| GenBank top hits | e value | %identity | Alignment |
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| AAO73521.1 gag-pol polyprotein [Glycine max] | 3.4e-64 | 73.46 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
+MY + + P LVGYCDADWAGS DDRKSTSG CF+LGNNLISW SKKQNCVSLSTAEAE IAAGS C+QL+WMK ML EY +QD MTLYCDNMS I+IS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVC
KNP+QHSRTKHIDIRHH+I++LV+DKVI H+ + QIADIFTK LDA+ FE LR LG+C
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVC
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| KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 9.5e-83 | 91.46 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYDTTP LVGYCDADWAGS DDRKSTSG CFFLGNNLISWLSKKQNCVSLST EAE IAAGS CTQLIWMKNMLHEYGFDQDTMTLYCDN S IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCRT
KNP+QHSRTKHIDIRHHFI+ELVEDKVIK DHIRSNLQ+ DIFTKPLDASSFEYLR GLGVCRT
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCRT
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| KAA0056181.1 uncharacterized protein E6C27_scaffold431G00070 [Cucumis melo var. makuwa] | 3.1e-65 | 86.39 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYD TPTL GYCDADWAGS DDRKSTSG CFFLGNNLIS LSKKQN VSLS AEAE IAAGS CTQLIWMKNMLHEY FDQDTM LYCDNMS IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
KN +QHSRTK+IDIRHHFI+ELVEDKVIK DHIRSNLQ+ DIFT PL
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
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| TYK03343.1 uncharacterized protein E5676_scaffold206G00060 [Cucumis melo var. makuwa] | 3.1e-65 | 86.39 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYD TPTL GYCDADWAGS DDRKSTSG CFFLGNNLIS LSKKQN VSLS AEAE IAAGS CTQLIWMKNMLHEY FDQDTM LYCDNMS IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
KN +QHSRTK+IDIRHHFI+ELVEDKVIK DHIRSNLQ+ DIFT PL
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
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| TYK23188.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.4e-65 | 85.42 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYDTTPTLVGYCDADWAG DDRKSTSG CFFLGNNLI WLSKKQNCVSLST EAE I AGS CTQLIWM+N+L EYGFDQ T+TLY DNMS IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFT
KNP+QHSR KHIDIRHHFI+ELVEDKVI+ DHIRSNLQ+ADIFT
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7URM6 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.5e-65 | 86.39 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYD TPTL GYCDADWAGS DDRKSTSG CFFLGNNLIS LSKKQN VSLS AEAE IAAGS CTQLIWMKNMLHEY FDQDTM LYCDNMS IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
KN +QHSRTK+IDIRHHFI+ELVEDKVIK DHIRSNLQ+ DIFT PL
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
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| A0A5D3BUJ1 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.5e-65 | 86.39 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYD TPTL GYCDADWAGS DDRKSTSG CFFLGNNLIS LSKKQN VSLS AEAE IAAGS CTQLIWMKNMLHEY FDQDTM LYCDNMS IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
KN +QHSRTK+IDIRHHFI+ELVEDKVIK DHIRSNLQ+ DIFT PL
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPL
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| A0A5D3DI97 Gag-pol polyprotein | 1.1e-65 | 85.42 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYDTTPTLVGYCDADWAG DDRKSTSG CFFLGNNLI WLSKKQNCVSLST EAE I AGS CTQLIWM+N+L EYGFDQ T+TLY DNMS IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFT
KNP+QHSR KHIDIRHHFI+ELVEDKVI+ DHIRSNLQ+ADIFT
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFT
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| A0A5D3DLL1 Gag-pol polyprotein | 4.6e-83 | 91.46 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
MMYSYDTTP LVGYCDADWAGS DDRKSTSG CFFLGNNLISWLSKKQNCVSLST EAE IAAGS CTQLIWMKNMLHEYGFDQDTMTLYCDN S IDIS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCRT
KNP+QHSRTKHIDIRHHFI+ELVEDKVIK DHIRSNLQ+ DIFTKPLDASSFEYLR GLGVCRT
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCRT
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| Q84VI4 Gag-pol polyprotein | 1.6e-64 | 73.46 | Show/hide |
Query: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
+MY + + P LVGYCDADWAGS DDRKSTSG CF+LGNNLISW SKKQNCVSLSTAEAE IAAGS C+QL+WMK ML EY +QD MTLYCDNMS I+IS
Subjt: MMYSYDTTPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDIS
Query: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVC
KNP+QHSRTKHIDIRHH+I++LV+DKVI H+ + QIADIFTK LDA+ FE LR LG+C
Subjt: KNPIQHSRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVC
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.1e-28 | 43.79 | Show/hide |
Query: LVGYCDADWAGSGDDRKSTSGSCFFLGN-NLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFD-QDTMTLYCDNMSVIDISKNPIQHSR
++GY D+DWAGS DRKST+G F + + NLI W +K+QN V+ S+ EAE +A + +W+K +L ++ + +Y DN I I+ NP H R
Subjt: LVGYCDADWAGSGDDRKSTSGSCFFLGN-NLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFD-QDTMTLYCDNMSVIDISKNPIQHSR
Query: TKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGV
KHIDI++HF +E V++ VI ++I + Q+ADIFTKPL A+ F LR LG+
Subjt: TKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGV
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| P0CV72 Secreted RxLR effector protein 161 | 6.5e-10 | 46.97 | Show/hide |
Query: TPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWM
T LVGY DADWAG + R+STSG F L +SW SKKQ V+LS+ E E +A + +W+
Subjt: TPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.2e-33 | 46.41 | Show/hide |
Query: PTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDISKNPIQHSR
P L GY DAD AG D+RKS++G F ISW SK Q CV+LST EAE IAA ++IW+K L E G Q +YCD+ S ID+SKN + H+R
Subjt: PTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFDQDTMTLYCDNMSVIDISKNPIQHSR
Query: TKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGV
TKHID+R+H+I+E+V+D+ +K I +N AD+ TK + + FE + +G+
Subjt: TKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.5e-25 | 38.85 | Show/hide |
Query: TPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFD-QDTMTLYCDNMSVIDISKNPIQH
T +L Y DADWAG DD ST+G +LG++ ISW SKKQ V S+ EAE + + +++ W+ ++L E G +YCDN+ + NP+ H
Subjt: TPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFD-QDTMTLYCDNMSVIDISKNPIQH
Query: SRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCR
SR KHI I +HFI+ V+ ++ H+ ++ Q+AD TKPL ++F+ +GV R
Subjt: SRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-24 | 38.22 | Show/hide |
Query: TPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFD-QDTMTLYCDNMSVIDISKNPIQH
T +L Y DADWAG DD ST+G +LG++ ISW SKKQ V S+ EAE + + ++L W+ ++L E G +YCDN+ + NP+ H
Subjt: TPTLVGYCDADWAGSGDDRKSTSGSCFFLGNNLISWLSKKQNCVSLSTAEAECIAAGSCCTQLIWMKNMLHEYGFD-QDTMTLYCDNMSVIDISKNPIQH
Query: SRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCR
SR KHI + +HFI+ V+ ++ H+ ++ Q+AD TKPL +F+ +GV +
Subjt: SRTKHIDIRHHFIQELVEDKVIKFDHIRSNLQIADIFTKPLDASSFEYLRVGLGVCR
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