; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0230911 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0230911
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionHigh mobility group B protein 6
Genome locationCMiso1.1chr08:26863454..26864674
RNA-Seq ExpressionCmc08g0230911
SyntenyCmc08g0230911
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025412.1 high mobility group B protein 6 [Cucumis melo var. makuwa]1.1e-95100Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
        MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML

Query:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_004142680.1 high mobility group B protein 6 [Cucumis sativus]2.8e-9498.43Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
        MQTLHHPLP PRD+PLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP TTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML

Query:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_008463266.1 PREDICTED: high mobility group B protein 6 [Cucumis melo]1.6e-9499.48Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
        MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPN VPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML

Query:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_022978293.1 high mobility group B protein 13-like [Cucurbita maxima]6.1e-8185.49Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP--ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEK
        MQ LH PL +P D+PLKSGRRPLQPKNSLPNPVP+VAK+IKSKPE IQISL  DANKENHPP  A   S+ESCDLSLADELNAVKRK+ERLRL+ ERTE+
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP--ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEK

Query:  MLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        ML+ERD++LELRMKELLQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFVTGF
Subjt:  MLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_038883293.1 uncharacterized protein LOC120074285 [Benincasa hispida]4.1e-8589.34Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP------ATTVSIESCDLSLADELNAVKRKMERLRLDGE
        MQTLHHPL +P+D+PLKSGRRPLQPKNSLPN  PSVAK IKSKPE IQISLSGDANKENHPP       TT SIESCD SLADELNAVKRK+ERLRLDGE
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP------ATTVSIESCDLSLADELNAVKRKMERLRLDGE

Query:  RTEKMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RTE+MLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDS+ FVTGF
Subjt:  RTEKMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

TrEMBL top hitse value%identityAlignment
A0A0A0L063 Uncharacterized protein1.4e-9498.43Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
        MQTLHHPLP PRD+PLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP TTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML

Query:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A1S3CJ78 high mobility group B protein 68.0e-9599.48Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
        MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPN VPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML

Query:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A5A7SJQ2 High mobility group B protein 65.5e-96100Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
        MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML

Query:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A5D3CEI7 High mobility group B protein 68.0e-9599.48Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
        MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPN VPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKML

Query:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  RERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A6J1ISM0 high mobility group B protein 13-like2.9e-8185.49Show/hide
Query:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP--ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEK
        MQ LH PL +P D+PLKSGRRPLQPKNSLPNPVP+VAK+IKSKPE IQISL  DANKENHPP  A   S+ESCDLSLADELNAVKRK+ERLRL+ ERTE+
Subjt:  MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPP--ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEK

Query:  MLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        ML+ERD++LELRMKELLQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFVTGF
Subjt:  MLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01910.1 unknown protein2.3e-2245.91Show/hide
Query:  SGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQR
        SGR+ LQP+N    P    A  +K K        + +  KEN    T++     D SLA+EL+A K+K+ERLR D E TEK+L+ERD  ++L M  LLQR
Subjt:  SGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQR

Query:  SQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV
         + Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++      F   E  D E SV
Subjt:  SQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV

AT5G01910.2 unknown protein8.9e-2247.86Show/hide
Query:  SGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQR
        SGR+ LQP+N    P    A  +K K        + +  KEN    T++     D SLA+EL+A K+K+ERLR D E TEK+L+ERD  ++L M  LLQR
Subjt:  SGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQR

Query:  SQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK
         + Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++
Subjt:  SQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTCTCCACCATCCCTTACCCTCTCCTCGAGATATTCCTCTCAAGTCCGGCCGCCGCCCGCTCCAGCCAAAGAATTCTCTCCCAAATCCTGTCCCTTCCGTTGC
CAAAATCATCAAATCCAAGCCGGAAATCATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAATCATCCGCCGGCAACAACGGTGAGTATTGAGTCATGTGATTTGT
CTCTGGCGGATGAACTGAATGCGGTTAAGAGGAAGATGGAGAGATTGAGATTGGACGGTGAACGAACGGAGAAGATGTTGAGAGAGAGGGATTTGGTTTTGGAGTTACGG
ATGAAGGAACTGTTACAGAGAAGTCAGGAACAGAGAGATCTGGAAATGGAAGTTGATAGGTTATTTAGACTGAAGGAACTTAGATCGTACTGTATGAGGATTTCTCCGAT
TCGAAGTCTCAGAGAGAAAGAACGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATT
CTTCAGAATTCGTAACAGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
TTCAAACCCTAAAAACACAAAATTCCAAATCCTTCACGAAAAGAAAAACTTTCTTTTCCCTTCTATTCTTTTTCTATGATTCCATTTCTTCACTTTCAAACCAATTTCTC
CCATCTCCACTCCACACCAATATGCAAACTCTCCACCATCCCTTACCCTCTCCTCGAGATATTCCTCTCAAGTCCGGCCGCCGCCCGCTCCAGCCAAAGAATTCTCTCCC
AAATCCTGTCCCTTCCGTTGCCAAAATCATCAAATCCAAGCCGGAAATCATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAATCATCCGCCGGCAACAACGGTGA
GTATTGAGTCATGTGATTTGTCTCTGGCGGATGAACTGAATGCGGTTAAGAGGAAGATGGAGAGATTGAGATTGGACGGTGAACGAACGGAGAAGATGTTGAGAGAGAGG
GATTTGGTTTTGGAGTTACGGATGAAGGAACTGTTACAGAGAAGTCAGGAACAGAGAGATCTGGAAATGGAAGTTGATAGGTTATTTAGACTGAAGGAACTTAGATCGTA
CTGTATGAGGATTTCTCCGATTCGAAGTCTCAGAGAGAAAGAACGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTG
GCGAAAACTCCTCGTTGGATTCTTCAGAATTCGTAACAGGTTTTTGAAATCGTTTCTAAACTTTTGTGGATTTGCCCTAATTTTCCGATCATTACTACATCTTGTTCGGG
TTTTCAAAAGTAGAAATTAGAAAAGGAAATGGATGTAATACCTCATTATGATCTTCTTTACGCATAGATGGAAGCTTTTGAGTAGTTGTAATCAATGTGATTCTTCTTCT
TCTTCTTCTTCTTCACTTCAATTAATGTTTGAAAATGAAGAAATTCCAAATCGTGTTGGTGAATTTTTCTCTCGCCCCTCCGTAATCATCATGATCTGTAATGAATTTTG
TGAGTGAGTTTAGGGAGATGGATTGATTCAATTCATGATCGTCAGTTACGCACAAACA
Protein sequenceShow/hide protein sequence
MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELR
MKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF