CuGenDBv2

Gene ID	Cmc08g0230411
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein TIC 214
Genome location	CMiso1.1chr08:26008727..26008939
RNA-Seq Expression	Cmc08g0230411
Synteny	Cmc08g0230411
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0009706 - chloroplast inner membrane (cellular component)
InterPro domains	IPR008896 - Protein TIC214

Homology

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GenBank top hits

e value

%identity

Alignment

ASY96394.1 Ycf1 [Cucumis melo subsp. agrestis]

4.4e-29

98.57

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

ASY96481.1 Ycf1 [Cucumis melo subsp. agrestis]

4.4e-29

98.57

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

ASY96568.1 Ycf1 [Cucumis melo subsp. agrestis]

4.4e-29

98.57

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

ASY96828.1 Ycf1 [Cucumis melo var. momordica]

4.4e-29

98.57

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

ASY96829.1 Ycf1 [Cucumis melo var. momordica]

4.4e-29

98.57

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU51 Protein TIC 214

2.1e-29

98.57

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

A0A1S4EU70 Protein TIC 214

2.1e-29

98.57

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

A0A249RZD8 Protein TIC 214

2.1e-29

98.57

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

A0A249RZN8 Protein TIC 214

2.1e-29

98.57

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

A0A286NG49 Protein TIC 214

2.1e-29

98.57

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

SwissProt top hits

e value

%identity

Alignment

A4GYX4 Protein TIC 214

1.9e-30

95.71

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLN+LIFQLFNHFILPSSMLVRLVNI MFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

Q09WW0 Protein TIC 214

2.4e-30

94.29

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLN+LIFQLFNHFILPSSMLVRLVNI MFRCNNK+LFVTSSFVGWLIGHILFMKWVGL+LV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

Q0G9Q4 Protein TIC 214

7.1e-30

92.86

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLN+LIFQLFNHFILPSSML RLVNI MFRCNNK+LFVTSSFVGWLIGHILFMKWVGL+LV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

Q14FA0 Protein TIC 214

1.9e-30

95.71

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLN+LIFQLFNHFILPSSMLVRLVNI MFRCNNK+LFVTSSFVGWLIGHILFMKWVGLILV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

Q68RU8 Protein TIC 214

7.1e-30

92.86

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNLSIQCVFLN+LIFQLFNHFILPSSML RLVNI MFRCNNK+LFVTSSFVGWLIGHILFMKWVGL+LV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

Arabidopsis top hits

e value

%identity

Alignment

AT2G07739.1 Ycf1 protein

1.1e-17

71.88

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKW
        MRNL IQCVF N+LIF+LFNH ILPSSML RLVNI MFRCNNK+LFVTSSFV  +   +L ++W
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKW

ATCG01000.1 Ycf1 protein

1.9e-30

91.43

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNL IQCVFLN+LIFQLFNHFILPSSML RLVNI MFRCNNK+LFVTSSFVGWLIGHILFMKWVGL+LV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

ATCG01130.1 Ycf1 protein

1.9e-30

91.43

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Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV
        MRNL IQCVFLN+LIFQLFNHFILPSSML RLVNI MFRCNNK+LFVTSSFVGWLIGHILFMKWVGL+LV
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

ATMG00370.1 Ycf1 protein

1.1e-17

71.88

Show/hide

Query:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKW
        MRNL IQCVF N+LIF+LFNH ILPSSML RLVNI MFRCNNK+LFVTSSFV  +   +L ++W
Subjt:  MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKW

Sequences

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CDS sequence

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ATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATCATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATT
TCTATGTTTCGATGCAACAACAAGTTGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTC
TAG

mRNA sequence

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Protein sequence

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MRNLSIQCVFLNHLIFQLFNHFILPSSMLVRLVNISMFRCNNKLLFVTSSFVGWLIGHILFMKWVGLILV

Cmc08g0230411 (gene) of Melon (Charmono) v1.1 genome