| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025735.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.2e-183 | 100 | Show/hide |
Query: MIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQG
MIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQG
Subjt: MIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQG
Query: YSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISH
YSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISH
Subjt: YSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISH
Query: KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
Subjt: KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
Query: HHEFAAPITP
HHEFAAPITP
Subjt: HHEFAAPITP
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| KAA0036855.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.2e-149 | 79.39 | Show/hide |
Query: KWNKSIRGTHMIWRVK---------TSEKCKVAFT-TIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEV
+++ S RG + VK T CK T T+Q VDAWYFDSGCSRHMTGNRSFFTELEEC H TF DGAKG+IIAKGNI+KSNLP LNEV
Subjt: KWNKSIRGTHMIWRVK---------TSEKCKVAFT-TIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEV
Query: RYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLD
RY+DGLKANLISISQ+CDQGYSVNFNNTG VVT+KNNQVFMSGRR+ +NCY+WSSN SNICHLTK DQTWLWHRKLGHIS+RSLDKVIRNEAVV IPSLD
Subjt: RYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLD
Query: INGKFFCGDCQVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISS
INGKFFCG+CQVGK+TK SH+ LKECYTI V ELLHL+LMG MQTESLGGKKYVLVVVDDYS+FTWV FLK K DTVKLCISLCLNLQREKG+KIIRI S
Subjt: INGKFFCGDCQVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISS
Query: DHGKEFDNEDLNNFCQSKGIHHEFAAPITP
DHGKEFDNEDLNN CQ++GIHHEFAAPITP
Subjt: DHGKEFDNEDLNNFCQSKGIHHEFAAPITP
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| KAA0059174.1 F5J5.1 [Cucumis melo var. makuwa] | 3.2e-159 | 83.44 | Show/hide |
Query: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
K N ++RGTHMIWRVKTSEKC VAFT +QT VDAWYFDSGCSRHMT NRSFFTELEEC S HV F+DGAKG+IIAKGNI+KSNLPCLN+VRY+DGLK NL
Subjt: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
Query: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
IS SQ+CDQGYSVNFNNTGCVVT+KNNQVF+SG R+ DNCYHWSSN SNICHLTK QTWLWHRKLGHIS+RSLDKVIRNEA++ IPSLDINGKFFCGDC
Subjt: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
Query: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
QVGK+TK SH+ L ECYTI ELLHLDL+ LMQ ESLGGKKYV VVVDDYSRFTWV FLK KSD VKLCISLCLNLQREKG+KIIRI SDHGK+FDNE+
Subjt: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
Query: LNNFCQSKGIHHEFAAPITP
LNNFCQ++GIHHEFAAPITP
Subjt: LNNFCQSKGIHHEFAAPITP
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| TYK19345.1 F5J5.1 [Cucumis melo var. makuwa] | 4.7e-158 | 83.12 | Show/hide |
Query: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
K N ++RGTHMIWRVKTSEKC VAFT +QT VDAWYFDSGCSRHMT NRSFFTELEEC S HV F+DGAKG+IIAKGNI+KSNLP LN+VRY+DGLK NL
Subjt: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
Query: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
IS SQ+CDQGYSVNFNNTGCVVT+KNNQVF+SG R+ DNCYHWSSN SNICHLTK QTWLWHRKLGHIS+RSLDKVIRNEA++ IPSLDINGKFFCGDC
Subjt: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
Query: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
QVGK+TK SH+ L ECYTI ELLHLDL+ LMQ ESLGGKKYV VVVDDYSRFTWV FLK KSD VKLCISLCLNLQREKG+KIIRI SDHGK+FDNE+
Subjt: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
Query: LNNFCQSKGIHHEFAAPITP
LNNFCQ++GIHHEFAAPITP
Subjt: LNNFCQSKGIHHEFAAPITP
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| TYK26041.1 gag/pol polyprotein [Cucumis melo var. makuwa] | 6.1e-158 | 84.98 | Show/hide |
Query: GTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQIC
GTH+IWRVKTS+KC VAF T+QT VDAWYFDSGCSRHMTGNRSFFTELEEC S HVTF DGAKG+IIAKGN++KSNLP +NEVRY+DGLK NLIS+SQ+C
Subjt: GTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQIC
Query: DQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTK
DQGYSVNFNNT CV TDKNNQVF+SGRR+ +NC HWSSN SNICHLTK DQTWLWHRKLGHIS+RSLDKVIRN+AVV IPSLDINGKFFCGDC+VGK+TK
Subjt: DQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTK
