; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0229761 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0229761
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionbinding partner of ACD11 1-like
Genome locationCMiso1.1chr08:25190635..25196358
RNA-Seq ExpressionCmc08g0229761
SyntenyCmc08g0229761
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08404.1 binding partner of ACD11 1-like isoform X2 [Cucumis melo var. makuwa]4.4e-124100Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

XP_004149115.1 binding partner of ACD11 1 isoform X1 [Cucumis sativus]2.4e-12295.98Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        VNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKT
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        SKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

XP_008441995.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]7.6e-12492.91Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ------------
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ------------

Query:  -------DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
               DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
Subjt:  -------DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR

Query:  AAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        AAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  AAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

XP_008441996.1 PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo]2.5e-127100Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

XP_011653468.1 binding partner of ACD11 1 isoform X2 [Cucumis sativus]2.5e-11995.51Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        VNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKT
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKES
        SKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNLTSK S
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKES

TrEMBL top hitse value%identityAlignment
A0A0A0KYL6 RRM domain-containing protein1.2e-12295.98Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIALLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        VNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKT
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        SKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

A0A1S3B5B6 binding partner of ACD11 1-like isoform X13.7e-12492.91Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ------------
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ------------

Query:  -------DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
               DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR
Subjt:  -------DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTR

Query:  AAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        AAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  AAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

A0A1S3B5F3 binding partner of ACD11 1-like isoform X21.2e-127100Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

A0A5A7V2T9 Binding partner of ACD11 1-like isoform X13.6e-11987.73Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ------------
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ------------

Query:  ----------------------DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
                              DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  ----------------------DSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

A0A5D3CB19 Binding partner of ACD11 1-like isoform X22.1e-124100Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.6e-0723.01Show/hide
Query:  VQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMYVNRAQEV
        V V ++S   TE++I++FFSF G++ +I  + + GE++TA + F  P A + ALLL  A +    + I+  +        Q       + +        +
Subjt:  VQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMYVNRAQEV

Query:  VANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTAS
        ++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     FA   KL+ T S V T  +    
Subjt:  VANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTAS

Query:  AAWLNGAFGKVAKAGQAAGTKTREKF
         A           AG +AG K +  +
Subjt:  AAWLNGAFGKVAKAGQAAGTKTREKF

Q9LFD5 Binding partner of ACD11 12.0e-5047.03Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH----VPRREMQDSGSQPSS
        M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ+V I    N+     P  E Q SG++   
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH----VPRREMQDSGSQPSS

Query:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS
            V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V+++T++   AAE+ +S  GS
Subjt:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        AV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.2e-5447.03Show/hide
Query:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH------VPRREMQDSGSQPSSGKMY
        TV+V +VS  AT+R++ EFFSFSG+I ++E Q E   ++ A+VTF+D +  E A+LLSGATIVD +V +S   ++      +   E +DS   P +G   
Subjt:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH------VPRREMQDSGSQPSSGKMY

Query:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT
        + +A++VV+++LAKG ++G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQ   VS+KT++AI AAE+ +S+ GSA+  
Subjt:  VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKT

Query:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
        ++YV   A W+ GAF KVAKA +  G K +EK  +A
Subjt:  SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 11.4e-5147.03Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH----VPRREMQDSGSQPSS
        M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ+V I    N+     P  E Q SG++   
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH----VPRREMQDSGSQPSS

Query:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS
            V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V+++T++   AAE+ +S  GS
Subjt:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        AV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 11.1e-5147.03Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH----VPRREMQDSGSQPSS
        M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ+V I    N+     P  E Q SG++   
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENH----VPRREMQDSGSQPSS

Query:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS
            V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V+++T++   AAE+ +S  GS
Subjt:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        AV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein4.9e-8968.32Show/hide
Query:  TRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRRE--------------MQDS
        TR+VQV +VS+LATEREI+EFFSFSG+IEHIEIQ E G+SR AFVTF DPKALEIALLLSGATIVDQ V+I+  EN+V RRE              +Q+S
Subjt:  TRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRRE--------------MQDS

Query:  GSQ-----PSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIF
         +Q       + + YV++AQ+VVA VLAKGS +GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQ L VSDKT AAIF
Subjt:  GSQ-----PSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIF

Query:  AAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV
        AAERKL+DTGSAVK+S+YVTA AAW +GAF KVA+ GQ AG+KT+EKF+LA+SN++SK++P+
Subjt:  AAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-5145.02Show/hide
Query:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQ--TVSISPVENHVP--------RREMQDSGSQPSS
        TV+V +VS  ATER++ EFFSFSG+I ++E Q E   S+ A+VTF+D +  E A+LL+G+TIVD   TV++SP     P         +E   S S    
Subjt:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQ--TVSISPVENHVP--------RREMQDSGSQPSS

Query:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS
              +A++VV+ +++KG V+G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQ   V++KT++AI AAE+ +S+ GS
Subjt:  GKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGS

Query:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV
        A+  ++YV   A W+ GAF +V+KA +  G K +EK  LA      K+  V
Subjt:  AVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGAGAAATCGAACACATTGAGAT
TCAATGTGAACAAGGGGAATCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATCGTAGATCAGACTGTGA
GCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGATTCTGGAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAAT
GTGCTTGCTAAAGGTTCAGTAATTGGACAAGATGCCATGAACAAAGCGAAGGCATTTGACGAAAAGCATCGGCTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGA
CAGAAGGGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCTGATAAAACAAGGGCTGCAA
TCTTCGCAGCTGAGAGGAAACTCAGTGATACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGTTAAATGGTGCATTTGGCAAGGTCGCAAAA
GCAGGGCAGGCAGCAGGAACGAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
GGTGTAAAATTCACTTTGCCATAATATTAAATTTTGGCCTTTTTTTTAAGAAGGAAAGCACAGTTTGATGCCATACTTAATTTCTTGCTTTTTATCTCTCCCTCGCTTTG
AAGAGTGATTCTTTCTTTCAAATTGCTTCCAACCTCTACAACTTCCTCTCTCTCCCTCTCTCTCCCTCTCTTCAAGAATTTCTTCAATCCTTAGCTATGCAGTCTCAGAC
TCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGAGAAATCGAACACATTGAGATTCAATGTGAACAAG
GGGAATCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATCGTAGATCAGACTGTGAGCATATCTCCTGTT
GAAAATCATGTACCAAGAAGAGAAATGCAGGATTCTGGAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAATGTGCTTGCTAAAGG
TTCAGTAATTGGACAAGATGCCATGAACAAAGCGAAGGCATTTGACGAAAAGCATCGGCTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGC
TGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCTGATAAAACAAGGGCTGCAATCTTCGCAGCTGAG
AGGAAACTCAGTGATACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGTTAAATGGTGCATTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGC
AGGAACGAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTAATCTTAAAACTTTGGCTTCAAGAAACTCAGTTGGC
TTGGCTGCTTCTATTTGTAATGAGTTTCTTTTCATTCTATTTCGTCAGGTTATTTTTTCTTCAGGATTTTGCTCTACTACTACTACTATTATTATTATTATCTGTATCTT
TTTTTTTTTTTTTTAATATTCATATTCTTTAACTAAACTATAAGGGTGTTTGGCTGATCAGAATTTTGTATTTGTAAGATTTATTATGGAATTGTAGAGAAAATCCAATT
ATTATTTATCTTATACTCTTATTCTTTATTTGTTTAGGATTATTATGGGTTGTCTTGTGGCTCAGCTTGCTTACCATATTGCTTGGGTGGGTCCGTTCTAGTTTTTAGGA
GGCTATCGAGTTATTATTATTATTATTGGTGGTTATTATAGTTTGTGGGTTAATAAAATGAGTGTTATTGTAGGGTGTCTAT
Protein sequenceShow/hide protein sequence
MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMYVNRAQEVVAN
VLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAK
AGQAAGTKTREKFHLAMSNLTSKESPVVA