CuGenDBv2

Gene ID	Cmc08g0236111
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Proliferating cell nuclear antigen
Genome location	CMiso1.1chr08:32449940..32450362
RNA-Seq Expression	Cmc08g0236111
Synteny	Cmc08g0236111
Gene Ontology terms	GO:0006272 - leading strand elongation (biological process) GO:0006275 - regulation of DNA replication (biological process) GO:0006298 - mismatch repair (biological process) GO:0019985 - translesion synthesis (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0043626 - PCNA complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0030337 - DNA polymerase processivity factor activity (molecular function)
InterPro domains	IPR000730 - Proliferating cell nuclear antigen, PCNA IPR022649 - Proliferating cell nuclear antigen, PCNA, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

CBI16018.3 unnamed protein product, partial [Vitis vinifera]

2.4e-39

95.56

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        +ANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSS+LPVVVEYKIAEMGY+RFYLAPKIEEDEDETKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

KAA0045038.1 proliferating cell nuclear antigen [Cucumis melo var. makuwa]

4.3e-44

100

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Query:  FRCKLSANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        FRCKLSANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
Subjt:  FRCKLSANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

XP_008464069.1 PREDICTED: proliferating cell nuclear antigen [Cucumis melo]

2.9e-40

98.89

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        SANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

XP_022148313.1 proliferating cell nuclear antigen [Momordica charantia]

2.4e-39

97.75

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQ
        SANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSS+LPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQ
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQ

XP_031744173.1 proliferating cell nuclear antigen [Cucumis sativus]

6.4e-40

97.78

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        SANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDED+TKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KE56 Proliferating cell nuclear antigen

3.1e-40

97.78

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        SANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDED+TKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

A0A1S3CKM6 Proliferating cell nuclear antigen

1.4e-40

98.89

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        SANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

A0A5A7TQ70 Proliferating cell nuclear antigen

2.1e-44

100

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Query:  FRCKLSANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        FRCKLSANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
Subjt:  FRCKLSANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

A0A5A7V7Z1 Proliferating cell nuclear antigen

1.4e-40

98.89

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        SANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

A5B6U5 Proliferating cell nuclear antigen

1.2e-39

95.56

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        +ANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSS+LPVVVEYKIAEMGY+RFYLAPKIEEDEDETKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

SwissProt top hits

e value

%identity

Alignment

O82134 Proliferating cell nuclear antigen

8.7e-40

91.11

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA
        SANIVCRQNTTVDKPEEAT IEMNEPV+L FALRYMNSFTKATPLS++VTISLS++LPVVVEYKIAEMGYVRFYLAPKIEEDE+ETKPQA
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

O82797 Proliferating cell nuclear antigen

2.3e-40

93.18

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKP
        +ANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRY+NSFTKATPLSNTVTISLSS+LPVVVEYKIAEMGY+RFYLAPKIEEDE+ETKP
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKP

P22177 Proliferating cell nuclear antigen (Fragment)

3.0e-40

92.13

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQ
        +ANIVCRQNT+VDKPEEAT IEMNEPVSLTFALRYMNSFTKATPLSNTVTISLS++LPVVVEYKIAEMGYVRFYLAPKIEEDE++TKPQ
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQ

P24314 Proliferating cell nuclear antigen

5.3e-37

89.41

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDE
        +ANIVCRQNTTVDKP+EAT IEMNEPVSLTFALRY+NSFTKATPLSN VTISLSS+LPVVVEYKIAEMGY+RFYLAPKIEED++E
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDE

Q00268 Proliferating cell nuclear antigen

3.3e-39

90.91

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKP
        +ANIVCRQNTTVDKPEEAT IEMNEPVSLTFALRYMNSFTKA+PLS+TVTISLSS+LPVVVEYKIAEMGY+RFYLAPKIEE+EDE+KP
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKP

Arabidopsis top hits

e value

%identity

Alignment

AT1G07370.1 proliferating cellular nuclear antigen 1

6.6e-35

84.52

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDED
        +ANIV RQNTTVDKPE+A  IEM EPVSL+FALRYMNSFTKATPLS+TVTISLSS+LPVVVEYK+AEMGY+R+YLAPKIEE+ED
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDED

AT2G29570.1 proliferating cell nuclear antigen 2

2.7e-36

84.27

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Query:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQ
        +ANIV RQNTTVDKPE+A  IEMNEPVSL+FALRYMNSFTKATPLS TVTISLSS+LPVVVEYK+AEMGY+R+YLAPKIEE+ED TKP+
Subjt:  SANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQ

Sequences

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CDS sequence

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ATGTACATTATCTTACTAAAATATTTTTGGAATTTCAGATGCAAGCTATCTGCCAATATTGTTTGCAGGCAGAATACCACTGTAGACAAGCCTGAAGAAGCAACAGCTAT
AGAGATGAATGAGCCGGTTTCTTTGACGTTTGCTTTAAGGTATATGAATTCCTTCACTAAGGCAACGCCCCTTTCAAACACGGTCACCATCAGCTTGTCCTCTGACCTAC
CTGTTGTTGTCGAATACAAAATAGCAGAGATGGGATATGTAAGGTTTTACTTGGCTCCCAAAATAGAAGAAGATGAGGATGAGACAAAGCCTCAAGCCTAA

mRNA sequence

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Protein sequence

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MYIILLKYFWNFRCKLSANIVCRQNTTVDKPEEATAIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGYVRFYLAPKIEEDEDETKPQA

Cmc08g0236111 (gene) of Melon (Charmono) v1.1 genome