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Cmc08g0230781 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0230781
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr08:26517695..26517988
RNA-Seq ExpressionCmc08g0230781
SyntenyCmc08g0230781
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037383.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.5e-3581.91Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLY KLVGSLQYLTFTRPDI FSVNRV+QFMHK TVIHFL VK IL+YLCGTPTL INFRKG FSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.4e-3378.72Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDP LYR+LVGSLQYLTFTRPDI+ SVNRV+QFMHKPTVIHF  VK IL+YLCGTPTL I FRKGSFSLQTFCD DWA DT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

TYK06454.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.4e-3379.79Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLYR+LVGSLQYLTFTRPDI+FSVNRV+QFMHKPTVIHF  VK IL+YL GTPTL I FR+GSFSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

XP_016902755.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.4e-3379.79Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLYR+LVGSLQYLTFTRPDI+FSVNRV+QFMHKPTVIHF  VK IL+YL GTPTL I FR+GSFSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

XP_016902988.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]7.5e-3581.91Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLY KLVGSLQYLTFTRPDI FSVNRV+QFMHK TVIHFL VK IL+YLCGTPTL INFRKG FSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

TrEMBL top hitse value%identityAlignment
A0A1S4E432 uncharacterized mitochondrial protein AtMg00810-like3.6e-3581.91Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLY KLVGSLQYLTFTRPDI FSVNRV+QFMHK TVIHFL VK IL+YLCGTPTL INFRKG FSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

A0A1S4E450 uncharacterized mitochondrial protein AtMg00810-like6.8e-3479.79Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLYR+LVGSLQYLTFTRPDI+FSVNRV+QFMHKPTVIHF  VK IL+YL GTPTL I FR+GSFSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

A0A5A7SGQ3 Putative mitochondrial protein6.8e-3479.79Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLYR+LVGSLQYLTFTRPDI+FSVNRV+QFMHKPTVIHF  VK IL+YL GTPTL I FR+GSFSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

A0A5D3BH82 Putative mitochondrial protein3.6e-3581.91Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLY KLVGSLQYLTFTRPDI FSVNRV+QFMHK TVIHFL VK IL+YLCGTPTL INFRKG FSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

A0A5D3C550 Putative mitochondrial protein6.8e-3479.79Show/hide
Query:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD
        D+Y   P  PFNDPSLYR+LVGSLQYLTFTRPDI+FSVNRV+QFMHKPTVIHF  VK IL+YL GTPTL I FR+GSFSLQTFCD DWAGDT D
Subjt:  DVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-0540.79Show/hide
Query:  YRKLVGSLQY-LTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGD
        Y   VGSL Y +  TRPDI+ +V  V++F+  P   H+  VK IL+YL GT    + F      L+ + D D AGD
Subjt:  YRKLVGSLQY-LTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGD

P92519 Uncharacterized mitochondrial protein AtMg008101.4e-1550.6Show/hide
Query:  FNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWAGDT
        + DPS +R +VG+LQYLT TRPDIS++VN V Q MH+PT+  F ++K +L+Y+ GT    +   K S  ++Q FCD DWAG T
Subjt:  FNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWAGDT

P93290 Uncharacterized mitochondrial protein AtMg002402.4e-0438.46Show/hide
Query:  YLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWA
        YLT TRPD++F+VNR++QF           V  +L Y+ GT    + +   S   L+ F D DWA
Subjt:  YLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.2e-1957.83Show/hide
Query:  DPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKG-SFSLQTFCDFDWAGDTFD
        DP+ YR +VGSLQYL FTRPDIS++VNR++QFMH PT  H   +K IL+YL GTP   I  +KG + SL  + D DWAGD  D
Subjt:  DPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKG-SFSLQTFCDFDWAGDTFD

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.0e-1955.42Show/hide
Query:  DPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKG-SFSLQTFCDFDWAGDTFD
        DP+ YR +VGSLQYL FTRPD+S++VNR++Q+MH PT  H+  +K +L+YL GTP   I  +KG + SL  + D DWAGDT D
Subjt:  DPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKG-SFSLQTFCDFDWAGDTFD

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-0840.79Show/hide
Query:  FNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINF-RKGSFSLQTFCD
        F D   YR+L+G L YL  TR DISF+VN+++QF   P + H   V  IL Y+ GT    + +  +    LQ F D
Subjt:  FNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINF-RKGSFSLQTFCD

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.7e-0538.46Show/hide
Query:  YLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWA
        YLT TRPD++F+VNR++QF           V  +L Y+ GT    + +   S   L+ F D DWA
Subjt:  YLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWA

ATMG00810.1 DNA/RNA polymerases superfamily protein9.8e-1750.6Show/hide
Query:  FNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWAGDT
        + DPS +R +VG+LQYLT TRPDIS++VN V Q MH+PT+  F ++K +L+Y+ GT    +   K S  ++Q FCD DWAG T
Subjt:  FNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGS-FSLQTFCDFDWAGDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAATGATGTATACATACCTCAACCATATTCACCATTTAATGATCCATCCCTCTATCGCAAACTAGTTGGTTCCTTGCAATATCTTACATTCACTCGTCCTGATAT
TTCATTCTCTGTAAATCGTGTTAATCAATTCATGCACAAACCAACTGTCATTCATTTCTTGGTAGTCAAATGCATTCTCAAATATCTATGTGGCACTCCAACCCTTGAAA
TAAATTTTCGCAAAGGTTCGTTCTCTCTACAGACCTTTTGTGACTTTGATTGGGCAGGTGATACTTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAATGATGTATACATACCTCAACCATATTCACCATTTAATGATCCATCCCTCTATCGCAAACTAGTTGGTTCCTTGCAATATCTTACATTCACTCGTCCTGATAT
TTCATTCTCTGTAAATCGTGTTAATCAATTCATGCACAAACCAACTGTCATTCATTTCTTGGTAGTCAAATGCATTCTCAAATATCTATGTGGCACTCCAACCCTTGAAA
TAAATTTTCGCAAAGGTTCGTTCTCTCTACAGACCTTTTGTGACTTTGATTGGGCAGGTGATACTTTTGATTGA
Protein sequenceShow/hide protein sequence
MRNDVYIPQPYSPFNDPSLYRKLVGSLQYLTFTRPDISFSVNRVNQFMHKPTVIHFLVVKCILKYLCGTPTLEINFRKGSFSLQTFCDFDWAGDTFD