; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0241321 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0241321
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRNA exonuclease 4
Genome locationCMiso1.1chr09:3482409..3485840
RNA-Seq ExpressionCmc09g0241321
SyntenyCmc09g0241321
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656270.1 RNA exonuclease 4 [Cucumis sativus]1.6e-17996.19Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQEC+NIFATRGCKFCLAI DSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGST+IDSGRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        SGAIALACKYVGGGSDGS+DICAKVCL+DEGENVIFYSYVKP+  VTNYRYETTGIRPEHIRDAMP+KQVQKKIQEILYNGGEKARILVG CVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKE+YPMASDPQNKNNFAIWRENELQRMSPEQML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

XP_022134351.1 RNA exonuclease 4 isoform X1 [Momordica charantia]5.2e-16286.03Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S ++D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIRPEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        +ISRSDYYCWC+DLR
Subjt:  EISRSDYYCWCMDLR

XP_022938612.1 RNA exonuclease 4-like [Cucurbita moschata]1.2e-16688.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        SG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE TGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

XP_022993635.1 RNA exonuclease 4-like [Cucurbita maxima]7.0e-16788.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        SG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYETTGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

XP_023551468.1 RNA exonuclease 4-like [Cucurbita pepo subsp. pepo]2.8e-16386.98Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQR+HQERCQFS VNSGLLAR A+LGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        SG +ALACKYVGGG DGSLD+CAKVCL+DE EN++FYSYVKPIIPVTNYRYETTGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QD Y +C+  MRLYKRMRSQVHR E +PMASDPQNKNNFA WRENEL+RMSPEQML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 46.9e-15280.25Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGE----------KARILVG
        SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE TG+RPEH+RDAMP+KQVQKKIQE L NG +          KARILVG
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGE----------KARILVG

Query:  HCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWREN
        H +++ L  LQI YPS+MIRDTA YPPLMK+SKL NSL YL Q YLG++++NG + + YEEC+  MRLY +M+SQVH++E YP+ASDP NK NFAIW++ 
Subjt:  HCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWREN

Query:  ELQRMSPEQMLEISRSDYYCWCMD
        EL++M+P+Q+L+ISRSDYYCWC+D
Subjt:  ELQRMSPEQMLEISRSDYYCWCMD

A0A6J1BXL4 RNA exonuclease 42.5e-16286.03Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S ++D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIRPEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        +ISRSDYYCWC+DLR
Subjt:  EISRSDYYCWCMDLR

A0A6J1BZE0 RNA exonuclease 42.5e-16286.03Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S ++D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIRPEH+RDAMP+KQVQKKIQEILYNGGEKAR+LVGH VEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        +ISRSDYYCWC+DLR
Subjt:  EISRSDYYCWCMDLR

A0A6J1FEK0 RNA exonuclease 45.8e-16788.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        SG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE TGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

A0A6J1JZ30 RNA exonuclease 43.4e-16788.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL
        SG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYETTGIRPEH+RDAMP+KQVQKKIQ+ILYNGGEKAR+LVGHCVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRL

Query:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E +PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

SwissProt top hitse value%identityAlignment
O94375 RNA exonuclease 41.2e-2035.58Show/hide
Query:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG
        IA+ C+ VG   D  + + A+V +V+   +V++ +YV+P   VT++R   +G++  H+RDA   ++VQ ++ +IL N     R+LVGH V +DLK L + 
Subjt:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG

Query:  YPSVMIRDTANYPPLMKSSK-LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV
        +P  MIRDT+ +    K +K     LK LA+V LG D+Q+G     ++    M LYK+++ ++
Subjt:  YPSVMIRDTANYPPLMKSSK-LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV

Q6CMT3 RNA exonuclease 43.2e-2135.16Show/hide
Query:  RTRGSGA-IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVED
        RT G G  +++ C++VG G DG     A+V +V+   NV+   +V+P  PVT++R   +GI+P H+ +A+  +  QK++  +L     K RILVGH V  
Subjt:  RTRGSGA-IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVED

Query:  DLKRLQIGYPSVMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMR---SQVHRKESYP
        DL  L + +P  MIRDT+ + P  +  S     SLK L +  L  D+Q+G     E+    M LYK  +    ++H K+  P
Subjt:  DLKRLQIGYPSVMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMR---SQVHRKESYP

Q6PAQ4 RNA exonuclease 44.2e-2136.81Show/hide
Query:  AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQI
        A+AL C+ VG G  G   I A+V +V++    ++  YVKP  PVT+YR   +GIRPE+++     + V+K++ E+L     K RILVGH + +DLK L +
Subjt:  AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQI

Query:  GYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ
         +P   IRDT  + P     K    SLK L++  LG  +Q       ++   AMRLY  ++ +
Subjt:  GYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ

Q91560 RNA exonuclease 46.4e-2239.74Show/hide
Query:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG
        +A+ C+ VG G DG   I A+V +V+     ++  YVKP   VT+YR   +GIRPE ++   P K VQK++ EIL     + R LVGH V +DLK L + 
Subjt:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG

Query:  YPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY
        +P   IRDT  Y P  +  K    SLK L +  L   +Q G     ++   AMRLY
Subjt:  YPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY

Q9GZR2 RNA exonuclease 42.2e-2234.95Show/hide
Query:  LGIRDGSTIIDSGRTRGSG----AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILY
        LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V +V++    ++  YVKP  PVT+YR   +GIRPE+++    ++ VQK++ E+L 
Subjt:  LGIRDGSTIIDSGRTRGSG----AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILY

Query:  NGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ
            K RILVGH + +DLK L + +P   IRDT  Y P     K    SL+ L++  LG  +Q       ++   AMRLY  ++ +
Subjt:  NGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein2.0e-7141.19Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT

Query:  RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVED
        +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  E ++D MP++ V++++   L    N G    +LVGH +  
Subjt:  RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVED

Query:  DLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT2G48100.2 Exonuclease family protein2.0e-7141.19Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT

Query:  RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVED
        +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  E ++D MP++ V++++   L    N G    +LVGH +  
Subjt:  RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVED

Query:  DLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT2G48100.3 Exonuclease family protein2.0e-7141.19Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  C+ IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRT

Query:  RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVED
        +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  E ++D MP++ V++++   L    N G    +LVGH +  
Subjt:  RGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEIL---YNGGEKARILVGHCVED

Query:  DLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT3G27970.1 Exonuclease family protein4.0e-12865.53Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        M+ S+HS HEPTC +CKKHCRS +SLREHLIGPLPKQEC+NIF+ RGC+FC+ IL+S  S+R+HQERCQFS VNSGL  R A LG+RD   +ID   +R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG---------GEKARILVGH
           +AL+CK VGGGSDGSLD+CA+VC+ DE +NVIF++YVKP + VT+YRYETTGIRPE++RDAMP+KQVQ+KIQE L NG         G KARILVGH
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG---------GEKARILVGH

Query:  CVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENEL
         ++ DL RLQ+ YPS MIRDTA YPPLMK+SKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q H+ E+YP+A+D QN++N   WR++E 
Subjt:  CVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENEL

Query:  QRMSPEQMLEISRSDYYCWCMD
        +RMSP++ML ISRSDYYCWC+D
Subjt:  QRMSPEQMLEISRSDYYCWCMD

AT5G40310.1 Exonuclease family protein6.9e-12866.15Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG
        MR S+HS HEPTC IC KHCRS DSLREHLIGPLPKQEC+NIF+ RGC+FCL IL+S  ++R+HQERCQ S V SGL+ R A LG+R+ ST ID   +R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRG

Query:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG---------GEKARILVGH
           +AL+CK VGGGSDGSLD+CA+VC+ DE ENV+F++YVKP IPVTNYRYE TGIRPE++RDAM +K  Q+K+QE L NG           KARILVGH
Subjt:  SGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG---------GEKARILVGH

Query:  CVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENEL
         +++ L  LQ+ Y S MIRDTA YPPLMKSSKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q HR E+YP+ASD QN NNFA WR+NEL
Subjt:  CVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENEL

Query:  QRMSPEQMLEISRSDYYCWCMD
        +RMSPE++L++SRSDYYCWC+D
Subjt:  QRMSPEQMLEISRSDYYCWCMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACA
AGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTTA
ATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTCGCTTGCAAATAT
GTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTAC
AAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGA
AGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAG
TCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATT
ATACAAGAGAATGAGATCACAAGTTCATAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGA
TGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA
mRNA sequenceShow/hide mRNA sequence
TGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTG
TCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACA
GTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATC
GACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTCGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGA
GGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAA
TGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGT
TACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCT
TCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAAAGAGAGCTATCCAATGGCTTCTGACC
CACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGAT
TTGAGGACTTGAGAGCTTCATATATTCTTCTCAACAATGGTGGAATTTAAATTTGGGTTGCCATAGC
Protein sequenceShow/hide protein sequence
MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKY
VGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMK
SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRT