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Cmc09g0241281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0241281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRNA exonuclease 4
Genome locationCMiso1.1chr09:3443304..3443543
RNA-Seq ExpressionCmc09g0241281
SyntenyCmc09g0241281
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037519.1 RNA exonuclease 4 [Cucumis melo var. makuwa]1.2e-38100Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
        MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ

KAE8648891.1 hypothetical protein Csa_008012 [Cucumis sativus]2.3e-3491.03Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL
        MENGK+ EGYEECVATMRLY++MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYYCWCLD+TL
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL

TYK01994.1 RNA exonuclease 4 [Cucumis melo var. makuwa]1.2e-38100Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
        MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ

XP_008458921.1 PREDICTED: RNA exonuclease 4 [Cucumis melo]1.2e-38100Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
        MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ

XP_011656271.2 RNA exonuclease 4 [Cucumis sativus]2.3e-3491.03Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL
        MENGK+ EGYEECVATMRLY++MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYYCWCLD+TL
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 45.7e-39100Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
        MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ

A0A5A7T8A0 RNA exonuclease 45.7e-39100Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
        MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ

A0A5D3BS62 RNA exonuclease 45.7e-39100Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
        MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ

A0A6J1HBP2 RNA exonuclease 42.5e-2671.79Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL
        ++NG K + YE+CVATMRLY++M+SQVHK EEYPLASDP NK NFAIWKQ ELE+M+P+Q+L++SRSDYYCWCLD+ L
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL

A0A6J1JNC8 RNA exonuclease 44.3e-2671.79Show/hide
Query:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL
        ++NG K + YE+CVATMRLY++M++QVHK EEYPLASDP NK NFAIWKQ ELE+M+P+Q+L+ISRSDYYCWCLD+ L
Subjt:  MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein6.1e-0942.86Show/hide
Query:  KSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD
        K E YE+CV+ MRLY +M+ Q H      + S           KQ +LEKM  ++L Q S S+Y CWCLD
Subjt:  KSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD

AT2G48100.2 Exonuclease family protein6.1e-0942.86Show/hide
Query:  KSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD
        K E YE+CV+ MRLY +M+ Q H      + S           KQ +LEKM  ++L Q S S+Y CWCLD
Subjt:  KSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD

AT2G48100.3 Exonuclease family protein6.1e-0942.86Show/hide
Query:  KSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD
        K E YE+CV+ MRLY +M+ Q H      + S           KQ +LEKM  ++L Q S S+Y CWCLD
Subjt:  KSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLD

AT3G27970.1 Exonuclease family protein5.3e-2161.19Show/hide
Query:  YEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDA
        YE+CVATMRLY +M+ Q HK E YPLA+D  N+ N   W+Q E E+M+P ++L ISRSDYYCWCLD+
Subjt:  YEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDA

AT5G40310.1 Exonuclease family protein5.7e-2365.67Show/hide
Query:  YEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDA
        YE+CVATMRLY +M+ Q H+ E YPLASD  N  NFA W+Q ELE+M+P++LL +SRSDYYCWCLD+
Subjt:  YEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGGGAAGAAATCAGAGGGTTATGAGGAGTGTGTTGCAACAATGAGATTGTACCTGAAAATGAAATCTCAAGTTCACAAGAGAGAGGAATATCCATTGGCTTC
TGATCCACCAAATAAATTTAATTTTGCAATTTGGAAGCAACTTGAGCTTGAGAAGATGACACCACAACAGTTGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGTT
TGGATGCCACCCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGGGAAGAAATCAGAGGGTTATGAGGAGTGTGTTGCAACAATGAGATTGTACCTGAAAATGAAATCTCAAGTTCACAAGAGAGAGGAATATCCATTGGCTTC
TGATCCACCAAATAAATTTAATTTTGCAATTTGGAAGCAACTTGAGCTTGAGAAGATGACACCACAACAGTTGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGTT
TGGATGCCACCCTTCAATAA
Protein sequenceShow/hide protein sequence
MENGKKSEGYEECVATMRLYLKMKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATLQ