| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032275.1 Integrase, catalytic core [Cucumis melo var. makuwa] | 3.1e-48 | 86.07 | Show/hide |
Query: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
KNAIGLKWVYK+KF+A+ SLE HKA LV KGYAQQHGIDFEETFS IARF+TVRIVL L AQQQW VYQFDVKSAFLNGELQEEVYVEQ EGFVKKDS E
Subjt: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
Query: KVYKFTKALYGLKQAPRACYNK
KVYK TKALYGLKQAPRAC +K
Subjt: KVYKFTKALYGLKQAPRACYNK
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| KAA0033341.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 3.2e-53 | 77.03 | Show/hide |
Query: EHGKWQ--TYRKKKNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYV
++G W+ + KNAIGLKWVYKTKF+A+ SLE HKARLV KGYAQQHGIDFEETFS +ARF+TVRIVL QQQW VYQFDVKS FLNGELQEEVYV
Subjt: EHGKWQ--TYRKKKNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYV
Query: EQLEGFVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
EQ +GFVKKD+ EKVYK TKALYGLKQAPRA Y+KI+ YFQQNGFKRS
Subjt: EQLEGFVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| KAA0056051.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 2.9e-54 | 84.44 | Show/hide |
Query: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
K AIGLKWVYK+KF+A+ SLE HKA LV KGYAQQHGIDFEETFS +ARF+T+RIVL L AQQQW VYQFDVKSAFLNGELQEEVYVEQLEGF KKDS E
Subjt: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
Query: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
KVYK TKALYGLKQAPRA Y+KI+GYFQQNGFKRS
Subjt: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| TYK01935.1 Integrase, catalytic core [Cucumis melo var. makuwa] | 4.3e-50 | 78.47 | Show/hide |
Query: KWQTYRKKK-NAIGLKWVYKTKFSANRSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEG
+WQ K+K AI +K A+ S E K + + +QHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEG
Subjt: KWQTYRKKK-NAIGLKWVYKTKFSANRSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEG
Query: FVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
FVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
Subjt: FVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
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| TYK27736.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 2.0e-55 | 85.19 | Show/hide |
Query: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
KNAIGLKWVYK+KF+A+ SLE HKARLV KGYAQQHGIDFEETFS +ARF+T+RIVL L QQQW VYQFDVKSAFLNGELQEEVYVEQLEGF KKDS E
Subjt: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
Query: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
KVYK TKALYGLKQAPRA Y+KI+GYFQQNGFKRS
Subjt: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SSU5 Integrase, catalytic core | 1.5e-48 | 86.07 | Show/hide |
Query: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
KNAIGLKWVYK+KF+A+ SLE HKA LV KGYAQQHGIDFEETFS IARF+TVRIVL L AQQQW VYQFDVKSAFLNGELQEEVYVEQ EGFVKKDS E
Subjt: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
Query: KVYKFTKALYGLKQAPRACYNK
KVYK TKALYGLKQAPRAC +K
Subjt: KVYKFTKALYGLKQAPRACYNK
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| A0A5A7SV62 Putative gag-pol polyprotein, identical | 1.5e-53 | 77.03 | Show/hide |
Query: EHGKWQ--TYRKKKNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYV
++G W+ + KNAIGLKWVYKTKF+A+ SLE HKARLV KGYAQQHGIDFEETFS +ARF+TVRIVL QQQW VYQFDVKS FLNGELQEEVYV
Subjt: EHGKWQ--TYRKKKNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYV
Query: EQLEGFVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
EQ +GFVKKD+ EKVYK TKALYGLKQAPRA Y+KI+ YFQQNGFKRS
Subjt: EQLEGFVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| A0A5A7URA0 Putative gag-pol polyprotein, identical | 1.4e-54 | 84.44 | Show/hide |
Query: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
K AIGLKWVYK+KF+A+ SLE HKA LV KGYAQQHGIDFEETFS +ARF+T+RIVL L AQQQW VYQFDVKSAFLNGELQEEVYVEQLEGF KKDS E
Subjt: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
Query: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
KVYK TKALYGLKQAPRA Y+KI+GYFQQNGFKRS
Subjt: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| A0A5D3BRX2 Integrase, catalytic core | 2.1e-50 | 78.47 | Show/hide |
Query: KWQTYRKKK-NAIGLKWVYKTKFSANRSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEG
+WQ K+K AI +K A+ S E K + + +QHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEG
Subjt: KWQTYRKKK-NAIGLKWVYKTKFSANRSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEG
Query: FVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
FVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
Subjt: FVKKDSGEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
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| A0A5D3DVG4 Putative gag-pol polyprotein, identical | 9.6e-56 | 85.19 | Show/hide |
Query: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
KNAIGLKWVYK+KF+A+ SLE HKARLV KGYAQQHGIDFEETFS +ARF+T+RIVL L QQQW VYQFDVKSAFLNGELQEEVYVEQLEGF KKDS E
Subjt: KNAIGLKWVYKTKFSANRSLE-HKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGE
Query: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
KVYK TKALYGLKQAPRA Y+KI+GYFQQNGFKRS
Subjt: KVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.3e-20 | 37.68 | Show/hide |
Query: KKKNAIGLKWVYKTKFS-ANRSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDS
+ KN + +WV+ K++ + +KARLV +G+ Q++ ID+EETF+ +AR + R +L L Q V+Q DVK+AFLNG L+EE+Y+ +G +
Subjt: KKKNAIGLKWVYKTKFS-ANRSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDS
Query: GEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
+ V K KA+YGLKQA R + ++ F S+
Subjt: GEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRSN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.1e-24 | 42.34 | Show/hide |
Query: KKKNAIGLKWVYKTKFSAN-RSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDS
K K + KWV+K K + + + +KARLV KG+ Q+ GIDF+E FS + + ++R +L L A V Q DVK+AFL+G+L+EE+Y+EQ EGF
Subjt: KKKNAIGLKWVYKTKFSAN-RSLEHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDS
Query: GEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
V K K+LYGLKQAPR Y K + + + + ++
Subjt: GEKVYKFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 7.2e-08 | 45.16 | Show/hide |
Query: KNAIGLKWVYKTKFSANRSLEH-KARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQ
+N +G KWV+KTK ++ +L+ KARLV KG+ Q+ GI F ET+S + R T+R +L + Q
Subjt: KNAIGLKWVYKTKFSANRSLEH-KARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.8e-26 | 44.7 | Show/hide |
Query: IGLKWVYKTKFSANRSL-EHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGEKVY
+G +W++ K++++ SL +KARLV KGY Q+ G+D+ ETFS + + ++RIVL + + W + Q DV +AFL G L ++VY+ Q GF+ KD V
Subjt: IGLKWVYKTKFSANRSL-EHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGEKVY
Query: KFTKALYGLKQAPRACYNKINGYFQQNGFKRS
K KALYGLKQAPRA Y ++ Y GF S
Subjt: KFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.4e-26 | 45.45 | Show/hide |
Query: IGLKWVYKTKFSANRSL-EHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGEKVY
+G +W++ KF+++ SL +KARLV KGY Q+ G+D+ ETFS + + ++RIVL + + W + Q DV +AFL G L +EVY+ Q GFV KD + V
Subjt: IGLKWVYKTKFSANRSL-EHKARLVEKGYAQQHGIDFEETFSSIARFKTVRIVLELPAQQQWSVYQFDVKSAFLNGELQEEVYVEQLEGFVKKDSGEKVY
Query: KFTKALYGLKQAPRACYNKINGYFQQNGFKRS
+ KA+YGLKQAPRA Y ++ Y GF S
Subjt: KFTKALYGLKQAPRACYNKINGYFQQNGFKRS
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