKYFLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        MPNQQLVKEG+LCKDPERYRRLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSRED RS
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        +S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

TrEMBL top hitse value%identityAlignment
A0A1S3Y520 uncharacterized mitochondrial protein AtMg00810-like2.2e-9773.75Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        M+ S  DH++FY++SD+GI+LLVVYVDDIVITG+D +GIS+LK+FL   F TKD+GQLKYFLG+EV RSKK I+LSQRKY LDLL+ET KLG+KP    M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKE-GKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSR
        +PN QLVKE G+L +DPE+YRRLVGKLNYLT+T+PDIAYSVS+VSQFMSSPTV HWAA+EQILCYLK +PGRG++YK++ HT +ECF+DADWAGS+ D R
Subjt:  MPNQQLVKE-GKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSR

Query:  SSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        S++ YCVFVGGNL+SWKSKKQNVVSRSSAE+EYRAM QSV
Subjt:  SSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

A0A1S4CYD8 uncharacterized mitochondrial protein AtMg00810-like2.2e-9773.75Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        M+ S  DH++FY++SD+GI+LLVVYVDDIVITG+D +GIS+LK+FL   F TKD+GQLKYFLG+EV RSKK I+LSQRKY LDLL+ET KLG+KP    M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKE-GKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSR
        +PN QLVKE G+L +DPE+YRRLVGKLNYLT+T+PDIAYSVS+VSQFMSSPTV HWAA+EQILCYLK +PGRG++YK++ HT +ECF+DADWAGS+ D R
Subjt:  MPNQQLVKE-GKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSR

Query:  SSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        S++ YCVFVGGNL+SWKSKKQNVVSRSSAE+EYRAM QSV
Subjt:  SSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

A0A5D3C204 Putative mitochondrial protein1.7e-12997.11Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        MQ STYDHS+FYRRSDNGIVLLVVYVDD VITGNDA GISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDS S
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRNS
        SS YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRN+
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRNS

A0A6J1DFP5 uncharacterized protein LOC1110203916.3e-10075.73Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        M+ S  +HS+FY++S++G++LLVVYVDDIVITGND+SGI SLK+FL   FHTKD+G LKYFLGIEV R+KK I+LSQRKYVLDLL+ET KL AKP  T M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        +PN QL  EG+L KD E+YRRLVGKLNYLT+T+PDIAY VS++SQFMSSPT DHW A+E ILCYLK APGRG+LYKDHGH  +ECFSDADWAGS+E+ RS
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        +S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

A0A6P6VCZ7 uncharacterized protein LOC1137194881.1e-10177.82Show/hide
Query:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM
        MQ S  DHSIFYR S+ GI+LLVVYVDDIVITG+D+SGISSLK+FL   F+TKD+G LKYFLG+EV  SKK I+LSQRKYVLDLLSE+  LGAKP  T M
Subjt:  MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLM

Query:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS
        +PN QL KEG+LC DPERYRRL+GKLNYLT+T PDIAYSVSV+SQ+MSSPTVDHW AVEQ+L YLK APGRGILY +HGHTR+ECFSD+DWAG +ED RS
Subjt:  MPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS

Query:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV
        +S YCVFVGGNLVSWKSKKQNVVSRSSAE+EYRAM +SV
Subjt:  SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.2e-2630.9Show/hide
Query:  NGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSE--TEKLGAKPSGTLMMPNQQLVKEGKLCK
        N  + +++YVDD+VI   D + +++ K +L   F   D+ ++K+F+GI +   +  IYLSQ  YV  +LS+   E   A  +      N +L+   + C 
Subjt:  NGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSE--TEKLGAKPSGTLMMPNQQLVKEGKLCK

Query:  DPERYRRLVGKLNYLTM-TQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDH--GHTRVECFSDADWAGSREDSRSSSEYCV-FVGG
         P   R L+G L Y+ + T+PD+  +V+++S++ S    + W  ++++L YLK      +++K +     ++  + D+DWAGS  D +S++ Y       
Subjt:  DPERYRRLVGKLNYLTM-TQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDH--GHTRVECFSDADWAGSREDSRSSSEYCV-FVGG

