| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033702.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 9.0e-213 | 83.72 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
+LA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYR+FVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLSKTA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| KAA0056798.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.1e-213 | 88.63 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA GIIRPSVSPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDELHGA+IFSKIDLKS YHQIRVRDEDVKK AFRTHEGHYEFMVM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PF LTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHL+IVFTLLREHSLFANRKKCHFG+E+IEYLGHWVSS GVEAD+EKIRAMLEWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKN+FHWT E T AFEQLK+AMVTL VLALPDFQQ FELETDAS FGLGAVLSQNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS T KEKSVYERELMAIVLAVEKWRH LLGHHFVVFTDQKALRYILEQRELIP GPENK ADALSR+P EAQLNVI +P
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPDS
SILDVKVV +EVQEDDKLKEIFEKVLTDPDS
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPDS
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| TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-213 | 83.95 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYRRFVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS+TA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| TYK23724.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-213 | 83.95 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYRRFVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS+TA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| TYK26407.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-213 | 83.95 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYRRFVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS+TA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SR72 Ty3/gypsy retrotransposon protein | 4.3e-213 | 83.72 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
+LA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYR+FVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLSKTA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| A0A5A7UNX8 Transposon Ty3-I Gag-Pol polyprotein | 5.1e-214 | 88.63 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA GIIRPSVSPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDELHGA+IFSKIDLKS YHQIRVRDEDVKK AFRTHEGHYEFMVM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PF LTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHL+IVFTLLREHSLFANRKKCHFG+E+IEYLGHWVSS GVEAD+EKIRAMLEWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKN+FHWT E T AFEQLK+AMVTL VLALPDFQQ FELETDAS FGLGAVLSQNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS T KEKSVYERELMAIVLAVEKWRH LLGHHFVVFTDQKALRYILEQRELIP GPENK ADALSR+P EAQLNVI +P
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPDS
SILDVKVV +EVQEDDKLKEIFEKVLTDPDS
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPDS
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| A0A5D3DD68 Ty3/gypsy retrotransposon protein | 1.9e-213 | 83.95 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYRRFVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS+TA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| A0A5D3DJA9 Ty3/gypsy retrotransposon protein | 1.9e-213 | 83.95 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYRRFVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS+TA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| A0A5D3DRT3 Ty3/gypsy retrotransposon protein | 1.9e-213 | 83.95 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
MLA+GIIRPS SPFSSPVILVKKKDGGWRFCVDY+ALNRATVPDKFPIPMIDELLDEL GASIFSKIDLKSGYHQIRVRDED+ K AFRTHEGHYEF+VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGLTNAPATFQALMNQVFRPYLRKF+LVFFDDILVYS+DVE+HLEHL++VF LLR+H LFANR+KCHF K+RIEYLGHWVS+KGVEAD+EKI+AM+EWP
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
IP+NI+ELRGFLGLTGYYRRFVANYG IA PLT+LTKKNNF W+ E T AFEQLK AMVTL VLALPDFQ PFE+ETDASG GLGAVL+QNKRPIAYFSQ
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKRPIAYFSQ
Query: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
KLS+TA+EKSVYERELMAIVLAVEKWRH LLGH FVV+TDQKALR+ILEQRE++PG+QKWLMKL+GF FEI YRAGPENK ADALSR+P EA+LN I VP
Subjt: KLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIEAQLNVIVVP
Query: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
S+LD+ V+EKEVQ D+KLK IF++++ DPD
Subjt: SILDVKVVEKEVQEDDKLKEIFEKVLTDPD
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.6e-90 | 44.47 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGG-----WRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHY
ML GIIR S SP++SP+ +V KK +R +DY+ LN TV D+ PIP +DE+L +L + F+ IDL G+HQI + E V K AF T GHY
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGG-----WRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHY
Query: EFMVMPFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRA
E++ MPFGL NAPATFQ MN + RP L K LV+ DDI+V+S ++ HL+ L +VF L + +L KC F K+ +LGH ++ G++ + EKI A
Subjt: EFMVMPFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRA
Query: MLEWPIPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTA--ETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKR
+ ++PIP KE++ FLGLTGYYR+F+ N+ IA P+T+ KKN T E AF++LK + +L +PDF + F L TDAS LGAVLSQ+
Subjt: MLEWPIPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTA--ETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKR
Query: PIAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIE
P++Y S+ L++ S E+EL+AIV A + +RH LLG HF + +D + L ++ ++ + +W +KL F F+I Y G EN VADALSRI +E
Subjt: PIAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIE
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.1e-93 | 44.72 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGG-----WRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHY
ML G+IR S SP++SP +V KK +R +DY+ LN T+PD++PIP +DE+L +L F+ IDL G+HQI + +E + K AF T GHY
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGG-----WRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHY
Query: EFMVMPFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRA
E++ MPFGL NAPATFQ MN + RP L K LV+ DDI+++S + HL + +VFT L + +L KC F K+ +LGH V+ G++ + K++A
Subjt: EFMVMPFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRA
Query: MLEWPIPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWT--AETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKR
++ +PIP KE+R FLGLTGYYR+F+ NY IA P+T KK T E AFE+LKA ++ +L LPDF++ F L TDAS LGAVLSQN
Subjt: MLEWPIPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWT--AETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQNKR
Query: PIAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIE
PI++ S+ L+ S E+EL+AIV A + +RH LLG F++ +D + LR++ +E +++W ++L + F+I Y G EN VADALSRI IE
Subjt: PIAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSRIPIE
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.1e-79 | 41.48 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
+L I PS SP SSPV+LV KKDG +R CVDY+ LN+AT+ D FP+P ID LL + A IF+ +DL SGYHQI + +D K AF T G YE+ VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGL NAP+TF M FR +F+ V+ DDIL++S+ E H +HL V L+ +L +KKC F E E+LG+ + + + + K A+ ++P
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQ--NKRP----
P+ +K+ + FLG+ YYRRF+ N IA P+ +L + WT + A E+LKAA+ VL + + + L TDAS G+GAVL + NK
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQ--NKRP----
Query: IAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSR
+ YFS+ L K E EL+ I+ A+ +R+ L G HF + TD +L + + E +Q+WL L + F + Y AGP+N VADA+SR
Subjt: IAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.8e-84 | 40.05 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKK-----DGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHY
+L GIIRPS SP++SP+ +V KK + +R VD+K LN T+PD +PIP I+ L L A F+ +DL SG+HQI +++ D+ K AF T G Y
Subjt: MLATGIIRPSVSPFSSPVILVKKK-----DGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHY
Query: EFMVMPFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRA
EF+ +PFGL NAPA FQ +++ + R ++ K V+ DDI+V+S+D ++H ++L +V L + +L N +K HF ++E+LG+ V++ G++AD +K+RA
Subjt: EFMVMPFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRA
Query: MLEWPIPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTK----------KNNFHWTAETTV--AFEQLKAAMVTLLVLALPDFQQPFELETDASGFG
+ E P P ++KEL+ FLG+T YYR+F+ +Y +A PLT LT+ + T + T +F LK+ + + +LA P F +PF L TDAS +
Subjt: MLEWPIPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTK----------KNNFHWTAETTV--AFEQLKAAMVTLLVLALPDFQQPFELETDASGFG
Query: LGAVLSQN----KRPIAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFV-VFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPE
+GAVLSQ+ RPIAY S+ L+KT + + E+E++AI+ +++ R L G + V+TD + L + L R +++W ++ + E+ Y+ G
Subjt: LGAVLSQN----KRPIAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFV-VFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPE
Query: NKVADALSRIPIEAQLN
N VADALSRIP QLN
Subjt: NKVADALSRIPIEAQLN
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 2.3e-78 | 40.97 | Show/hide |
Query: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
+L I PS SP SSPV+LV KKDG +R CVDY+ LN+AT+ D FP+P ID LL + A IF+ +DL SGYHQI + +D K AF T G YE+ VM
Subjt: MLATGIIRPSVSPFSSPVILVKKKDGGWRFCVDYKALNRATVPDKFPIPMIDELLDELHGASIFSKIDLKSGYHQIRVRDEDVKKIAFRTHEGHYEFMVM
Query: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
PFGL NAP+TF M FR +F+ V+ DDIL++S+ E H +HL V L+ +L +KKC F E E+LG+ + + + + K A+ ++P
Subjt: PFGLTNAPATFQALMNQVFRPYLRKFILVFFDDILVYSKDVESHLEHLSIVFTLLREHSLFANRKKCHFGKERIEYLGHWVSSKGVEADKEKIRAMLEWP
Query: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQ--NKRP----
P+ +K+ + FLG+ YYRRF+ N IA P+ +L + WT + A ++LK A+ VL + + + L TDAS G+GAVL + NK
Subjt: IPRNIKELRGFLGLTGYYRRFVANYGTIAAPLTRLTKKNNFHWTAETTVAFEQLKAAMVTLLVLALPDFQQPFELETDASGFGLGAVLSQ--NKRP----
Query: IAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSR
+ YFS+ L K E EL+ I+ A+ +R+ L G HF + TD +L + + E +Q+WL L + F + Y AGP+N VADA+SR
Subjt: IAYFSQKLSKTAKEKSVYERELMAIVLAVEKWRHNLLGHHFVVFTDQKALRYILEQRELIPGIQKWLMKLMGFYFEIFYRAGPENKVADALSR
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