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Cmc08g0230651 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0230651
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr08:26330307..26342527
RNA-Seq ExpressionCmc08g0230651
SyntenyCmc08g0230651
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]3.7e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
TYK14498.1 MuDR family transposase [Cucumis melo var. makuwa]3.7e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
TYK21187.1 MuDRA-like transposase [Cucumis melo var. makuwa]3.7e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
TYK22454.1 uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]3.7e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
TYK28211.1 MuDR family transposase [Cucumis melo var. makuwa]3.7e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
TrEMBL top hitse value%identityAlignment
A0A5D3C8T8 SWIM-type domain-containing protein1.8e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like1.8e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
A0A5D3DC02 MuDRA-like transposase1.8e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
A0A5D3DFS5 SWIM-type domain-containing protein1.8e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
A0A5D3DX57 MuDR family transposase1.8e-2887.14Show/hide
Query:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
        R +RP+GNHANWKSIGI+ N+LP TFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRN +FPPFLQ
Subjt:  RLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTGTACAGCGACATTGGGGAGCACTCATACATTTGGTGGACAGTGGGATGATACTAGATTAATTCGTCCGATTGGGAACCATGCTAATTGGAAGTCTATTGGGAT
TGACATTAACATGCTACCTCTAACTTTCAAGCGTCGAGCAGGACGACCGCGAAAACAAAGAATACTATCAATTGGCGAGAAGAAAAGTCACTCAAGATGCAGCCATTGTC
ATCGTGCTGGTCACAATCGTAGAAATTACAGATTTCCACCATTTTTACAATGA
mRNA sequenceShow/hide mRNA sequence
TTGAAACCCTTCTTCTCCTCCTCTTACGTGTGCCGCCCCTTCATCTTCTAGTCGCAGTGTGTCGAAGTCGTTGGTGGTTTTTTCCGATTCGAGGGTTGGGTGATACATGT
GCTGTACAGCGACATTGGGGAGCACTCATACATTTGGTGGACAGTGGGATGATACTAGATTAATTCGTCCGATTGGGAACCATGCTAATTGGAAGTCTATTGGGATTGAC
ATTAACATGCTACCTCTAACTTTCAAGCGTCGAGCAGGACGACCGCGAAAACAAAGAATACTATCAATTGGCGAGAAGAAAAGTCACTCAAGATGCAGCCATTGTCATCG
TGCTGGTCACAATCGTAGAAATTACAGATTTCCACCATTTTTACAATGATGTGACATTATGTTTTTTATAATAATCTTTTAGCTTGAGCATATAGAACATTTATTTTGTG
TGTAGTAAATACTTTCTATTTGTTTGACTCAAACCTTTCAATAATA
Protein sequenceShow/hide protein sequence
MCCTATLGSTHTFGGQWDDTRLIRPIGNHANWKSIGIDINMLPLTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNYRFPPFLQ