; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0229091 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0229091
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionexosome complex component RRP4 homolog
Genome locationCMiso1.1chr08:23801949..23817810
RNA-Seq ExpressionCmc08g0229091
SyntenyCmc08g0229091
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0000178 - exosome (RNase complex) (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041865.1 exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa]1.1e-17599.69Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRV
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL

Query:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
        DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
Subjt:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML

Query:  GSEFCVLTAEKEVERRSSSKKRG
        GSEFCVLTAEKEVERRSSSKKRG
Subjt:  GSEFCVLTAEKEVERRSSSKKRG

XP_008442058.1 PREDICTED: exosome complex component RRP4 homolog isoform X1 [Cucumis melo]4.5e-177100Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
        QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG

Query:  SEFCVLTAEKEVERRSSSKKRG
        SEFCVLTAEKEVERRSSSKKRG
Subjt:  SEFCVLTAEKEVERRSSSKKRG

XP_008442061.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo]4.5e-177100Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
        QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG

Query:  SEFCVLTAEKEVERRSSSKKRG
        SEFCVLTAEKEVERRSSSKKRG
Subjt:  SEFCVLTAEKEVERRSSSKKRG

XP_031740749.1 exosome complex component RRP4 homolog [Cucumis sativus]1.3e-16895.72Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPK-EDAMIEDHVDKPEQKALKFEGT----VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPK-EDAMIEDHVDKPEQKALKFEGT----VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

XP_038882865.1 exosome complex component RRP4 homolog isoform X2 [Benincasa hispida]9.1e-16290.21Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLNHTQKIRL+RAQERL+SLSSK NSDASV+VADTIPLNYEDGVLKGHGTLDLNGEV+A+ICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL V  YL+KRRKQHFHHL+
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTV-----QEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDP ED MI+D ++K EQK  KFEGT      Q VYTPLETRQNICRTANAIRVLS LGFIMTVEVIMEIV+LSIS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTV-----QEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERR+SSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

TrEMBL top hitse value%identityAlignment
A0A1S3B4T9 exosome complex component RRP4 homolog isoform X22.2e-177100Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
        QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG

Query:  SEFCVLTAEKEVERRSSSKKRG
        SEFCVLTAEKEVERRSSSKKRG
Subjt:  SEFCVLTAEKEVERRSSSKKRG

A0A1S3B5H2 exosome complex component RRP4 homolog isoform X12.2e-177100Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
        QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG

Query:  SEFCVLTAEKEVERRSSSKKRG
        SEFCVLTAEKEVERRSSSKKRG
Subjt:  SEFCVLTAEKEVERRSSSKKRG

A0A5A7TKA1 Exosome complex component RRP4-like protein isoform X25.3e-17699.69Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRV
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL

Query:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
        DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
Subjt:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML

Query:  GSEFCVLTAEKEVERRSSSKKRG
        GSEFCVLTAEKEVERRSSSKKRG
Subjt:  GSEFCVLTAEKEVERRSSSKKRG

A0A5D3C2G3 Exosome complex component RRP4-like protein isoform X22.2e-177100Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
        QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLG

Query:  SEFCVLTAEKEVERRSSSKKRG
        SEFCVLTAEKEVERRSSSKKRG
Subjt:  SEFCVLTAEKEVERRSSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog2.5e-15788.38Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLN TQKIRL+RA E L+S+SSK NSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVA+ICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQLL VSPYL+KRRKQHFHHL+
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLD

Query:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGT----VQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDP ED M+ED ++K EQK  KFEG+    VQE +YTPLETRQNICRTANAIRVLS LGFIM+VEVIME V+LSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGT----VQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKE ERR+SSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp42.7e-4440.48Show/hide
Query:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G + AS+ G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL-KFEGTVQE
        ++ AEV+    DG + +  RS KYGKL  G  L V P L+ R K H + L   G+D+IL  NG++W+ +H + +  ++    +++   +++   E    +
Subjt:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKAL-KFEGTVQE

Query:  VYTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID
         YT L  +R +IC    A R L     S   F  +  V   + +L++  N+D
Subjt:  VYTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID

Q13868 Exosome complex component RRP46.5e-4650Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  A++ L     +      VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCN

Query:  GFIWIGEHVDPKED
        GFIWI    + KE+
Subjt:  GFIWIGEHVDPKED

Q2KID0 Exosome complex component RRP41.3e-4650Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCN

Query:  GFIWIGEHVDPKED
        GFIW+    + KED
Subjt:  GFIWIGEHVDPKED

Q8VBV3 Exosome complex component RRP47.7e-4750.92Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL +A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCN

Query:  GFIWI---GEHVDPKEDA
        GFIWI    EH D  EDA
Subjt:  GFIWI---GEHVDPKEDA

Q9ZVT7 Exosome complex component RRP4 homolog2.9e-11866.15Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQL L+ TQK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL

Query:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
        +  GIDLI+GCNGFIW+GEHV+ ++   I+D   K E+         ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID+H+ML
Subjt:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML

Query:  GSEFCVLTAEKEVERRSSSKKR
        GSEF V+ AE E ERR + +K+
Subjt:  GSEFCVLTAEKEVERRSSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 42.0e-11966.15Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQL L+ TQK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHL

Query:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML
        +  GIDLI+GCNGFIW+GEHV+ ++   I+D   K E+         ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID+H+ML
Subjt:  DQYGIDLILGCNGFIWIGEHVDPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEML

Query:  GSEFCVLTAEKEVERRSSSKKR
        GSEF V+ AE E ERR + +K+
Subjt:  GSEFCVLTAEKEVERRSSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTTTACAACTTTCCTTGAATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGT
AGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGAACTCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAACGAG
TCAATAAGCTTATCTATGTACGTGCCTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATCGTAGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCCATGAACTTGCCCGATGGTATTCAGAGGAGGCGAACTGCTGTCGATGAACTGAACATGCGGAGCATTTTTGA
AGAAAATGACGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAGCTGCTCATAG
TTTCACCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTGGATCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTT
GATCCCAAAGAGGATGCGATGATAGAGGATCACGTTGATAAACCTGAACAAAAGGCTTTGAAATTTGAAGGAACTGTGCAAGAAGTATATACTCCATTAGAGACACGACA
GAATATCTGCAGAACTGCAAACGCTATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTG
ATGTGCACGAAATGCTTGGCTCAGAGTTCTGTGTTCTCACAGCAGAAAAAGAGGTTGAACGACGTTCTTCGAGTAAGAAAAGGGGGTAA
mRNA sequenceShow/hide mRNA sequence
TTTAGTTTAAGCTGTTTGAATTGAAGTGACCATAAACCCAAAAAATCTGAGTGAAAGATGTTTCAACTATTTTTGAAAATGAGTGCTGCGAGACAAACCTATTATAATCT
GTTTCTATAACAATTTCCCAAACAAAACCTACACATTGTCAGCCGTTGCCCCGCTGCTCAGTCTCCTTCTCCGGTGAGCCTCCAACAGCCACAGGCGGAAGGCAGGACAA
CTGGATCCCACAGCCCCTCAAACACGCAGCCCTGTCGTCGAGGGTGGTTTAAGTTCACCCATTAATTTGACTTTGCGACGCTAGCGTCACTTCAAACGGCTTCGCCTAGG
TCTTGGCAGCATCATTTCTTCTCCGTTAGAGACTCCGGCGCGAACAACAGGTTGTTCAAAACATTTCTGACGTGTGTTTGTCTTGCAGCGCGGCATTTCTGACTTGAGGG
AGCTTTTTGGAGTGACCGGTTGGTGGCTCTTGGAACTCGAGGAAGTTGGCATTTGCTCAAGAAAGTGAATTTTTGATTGAGAATTGTAGGATTTTTGAACGAGGCCAAAT
TGAAGTGAGGAAAGCATATAATCCTGGAGAATCGAGTCATTGATGATATGAGAGGTTTACAACTTTCCTTGAATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAA
AGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGAACTCTTGA
CTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAACGAGTCAATAAGCTTATCTATGTACGTGCCTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATCG
TAGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCCATGAACTTGCCCGATGGTATTCAG
AGGAGGCGAACTGCTGTCGATGAACTGAACATGCGGAGCATTTTTGAAGAAAATGACGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGC
AAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAGCTGCTCATAGTTTCACCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTGGATCAATATGGTATTG
ACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGAGGATGCGATGATAGAGGATCACGTTGATAAACCTGAACAAAAGGCTTTGAAA
TTTGAAGGAACTGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGCAGAACTGCAAACGCTATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGT
AGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGTGTTCTCACAGCAGAAAAAGAGGTTGAACGAC
GTTCTTCGAGTAAGAAAAGGGGGTAATTTTGTCTTCTTTCAAGAATTGTGAGTAATTTGAATTACCAAAACCGTTTGATTTGCAGAGAAATTTAGTGTTATTATATTATG
TTGGATTTTAGTTTACCACCACTTTGTATCTGTTAGTATCAGTATAGAATACAATGTCCTCAATTATTATGCAGTACGTGGTTTCATAAATGTCCAAGGATTACTTAGGA
TTTTACCATATGTCATATCTTTGGCTAGATTAATACTAGACGAAACTTAATTTTATTAAATGTACTATTACTGCTGATAATGGTATCTTATGATCATGAGGTGGCAAAAA
GAAAACCATCAGAAGATTGTTTGGT
Protein sequenceShow/hide protein sequence
MRGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLD
INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLIVSPYLIKRRKQHFHHLDQYGIDLILGCNGFIWIGEHV
DPKEDAMIEDHVDKPEQKALKFEGTVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG