; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0241471 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0241471
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransmembrane protein
Genome locationCMiso1.1chr09:3594337..3599678
RNA-Seq ExpressionCmc09g0241471
SyntenyCmc09g0241471
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51853.2 hypothetical protein Csa_008870 [Cucumis sativus]1.3e-8498.15Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
        MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV RRGECDGATAAETGG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG

Query:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPE+SPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_008458773.1 PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo]4.1e-86100Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
        MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG

Query:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_011655414.1 uncharacterized protein LOC105435525 [Cucumis sativus]1.3e-8498.15Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
        MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV RRGECDGATAAETGG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG

Query:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPE+SPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_023536558.1 uncharacterized protein LOC111797691 [Cucurbita pepo subsp. pepo]2.3e-6581.33Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAA-ETG
        M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWM+GRRCLQ+A   RKKRKL+RR+ ECDGA AA ETG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAA-ETG

Query:  GCVGNEKGLPEISPGSG---EEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
             E+ LPEI PGSG   EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Subjt:  GCVGNEKGLPEISPGSG---EEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

XP_038891069.1 uncharacterized protein LOC120080480 [Benincasa hispida]1.4e-8193.83Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
        MQESPSR TRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALAL+KLPWMVGRRCLQ+ARKKRKKRKL+RRRGECDGATAAETGG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG

Query:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        C  +E+GLPEISPGSGEE+ET GNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

TrEMBL top hitse value%identityAlignment
A0A0A0KR58 Uncharacterized protein6.4e-8598.15Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
        MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV RRGECDGATAAETGG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG

Query:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPE+SPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A1S3C8M3 uncharacterized protein LOC1034980782.0e-86100Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
        MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG

Query:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A5A7T2E5 Uncharacterized protein2.0e-86100Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
        MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGG

Query:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
        CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Subjt:  CVGNEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A6J1HEE2 uncharacterized protein LOC1114632065.6e-6580.24Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAA-ETG
        M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWM+GRRCLQ+A   RKKRKL+RR+ ECDGA AA ET 
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAA-ETG

Query:  GCVGNEKGLPEISPGS----GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
          +  E+GLPEI PGS     EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Subjt:  GCVGNEKGLPEISPGS----GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

A0A6J1JH40 uncharacterized protein LOC1114869589.5e-6578.49Show/hide
Query:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAA-ETG
        M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWM+GRRCLQ+A   RKKRKL+RR+ ECDGA AA ETG
Subjt:  MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAA-ETG

Query:  GCVGNEKGLPEISPGS---------GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
             E+GLPEI PGS          EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Subjt:  GCVGNEKGLPEISPGS---------GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01516.1 unknown protein3.0e-2643.14Show/hide
Query:  CSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECD------GATAAETGGCVGNEKG-----------
        CSGK CRS  A  +ADCVA+CCCPC+VV+   LA VK+PWM+GR+C+ +    +K+ K + R            +    +GGC G   G           
Subjt:  CSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECD------GATAAETGGCVGNEKG-----------

Query:  -------LPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG
                 E    S +E+E T   SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  -------LPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG

AT3G11690.1 unknown protein5.4e-0427.78Show/hide
Query:  SPSRATRRR---RFAVDDGADLIDCSGKHCRSCTAGLVADCVAV-CCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETG
        SPSR+ RR+   + ++   +    C G        G  A C AV CCCPC +V+ L LA+ K+P  + RR ++  R+K+  +  +      DG       
Subjt:  SPSRATRRR---RFAVDDGADLIDCSGKHCRSCTAGLVADCVAV-CCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETG

Query:  GCVGNEKGLPEISPGSGEEDETTGNF
            +E  +  +      +DE   NF
Subjt:  GCVGNEKGLPEISPGSGEEDETTGNF

AT5G14690.1 unknown protein3.2e-2840.43Show/hide
Query:  RRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV---RRRGECDG--------------
        RRRR       D + CS K CRS  A  +ADCVA+CCCPC++++ L L LVK+PWM+GRRCL    + +KKR+++   +RRG  +G              
Subjt:  RRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV---RRRGECDG--------------

Query:  ATAAE---------TGGCVG------------------NEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG
         TA E          GGC G                   E+   E +     ED      SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  ATAAE---------TGGCVG------------------NEKGLPEISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAAAGCCCATCACGAGCCACACGGCGACGAAGATTCGCCGTGGACGACGGCGCTGATCTAATCGACTGCTCCGGCAAGCATTGCCGGTCGTGCACCGCCGGGTT
GGTGGCGGATTGTGTCGCCGTGTGCTGCTGTCCGTGCTCGGTGGTCAGCTTCTTGGCTCTGGCTTTGGTCAAACTGCCGTGGATGGTCGGACGGCGGTGTCTCCAGCAGG
CGAGGAAGAAGAGGAAGAAGAGGAAATTGGTTCGCCGGAGAGGGGAATGCGACGGCGCTACGGCGGCGGAAACCGGTGGGTGTGTGGGAAATGAAAAGGGATTGCCGGAA
ATTTCGCCGGGATCGGGCGAGGAAGATGAAACGACGGGGAATTTTAGTGCAAGATTTGAAGCAGAGAGGATTTGGTTGCAATTGTATCAAGTGGGTCAGTTGGGATTTGG
AAGAGTTTCTTTCACTGGGAATTCAAATCTTTGGCCTAATTCCAATTAA
mRNA sequenceShow/hide mRNA sequence
TAAATAAGAGAAAGGCGGGTTTTTGAAGAGAGAAGAAGAAGCAGTTCCCAATATTCGCTGTCACTCCCCATCGGTACTCATCAAATCTCATTTCCCTTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAAGACAGAATACTGATCAAGAAGCACTAGCTAGCAAGTGATCAAATTAAAAGCACTTCCTCAGATCATATTGCTCA
ACTACGTACAACAATTAATCGATCTATCCACAACCACGTCGTTTTTCCAGGATTTCCCGCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGCCTTCCGATCAAGAAAA
ATGCAAGAAAGCCCATCACGAGCCACACGGCGACGAAGATTCGCCGTGGACGACGGCGCTGATCTAATCGACTGCTCCGGCAAGCATTGCCGGTCGTGCACCGCCGGGTT
GGTGGCGGATTGTGTCGCCGTGTGCTGCTGTCCGTGCTCGGTGGTCAGCTTCTTGGCTCTGGCTTTGGTCAAACTGCCGTGGATGGTCGGACGGCGGTGTCTCCAGCAGG
CGAGGAAGAAGAGGAAGAAGAGGAAATTGGTTCGCCGGAGAGGGGAATGCGACGGCGCTACGGCGGCGGAAACCGGTGGGTGTGTGGGAAATGAAAAGGGATTGCCGGAA
ATTTCGCCGGGATCGGGCGAGGAAGATGAAACGACGGGGAATTTTAGTGCAAGATTTGAAGCAGAGAGGATTTGGTTGCAATTGTATCAAGTGGGTCAGTTGGGATTTGG
AAGAGTTTCTTTCACTGGGAATTCAAATCTTTGGCCTAATTCCAATTAATCTCTCTAAATTTAATTACTCTCATTTGTAAAGTTAGTTAATAAGGTTAAATTATTAATTT
AGCATTCCATTTTCTCAAATATTGTGTTTATTTGGTCTATATATATTCAAACTACACATTTTCAAAATTGGAAAAA
Protein sequenceShow/hide protein sequence
MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGGCVGNEKGLPE
ISPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN