CuGenDBv2

Gene ID	Cmc09g0241261
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr09:3387295..3389107
RNA-Seq Expression	Cmc09g0241261
Synteny	Cmc09g0241261
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037514.1 reverse transcriptase [Cucumis melo var. makuwa]

7.8e-288

96.1

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Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MAPSEFKELKVQLQELVDK YIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKV IRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
        VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
        FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADAL                +SSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE

Query:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
        LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYW PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
Subjt:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD

Query:  FLFGLPRTSRGYD
        FLFGLPRTSRGYD
Subjt:  FLFGLPRTSRGYD

KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

1.4e-260

84.84

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MA S+ KE KVQLQELVDKGYIRPSVSPWGAPVLFVKKK G LRLCIDY+QLNKVTIRNKYPLP IDDLFDQLRG VVFSKIDLRSGYHQL+VRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFR RYGHYEFLVM FGLTNAPAVFMDLMN+IFHQYL+QFVIVFID ILVYSMDKKAHEEHLRI LQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSA  
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
                  ++    T     GKEYVIYCDASRQGLGCVLM+E KVIAYTSRQLKKHECNY T DLELAAV+LALKIWRHYLFGEKCHIF DHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ
        FDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKSRLPKSALC               VM AESSGSLL+QFQ+ SSLVAEIVGRQPEDSNLQ
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ

Query:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN
        KMLAKAKQGPE EFELR DGAIVKQGRLCVPNISELKG ILEEAHNSAYAMHP S KMYRTLKKTYW PGMKR+I EYVDRC ICQQVK +RQRP GLLN
Subjt:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN

Query:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA
         + VPEWKW+HITMDFLFGLPRTSRGYDGIWVI DRLTKTA
Subjt:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA

KAA0053322.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]

3.9e-255

78.67

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Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MAPSE KELK+QLQELVDKGYIRP+VSPWGAPVLFVKKK GTLRLCIDY+QLNKVTIRNKYPLPRIDDLFDQLRG  +FSKIDLRSGYHQLKVRESDI K
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        T+FRTRYG YEF VM FGLTNAPAVFMDLMNRIFH+YL QFVIVFID ILVYS+D+++HEEHLRI LQTLR+KQLYAKFSKCEFWL QVVFLGHVVSA  
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGE------------TSQCNRG--------------------KEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLE
        VSVDP KVEAVVNW              + +C +                     K+YVIYCDASR GLGCVLMQ+  VIAY SRQLK+HECNYPTHDLE
Subjt:  VSVDPQKVEAVVNWGE------------TSQCNRG--------------------KEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLE

Query:  LAAVILALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMT
        LAAV+LALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC               V+T
Subjt:  LAAVILALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMT

Query:  AESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWS
         E SGSLL+QFQV SSLV EIV RQ EDSNLQK   K+K+G E EFELR DGAIVKQGRLCVPNISELK +ILEEAH+SAYAMHP S KMYRTLKKTYW 
Subjt:  AESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWS

Query:  PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKT
         GMK+EI EYVDRC ICQQVK VRQRP G LNP+ VPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT
Subjt:  PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKT

TYK01989.1 reverse transcriptase [Cucumis melo var. makuwa]

1.0e-287

95.91

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Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MAPSEFKELKVQLQELVDK YIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKV IRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFID+ILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
        VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
        FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADAL                +SSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE

Query:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
        LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYW PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
Subjt:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD

Query:  FLFGLPRTSRGYD
        FLFGLPRTSRGYD
Subjt:  FLFGLPRTSRGYD

TYK17971.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

9.6e-262

85.03

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MA S+ KE KVQLQELVDKGYIRPSVSPWGAPVLFVKKK G LRLCIDY+QLNKVTIRNKYPLP IDDLFDQLRG VVFSKIDLRSGYHQL+VRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFR RYGHYEFLVM FGLTNAPAVFMDLMN+IFHQYL+QFVIVFID ILVYSMDKKAHEEHLRI LQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSA  
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
                  ++    T     GKEYVIYCDASRQGLGCVLM+E KVIAYTSRQLKKHECNYPT DLELAAV+LALKIWRHYLFGEKCHIF DHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ
        FDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKSRLPKSALC               VM AESSGSLL+QFQ+ SSLVAEIVGRQPEDSNLQ
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ

Query:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN
        KMLAKAKQGPE EFELR DGAIVKQGRLCVPNISELKG ILEEAHNSAYAMHP S KMYRTLKKTYW PGMKR+I EYVDRC ICQQVK +RQRP GLLN
Subjt:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN

Query:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA
         + VPEWKW+HITMDFLFGLPRTSRGYDGIWVI DRLTKTA
Subjt:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T223 Reverse transcriptase

3.8e-288

96.1

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MAPSEFKELKVQLQELVDK YIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKV IRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
        VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
        FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADAL                +SSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE

Query:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
        LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYW PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
Subjt:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD

Query:  FLFGLPRTSRGYD
        FLFGLPRTSRGYD
Subjt:  FLFGLPRTSRGYD

A0A5A7TKT0 Reverse transcriptase

6.7e-261

84.84

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MA S+ KE KVQLQELVDKGYIRPSVSPWGAPVLFVKKK G LRLCIDY+QLNKVTIRNKYPLP IDDLFDQLRG VVFSKIDLRSGYHQL+VRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFR RYGHYEFLVM FGLTNAPAVFMDLMN+IFHQYL+QFVIVFID ILVYSMDKKAHEEHLRI LQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSA  
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
                  ++    T     GKEYVIYCDASRQGLGCVLM+E KVIAYTSRQLKKHECNY T DLELAAV+LALKIWRHYLFGEKCHIF DHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ
        FDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKSRLPKSALC               VM AESSGSLL+QFQ+ SSLVAEIVGRQPEDSNLQ
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ

Query:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN
        KMLAKAKQGPE EFELR DGAIVKQGRLCVPNISELKG ILEEAHNSAYAMHP S KMYRTLKKTYW PGMKR+I EYVDRC ICQQVK +RQRP GLLN
Subjt:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN

Query:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA
         + VPEWKW+HITMDFLFGLPRTSRGYDGIWVI DRLTKTA
Subjt:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA

A0A5A7UC49 Reverse transcriptase

1.9e-255

78.67

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MAPSE KELK+QLQELVDKGYIRP+VSPWGAPVLFVKKK GTLRLCIDY+QLNKVTIRNKYPLPRIDDLFDQLRG  +FSKIDLRSGYHQLKVRESDI K
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        T+FRTRYG YEF VM FGLTNAPAVFMDLMNRIFH+YL QFVIVFID ILVYS+D+++HEEHLRI LQTLR+KQLYAKFSKCEFWL QVVFLGHVVSA  
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGE------------TSQCNRG--------------------KEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLE
        VSVDP KVEAVVNW              + +C +                     K+YVIYCDASR GLGCVLMQ+  VIAY SRQLK+HECNYPTHDLE
Subjt:  VSVDPQKVEAVVNWGE------------TSQCNRG--------------------KEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLE

Query:  LAAVILALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMT
        LAAV+LALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC               V+T
Subjt:  LAAVILALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMT

Query:  AESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWS
         E SGSLL+QFQV SSLV EIV RQ EDSNLQK   K+K+G E EFELR DGAIVKQGRLCVPNISELK +ILEEAH+SAYAMHP S KMYRTLKKTYW 
Subjt:  AESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWS

Query:  PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKT
         GMK+EI EYVDRC ICQQVK VRQRP G LNP+ VPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT
Subjt:  PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKT

A0A5D3BV68 Reverse transcriptase

4.9e-288

95.91

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MAPSEFKELKVQLQELVDK YIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKV IRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFID+ILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
        VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
        FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADAL                +SSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFE

Query:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
        LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYW PGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD
Subjt:  LRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMD

Query:  FLFGLPRTSRGYD
        FLFGLPRTSRGYD
Subjt:  FLFGLPRTSRGYD

A0A5D3D150 Reverse transcriptase

4.7e-262

85.03

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        MA S+ KE KVQLQELVDKGYIRPSVSPWGAPVLFVKKK G LRLCIDY+QLNKVTIRNKYPLP IDDLFDQLRG VVFSKIDLRSGYHQL+VRESDIPK
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
        TTFR RYGHYEFLVM FGLTNAPAVFMDLMN+IFHQYL+QFVIVFID ILVYSMDKKAHEEHLRI LQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSA  
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI
                  ++    T     GKEYVIYCDASRQGLGCVLM+E KVIAYTSRQLKKHECNYPT DLELAAV+LALKIWRHYLFGEKCHIF DHKSLKYI
Subjt:  VSVDPQKVEAVVNWGETSQCNRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYI

Query:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ
        FDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKSRLPKSALC               VM AESSGSLL+QFQ+ SSLVAEIVGRQPEDSNLQ
Subjt:  FDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALC---------------VMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQ

Query:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN
        KMLAKAKQGPE EFELR DGAIVKQGRLCVPNISELKG ILEEAHNSAYAMHP S KMYRTLKKTYW PGMKR+I EYVDRC ICQQVK +RQRP GLLN
Subjt:  KMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLN

Query:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA
         + VPEWKW+HITMDFLFGLPRTSRGYDGIWVI DRLTKTA
Subjt:  PMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.1e-73

28.9

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        + P + + +  ++ + +  G IR S +    PV+FV KK GTLR+ +DYK LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
          FR   G +E+LVM +G++ APA F   +N I  +     V+ ++D IL++S  +  H +H++  LQ L++  L    +KCEF  +QV F+G+ +S   
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL
         +   + ++ V+ W +                       TSQ                                            K+ ++  DAS   +
Subjt:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL

Query:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q+        + Y S ++ K + NY   D E+ A+I +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA
        G AN +ADALSR       +PK      + ++S + ++Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   
Subjt:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA

Query:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK
        I+++ H     +HP    +   + + +   G++++I EYV  C  CQ  K+   +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K
Subjt:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK

Query:  TA
         A
Subjt:  TA

P0CT35 Transposon Tf2-2 polyprotein

2.1e-73

28.9

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        + P + + +  ++ + +  G IR S +    PV+FV KK GTLR+ +DYK LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
          FR   G +E+LVM +G++ APA F   +N I  +     V+ ++D IL++S  +  H +H++  LQ L++  L    +KCEF  +QV F+G+ +S   
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL
         +   + ++ V+ W +                       TSQ                                            K+ ++  DAS   +
Subjt:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL

Query:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q+        + Y S ++ K + NY   D E+ A+I +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA
        G AN +ADALSR       +PK      + ++S + ++Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   
Subjt:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA

Query:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK
        I+++ H     +HP    +   + + +   G++++I EYV  C  CQ  K+   +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K
Subjt:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK

Query:  TA
         A
Subjt:  TA

P0CT36 Transposon Tf2-3 polyprotein

2.1e-73

28.9

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        + P + + +  ++ + +  G IR S +    PV+FV KK GTLR+ +DYK LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
          FR   G +E+LVM +G++ APA F   +N I  +     V+ ++D IL++S  +  H +H++  LQ L++  L    +KCEF  +QV F+G+ +S   
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL
         +   + ++ V+ W +                       TSQ                                            K+ ++  DAS   +
Subjt:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL

Query:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q+        + Y S ++ K + NY   D E+ A+I +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA
        G AN +ADALSR       +PK      + ++S + ++Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   
Subjt:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA

Query:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK
        I+++ H     +HP    +   + + +   G++++I EYV  C  CQ  K+   +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K
Subjt:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK

Query:  TA
         A
Subjt:  TA

P0CT37 Transposon Tf2-4 polyprotein

2.1e-73

28.9

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        + P + + +  ++ + +  G IR S +    PV+FV KK GTLR+ +DYK LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
          FR   G +E+LVM +G++ APA F   +N I  +     V+ ++D IL++S  +  H +H++  LQ L++  L    +KCEF  +QV F+G+ +S   
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL
         +   + ++ V+ W +                       TSQ                                            K+ ++  DAS   +
Subjt:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL

Query:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q+        + Y S ++ K + NY   D E+ A+I +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA
        G AN +ADALSR       +PK      + ++S + ++Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   
Subjt:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA

Query:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK
        I+++ H     +HP    +   + + +   G++++I EYV  C  CQ  K+   +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K
Subjt:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK

Query:  TA
         A
Subjt:  TA

P0CT41 Transposon Tf2-12 polyprotein

2.1e-73

28.9

Show/hide

Query:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK
        + P + + +  ++ + +  G IR S +    PV+FV KK GTLR+ +DYK LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPK

Query:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE
          FR   G +E+LVM +G++ APA F   +N I  +     V+ ++D IL++S  +  H +H++  LQ L++  L    +KCEF  +QV F+G+ +S   
Subjt:  TTFRTRYGHYEFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADE

Query:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL
         +   + ++ V+ W +                       TSQ                                            K+ ++  DAS   +
Subjt:  VSVDPQKVEAVVNWGE-----------------------TSQCNR----------------------------------------GKEYVIYCDASRQGL

Query:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q+        + Y S ++ K + NY   D E+ A+I +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQEEK-----VIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA
        G AN +ADALSR       +PK      + ++S + ++Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +PN ++L   
Subjt:  GKANVVADALSR----KSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGA

Query:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK
        I+++ H     +HP    +   + + +   G++++I EYV  C  CQ  K+   +P G L P+   E  WE ++MDF+  LP +S GY+ ++V+VDR +K
Subjt:  ILEEAHNSAYAMHPESIKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTK

Query:  TA
         A
Subjt:  TA

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.9e-06

43.86

Show/hide

Query:  HLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLG--HVVSADEVSVDPQKVEAVVNWGE
        HL + LQ     Q YA   KC F   Q+ +LG  H++S + VS DP K+EA+V W E
Subjt:  HLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLG--HVVSADEVSVDPQKVEAVVNWGE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCCGAGTGAGTTTAAAGAGCTGAAGGTGCAGTTGCAAGAATTAGTTGACAAGGGATACATCAGGCCTAGTGTATCACCTTGGGGAGCTCCAGTGTTATTCGTGAA
GAAGAAATATGGTACCCTAAGATTATGCATTGACTACAAGCAGTTAAACAAGGTCACGATACGTAACAAGTACCCTCTACCACGCATCGATGACTTGTTTGACCAATTAA
GGGGAGTAGTAGTGTTCTCTAAGATTGATCTGAGATCAGGATACCATCAGTTGAAGGTTAGGGAATCAGATATTCCTAAGACAACATTTAGAACGAGGTATGGGCACTAT
GAGTTTTTAGTCATGTCATTCGGTTTAACGAATGCGCCAGCAGTTTTCATGGACCTCATGAATAGGATCTTCCATCAGTATTTATATCAGTTTGTGATAGTGTTCATCGA
CGTCATACTAGTTTACTCAATGGACAAAAAAGCCCATGAGGAACACCTGAGGATTTTTCTTCAAACACTGCGTGATAAACAACTATACGCCAAGTTCAGCAAATGTGAGT
TCTGGTTGAATCAAGTGGTGTTCTTAGGGCATGTGGTTTCAGCGGACGAAGTTAGTGTTGATCCGCAGAAAGTGGAAGCTGTTGTCAATTGGGGAGAGACCAGCCAGTGC
AACAGAGGAAAGGAGTATGTGATCTATTGTGATGCTTCAAGGCAAGGATTAGGTTGTGTGCTCATGCAGGAAGAGAAAGTAATAGCTTATACTTCAAGGCAGTTGAAGAA
GCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTATTCTAGCACTCAAGATTTGGAGACATTATTTATTCGGCGAGAAGTGCCACATTTTCACAGATC
ATAAAAGTCTGAAGTACATCTTTGATCAGAAAGAGCTAAATCTAAGACAGAGGCGATGGCTAGAACTAATCAAAGACTATGATTGTACCATAGAATATCATCCTGGTAAA
GCTAACGTGGTAGCAGATGCATTAAGTAGGAAGTCGAGACTTCCGAAGAGTGCCTTGTGTGTTATGACTGCAGAAAGCTCAGGGAGTCTTTTATCTCAATTTCAGGTTGG
GTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCTTGCAAAGGCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAATGG
ACGGAGCCATAGTTAAGCAGGGAAGACTATGCGTTCCGAATATTAGTGAGCTTAAGGGTGCTATACTAGAAGAAGCTCACAATTCAGCTTACGCTATGCATCCAGAAAGC
ATCAAGATGTATAGAACTCTGAAGAAGACTTATTGGTCGCCTGGTATGAAGCGAGAGATAGTTGAATATGTCGATAGATGTTCGATCTGTCAACAGGTTAAAACAGTGAG
GCAAAGGCCAGAAGGACTCCTTAACCCCATGTCAGTGCCAGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATG
GTATATGGGTAATAGTAGATAGACTCACCAAGACAGCGTAG

mRNA sequence

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Protein sequence

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MAPSEFKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKYGTLRLCIDYKQLNKVTIRNKYPLPRIDDLFDQLRGVVVFSKIDLRSGYHQLKVRESDIPKTTFRTRYGHY
EFLVMSFGLTNAPAVFMDLMNRIFHQYLYQFVIVFIDVILVYSMDKKAHEEHLRIFLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEVSVDPQKVEAVVNWGETSQC
NRGKEYVIYCDASRQGLGCVLMQEEKVIAYTSRQLKKHECNYPTHDLELAAVILALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGK
ANVVADALSRKSRLPKSALCVMTAESSGSLLSQFQVGSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRMDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHPES
IKMYRTLKKTYWSPGMKREIVEYVDRCSICQQVKTVRQRPEGLLNPMSVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTA

Cmc09g0241261 (gene) of Melon (Charmono) v1.1 genome