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Cmc08g0229331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0229331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCMiso1.1chr08:24249657..24249971
RNA-Seq ExpressionCmc08g0229331
SyntenyCmc08g0229331
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037824.1 uncharacterized protein E6C27_scaffold113G00050 [Cucumis melo var. makuwa]1.5e-2867.31Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD  +LSFV +TLQKF ELL L AN+ KSSIFV G SNE AS +AAS+ FVLGN  +RYLGLPLL+GRL  NDC PLIQ I SR+R W  RV+S+
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
        V RL
Subjt:  VSRL
KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]4.2e-2865.05Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC+AD  +LSFV +TLQKF ELLGL+AN+ K SIFV G +NE AS LAA++ F+LGN  +RYL LPLL+GRLR +DC PLIQ I SR+R W ARV+SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSR
          R
Subjt:  VSR
KAA0062333.1 putative reverse transcriptase [Cucumis melo var. makuwa]5.0e-2966.35Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD S+L F+ + LQKF EL GLF N+ K+S+FV GV++E AS LAAS+ FVLGN  +RYLGLPLLSGRLR +DC PLIQ I SR+R WFARV SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
          RL
Subjt:  VSRL
KAA0065355.1 F17F8.5 [Cucumis melo var. makuwa]3.8e-2968.27Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD  +LSF+ + LQKF EL GLF N+RKSSIFV  VSNEAAS LAAS+ FV GN  +RYLGLPLL GRLR NDC PLIQ + SR+R W A+V+SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
        V RL
Subjt:  VSRL
TYK12108.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.6e-2764.42Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD  ++ F+ + LQKF EL GLFAN RKS IFV GV+NE AS LAA + FV GN  +RYLGLPLL+GRLR NDC P+IQ I SR+R W ARV+SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
          RL
Subjt:  VSRL
TrEMBL top hitse value%identityAlignment
A0A5A7T2Y1 Uncharacterized protein7.1e-2967.31Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD  +LSFV +TLQKF ELL L AN+ KSSIFV G SNE AS +AAS+ FVLGN  +RYLGLPLL+GRL  NDC PLIQ I SR+R W  RV+S+
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
        V RL
Subjt:  VSRL
A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein2.1e-2865.05Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC+AD  +LSFV +TLQKF ELLGL+AN+ K SIFV G +NE AS LAA++ F+LGN  +RYL LPLL+GRLR +DC PLIQ I SR+R W ARV+SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSR
          R
Subjt:  VSR
A0A5A7V2L9 Putative reverse transcriptase2.4e-2966.35Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD S+L F+ + LQKF EL GLF N+ K+S+FV GV++E AS LAAS+ FVLGN  +RYLGLPLLSGRLR +DC PLIQ I SR+R WFARV SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
          RL
Subjt:  VSRL
A0A5A7VHU9 F17F8.51.9e-2968.27Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD  +LSF+ + LQKF EL GLF N+RKSSIFV  VSNEAAS LAAS+ FV GN  +RYLGLPLL GRLR NDC PLIQ + SR+R W A+V+SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
        V RL
Subjt:  VSRL
A0A5D3CLU1 Non-LTR retroelement reverse transcriptase-like protein7.8e-2864.42Show/hide
Query:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF
        MIFC AD  ++ F+ + LQKF EL GLFAN RKS IFV GV+NE AS LAA + FV GN  +RYLGLPLL+GRLR NDC P+IQ I SR+R W ARV+SF
Subjt:  MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSF

Query:  VSRL
          RL
Subjt:  VSRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.7e-0637.31Show/hide
Query:  VTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSFVSRL
        + GV +   + +  S  F  G   +RYLGLPLL+ ++  +D  PL++ I  R+  W AR +SF  RL
Subjt:  VTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSFVSRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTTTGTATTGCTGATAATTCCACTCTGAGTTTTGTTTGTGATACTCTTCAAAAGTTTAGTGAGCTTTTGGGTTTGTTTGCTAATATTAGGAAAAGCTCTATTTT
TGTTACGGGGGTTAGTAATGAGGCTGCTTCTAGTCTGGCTGCCAGTTTGGATTTTGTTCTTGGAAACCCCCATATTCGCTATCTAGGGCTTCCTTTACTTTCTGGTAGGT
TACGTCTTAATGATTGTGTGCCTCTTATTCAACATATTATTAGTCGGGTTCGTTTTTGGTTTGCTAGAGTTGTATCTTTTGTTAGTAGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTTTGTATTGCTGATAATTCCACTCTGAGTTTTGTTTGTGATACTCTTCAAAAGTTTAGTGAGCTTTTGGGTTTGTTTGCTAATATTAGGAAAAGCTCTATTTT
TGTTACGGGGGTTAGTAATGAGGCTGCTTCTAGTCTGGCTGCCAGTTTGGATTTTGTTCTTGGAAACCCCCATATTCGCTATCTAGGGCTTCCTTTACTTTCTGGTAGGT
TACGTCTTAATGATTGTGTGCCTCTTATTCAACATATTATTAGTCGGGTTCGTTTTTGGTTTGCTAGAGTTGTATCTTTTGTTAGTAGATTGTAA
Protein sequenceShow/hide protein sequence
MIFCIADNSTLSFVCDTLQKFSELLGLFANIRKSSIFVTGVSNEAASSLAASLDFVLGNPHIRYLGLPLLSGRLRLNDCVPLIQHIISRVRFWFARVVSFVSRL