Query: ISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQS
ISH+ LKECYTIRV ELLHLDL+G M+TESLG KKYVLVVVDDYSRFT V FLKGKSDTVKLCISL LNLQREKG+KIIRI SDHGKEFDNEDLNNFCQ+
Subjt: ISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQS
Query: KGIHHEFAAPITP
+GIHHEF APITP
Subjt: KGIHHEFAAPITP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMR2 Gag-pol polyprotein | 1.6e-183 | 100 | Show/hide |
Query: MIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQG
MIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQG
Subjt: MIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQG
Query: YSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISH
YSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISH
Subjt: YSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISH
Query: KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
Subjt: KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
Query: HHEFAAPITP
HHEFAAPITP
Subjt: HHEFAAPITP
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| A0A5A7UVR7 F5J5.1 | 1.6e-159 | 83.44 | Show/hide |
Query: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
K N ++RGTHMIWRVKTSEKC VAFT +QT VDAWYFDSGCSRHMT NRSFFTELEEC S HV F+DGAKG+IIAKGNI+KSNLPCLN+VRY+DGLK NL
Subjt: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
Query: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
IS SQ+CDQGYSVNFNNTGCVVT+KNNQVF+SG R+ DNCYHWSSN SNICHLTK QTWLWHRKLGHIS+RSLDKVIRNEA++ IPSLDINGKFFCGDC
Subjt: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
Query: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
QVGK+TK SH+ L ECYTI ELLHLDL+ LMQ ESLGGKKYV VVVDDYSRFTWV FLK KSD VKLCISLCLNLQREKG+KIIRI SDHGK+FDNE+
Subjt: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
Query: LNNFCQSKGIHHEFAAPITP
LNNFCQ++GIHHEFAAPITP
Subjt: LNNFCQSKGIHHEFAAPITP
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| A0A5D3BA69 Gag-pol polyprotein | 2.5e-149 | 79.39 | Show/hide |
Query: KWNKSIRGTHMIWRVK---------TSEKCKVAFT-TIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEV
+++ S RG + VK T CK T T+Q VDAWYFDSGCSRHMTGNRSFFTELEEC H TF DGAKG+IIAKGNI+KSNLP LNEV
Subjt: KWNKSIRGTHMIWRVK---------TSEKCKVAFT-TIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEV
Query: RYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLD
RY+DGLKANLISISQ+CDQGYSVNFNNTG VVT+KNNQVFMSGRR+ +NCY+WSSN SNICHLTK DQTWLWHRKLGHIS+RSLDKVIRNEAVV IPSLD
Subjt: RYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLD
Query: INGKFFCGDCQVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISS
INGKFFCG+CQVGK+TK SH+ LKECYTI V ELLHL+LMG MQTESLGGKKYVLVVVDDYS+FTWV FLK K DTVKLCISLCLNLQREKG+KIIRI S
Subjt: INGKFFCGDCQVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISS
Query: DHGKEFDNEDLNNFCQSKGIHHEFAAPITP
DHGKEFDNEDLNN CQ++GIHHEFAAPITP
Subjt: DHGKEFDNEDLNNFCQSKGIHHEFAAPITP
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| A0A5D3D755 F5J5.1 | 2.3e-158 | 83.12 | Show/hide |
Query: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
K N ++RGTHMIWRVKTSEKC VAFT +QT VDAWYFDSGCSRHMT NRSFFTELEEC S HV F+DGAKG+IIAKGNI+KSNLP LN+VRY+DGLK NL
Subjt: KWNKSIRGTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANL
Query: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
IS SQ+CDQGYSVNFNNTGCVVT+KNNQVF+SG R+ DNCYHWSSN SNICHLTK QTWLWHRKLGHIS+RSLDKVIRNEA++ IPSLDINGKFFCGDC
Subjt: ISISQICDQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDC
Query: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
QVGK+TK SH+ L ECYTI ELLHLDL+ LMQ ESLGGKKYV VVVDDYSRFTWV FLK KSD VKLCISLCLNLQREKG+KIIRI SDHGK+FDNE+
Subjt: QVGKKTKISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNED
Query: LNNFCQSKGIHHEFAAPITP
LNNFCQ++GIHHEFAAPITP
Subjt: LNNFCQSKGIHHEFAAPITP
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| A0A5D3DQT9 Gag/pol polyprotein | 3.0e-158 | 84.98 | Show/hide |
Query: GTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQIC
GTH+IWRVKTS+KC VAF T+QT VDAWYFDSGCSRHMTGNRSFFTELEEC S HVTF DGAKG+IIAKGN++KSNLP +NEVRY+DGLK NLIS+SQ+C
Subjt: GTHMIWRVKTSEKCKVAFTTIQTPVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQIC
Query: DQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTK
DQGYSVNFNNT CV TDKNNQVF+SGRR+ +NC HWSSN SNICHLTK DQTWLWHRKLGHIS+RSLDKVIRN+AVV IPSLDINGKFFCGDC+VGK+TK
Subjt: DQGYSVNFNNTGCVVTDKNNQVFMSGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTK
Query: ISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQS
ISH+ LKECYTIRV ELLHLDL+G M+TESLG KKYVLVVVDDYSRFT V FLKGKSDTVKLCISL LNLQREKG+KIIRI SDHGKEFDNEDLNNFCQ+
Subjt: ISHKSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQS
Query: KGIHHEFAAPITP
+GIHHEF APITP
Subjt: KGIHHEFAAPITP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.0e-18 | 23.73 | Show/hide |
Query: DSGCSRHMTGNRSFFTE-------LEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKNNQVF
DSG S H+ + S +T+ L+ + F K I+ N ++ L +V + NL+S+ ++ + G S+ F+ +G ++ V
Subjt: DSGCSRHMTGNRSFFTE-------LEECTSVHVTFEDGAKGRIIAKGNINKSNLPCLNEVRYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKNNQVF
Query: M-SGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVD---IPSLDINGKFFCGDCQVGKKTKISHKSLKE-CYTIRVFELL
SG ++ + S N H + LWH + GHIS L ++ R D + +L+++ + C C GK+ ++ K LK+ + R ++
Subjt: M-SGRRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVD---IPSLDINGKFFCGDCQVGKKTKISHKSLKE-CYTIRVFELL
Query: HLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGIHHEFAAPITP
H D+ G + +L K Y ++ VD ++ + +K KSD + + K++ + D+G+E+ + ++ FC KGI + P TP
Subjt: HLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGIHHEFAAPITP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.5e-26 | 27.57 | Show/hide |
Query: PVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNI-NKSNLPC---LNEVRYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKN
P W D+ S H T R F V + + +I G+I K+N+ C L +VR++ L+ NLIS + GY F N +T K
Subjt: PVDAWYFDSGCSRHMTGNRSFFTELEECTSVHVTFEDGAKGRIIAKGNI-NKSNLPC---LNEVRYMDGLKANLISISQICDQGYSVNFNNTGCVVTDKN
Query: NQVFMSG-------RRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISHKSLKECYTI
+ V G R + C + + + + LWH+++GH+S + L + + + + C C GK+ ++S ++ E +
Subjt: NQVFMSG-------RRQTDNCYHWSSNSSNICHLTKTDQTWLWHRKLGHISMRSLDKVIRNEAVVDIPSLDINGKFFCGDCQVGKKTKISHKSLKECYTI
Query: RVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGIHHEFAAPIT
+ +L++ D+ G M+ ES+GG KY + +DD SR WV LK K ++ ++RE G+K+ R+ SD+G E+ + + +C S GI HE P T
Subjt: RVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGIHHEFAAPIT
Query: P
P
Subjt: P
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 1.2e-12 | 28.3 | Show/hide |
Query: LWHRKLGHISMRSLDKVIRNEAVVDIPSLDIN----GKFFCGDCQVGKKTKISH---KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSR
L HR LGH + RS+ K ++ AV + DI + C DC +GK TK H LK + F+ LH D+ G + Y + D+ +R
Subjt: LWHRKLGHISMRSLDKVIRNEAVVDIPSLDIN----GKFFCGDCQVGKKTKISH---KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSR
Query: FTWV--LFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
F WV L + + + + S+ ++ + +++ I D G E+ N+ L+ F ++GI
Subjt: FTWV--LFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
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| Q12472 Transposon Ty2-DR1 Gag-Pol polyprotein | 1.2e-12 | 28.3 | Show/hide |
Query: LWHRKLGHISMRSLDKVIRNEAVVDIPSLDIN----GKFFCGDCQVGKKTKISH---KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSR
L HR LGH + RS+ K ++ AV + DI + C DC +GK TK H LK + F+ LH D+ G + Y + D+ +R
Subjt: LWHRKLGHISMRSLDKVIRNEAVVDIPSLDIN----GKFFCGDCQVGKKTKISH---KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSR
Query: FTWV--LFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
F WV L + + + + S+ ++ + +++ I D G E+ N+ L+ F ++GI
Subjt: FTWV--LFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 1.2e-12 | 28.3 | Show/hide |
Query: LWHRKLGHISMRSLDKVIRNEAVVDIPSLDIN----GKFFCGDCQVGKKTKISH---KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSR
L HR LGH + RS+ K ++ AV + DI + C DC +GK TK H LK + F+ LH D+ G + Y + D+ +R
Subjt: LWHRKLGHISMRSLDKVIRNEAVVDIPSLDIN----GKFFCGDCQVGKKTKISH---KSLKECYTIRVFELLHLDLMGLMQTESLGGKKYVLVVVDDYSR
Query: FTWV--LFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
F WV L + + + + S+ ++ + +++ I D G E+ N+ L+ F ++GI
Subjt: FTWV--LFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNEDLNNFCQSKGI
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