Query:  NLVSWKSKKQNVVSRSSAESEYRAMTQSVRNSM
        NL+ W +K+QN V+ SS E+EY A+ ++VR ++
Subjt:  NLVSWKSKKQNVVSRSSAESEYRAMTQSVRNSM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-3133.98Show/hide
Query:  MQTSTY-----DHSIFYRR-SDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSK--KCIYLSQRKYVLDLLSETEKLG
        M++ TY     D  ++++R S+N  ++L++YVDD++I G D   I+ LK  L   F  KD+G  +  LG++++R +  + ++LSQ KY+  +L       
Subjt:  MQTSTY-----DHSIFYRR-SDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSK--KCIYLSQRKYVLDLLSETEKLG

Query:  AKPSGTLMMPNQQLVK---------EGKLCKDPERYRRLVGKLNY-LTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTR
        AKP  T +  + +L K         +G + K P  Y   VG L Y +  T+PDIA++V VVS+F+ +P  +HW AV+ IL YL+   G  + +       
Subjt:  AKPSGTLMMPNQQLVK---------EGKLCKDPERYRRLVGKLNY-LTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTR

Query:  VECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS
        ++ ++DAD AG  ++ +SS+ Y     G  +SW+SK Q  V+ S+ E+EY A T++
Subjt:  VECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS

P92519 Uncharacterized mitochondrial protein AtMg008101.5e-3738.6Show/hide
Query:  LVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGT-LMMPNQQLVKEGKLCKDPERYR
        L++YVDDI++TG+  + ++ L   L   F  KD+G + YFLGI++      ++LSQ KY   +L+    L  KP  T L +     V   K   DP  +R
Subjt:  LVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGT-LMMPNQQLVKEGKLCKDPERYR

Query:  RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQ
         +VG L YLT+T+PDI+Y+V++V Q M  PT+  +  ++++L Y+K     G+    +    V+ F D+DWAG     RS++ +C F+G N++SW +K+Q
Subjt:  RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQ

Query:  NVVSRSSAESEYRAM
          VSRSS E+EYRA+
Subjt:  NVVSRSSAESEYRAM

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.2e-4844.07Show/hide
Query:  STYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPN
        S  D S+F  +    IV ++VYVDDI+ITGND + + +    L   F  KD  +L YFLGIE  R    ++LSQR+Y+LDLL+ T  + AKP  T M P+
Subjt:  STYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPN

Query:  QQL-VKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSS
         +L +  G    DP  YR +VG L YL  T+PDI+Y+V+ +SQFM  PT +H  A+++IL YL   P  GI  K      +  +SDADWAG ++D  S++
Subjt:  QQL-VKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSS

Query:  EYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS
         Y V++G + +SW SKKQ  V RSS E+EYR++  +
Subjt:  EYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.5e-4742.8Show/hide
Query:  STYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPN
        S  D S+F  +    I+ ++VYVDDI+ITGND   +      L   F  K+   L YFLGIE  R  + ++LSQR+Y LDLL+ T  L AKP  T M  +
Subjt:  STYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPN

Query:  QQL-VKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSS
         +L +  G    DP  YR +VG L YL  T+PD++Y+V+ +SQ+M  PT DHW A++++L YL   P  GI  K      +  +SDADWAG  +D  S++
Subjt:  QQL-VKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSS

Query:  EYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS
         Y V++G + +SW SKKQ  V RSS E+EYR++  +
Subjt:  EYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.5e-5043.72Show/hide
Query:  DHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQL
        DH+ F + +    + ++VYVDDI+I  N+ + +  LK+ L+  F  +D+G LKYFLG+E+ RS   I + QRKY LDLL ET  LG KPS   M P+   
Subjt:  DHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQL

Query:  -VKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYC
            G    D + YRRL+G+L YL +T+ DI+++V+ +SQF  +P + H  AV +IL Y+K   G+G+ Y      +++ FSDA +   ++  RS++ YC
Subjt:  -VKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYC

Query:  VFVGGNLVSWKSKKQNVVSRSSAESEYRAMT
        +F+G +L+SWKSKKQ VVS+SSAE+EYRA++
Subjt:  VFVGGNLVSWKSKKQNVVSRSSAESEYRAMT

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.7e-1034.57Show/hide
Query:  YLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFV
        YLT+T+PD+ ++V+ +SQF S+       AV ++L Y+K   G+G+ Y      +++ F+D+DWA   +  RS + +C  V
Subjt:  YLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFV

ATMG00810.1 DNA/RNA polymerases superfamily protein1.0e-3838.6Show/hide
Query:  LVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGT-LMMPNQQLVKEGKLCKDPERYR
        L++YVDDI++TG+  + ++ L   L   F  KD+G + YFLGI++      ++LSQ KY   +L+    L  KP  T L +     V   K   DP  +R
Subjt:  LVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGT-LMMPNQQLVKEGKLCKDPERYR

Query:  RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQ
         +VG L YLT+T+PDI+Y+V++V Q M  PT+  +  ++++L Y+K     G+    +    V+ F D+DWAG     RS++ +C F+G N++SW +K+Q
Subjt:  RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQ

Query:  NVVSRSSAESEYRAM
          VSRSS E+EYRA+
Subjt:  NVVSRSSAESEYRAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACGAGTACATATGATCATTCTATTTTTTATCGTCGATCTGATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATC
GGGTATTTCATCTCTCAAAACTTTCCTTCAGGGTCATTTTCACACAAAAGATATGGGTCAACTGAAATATTTTTTGGGCATTGAAGTGATGAGAAGTAAGAAATGTATTT
ATTTGTCTCAACGAAAATATGTACTTGATTTGTTGTCTGAAACAGAAAAATTAGGAGCCAAACCAAGTGGTACTCTGATGATGCCGAATCAGCAACTTGTTAAAGAAGGA
AAATTATGTAAAGACCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAATGACTCAACCAGACATTGCTTATTCTGTTAGTGTGGTAAGTCAGTTTAT
GTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAACAGATTCTATGTTATTTGAAAGCTGCTCCTGGACGTGGGATCTTATACAAAGATCATGGACATACGAGAGTTG
AATGTTTTTCTGATGCTGATTGGGCGGGATCTCGAGAGGATAGCAGATCAAGCTCTGAATATTGTGTCTTTGTAGGCGGAAACTTGGTATCATGGAAGAGTAAGAAACAA
AATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGACACAATCTGTGCGAAATAGTATGGATTCACCAACTATTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACGAGTACATATGATCATTCTATTTTTTATCGTCGATCTGATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATC
GGGTATTTCATCTCTCAAAACTTTCCTTCAGGGTCATTTTCACACAAAAGATATGGGTCAACTGAAATATTTTTTGGGCATTGAAGTGATGAGAAGTAAGAAATGTATTT
ATTTGTCTCAACGAAAATATGTACTTGATTTGTTGTCTGAAACAGAAAAATTAGGAGCCAAACCAAGTGGTACTCTGATGATGCCGAATCAGCAACTTGTTAAAGAAGGA
AAATTATGTAAAGACCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAATGACTCAACCAGACATTGCTTATTCTGTTAGTGTGGTAAGTCAGTTTAT
GTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAACAGATTCTATGTTATTTGAAAGCTGCTCCTGGACGTGGGATCTTATACAAAGATCATGGACATACGAGAGTTG
AATGTTTTTCTGATGCTGATTGGGCGGGATCTCGAGAGGATAGCAGATCAAGCTCTGAATATTGTGTCTTTGTAGGCGGAAACTTGGTATCATGGAAGAGTAAGAAACAA
AATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGACACAATCTGTGCGAAATAGTATGGATTCACCAACTATTATCTGA
Protein sequenceShow/hide protein sequence
MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEG
KLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQ
NVVSRSSAESEYRAMTQSVRNSMDSPTII