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Cmc09g0241571 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0241571
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr09:3680211..3681170
RNA-Seq ExpressionCmc09g0241571
SyntenyCmc09g0241571
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]1.0e-9095.98Show/hide
Query:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        +KSFRFIAVKSNF FKTLRSNSRSIELRCNEDGCLWFVRASRYKRSE WMIRKYVSD SCSMIVHSSHKQAS EFVSHCMIDYLRYSYSHSTPKDIIHHM
Subjt:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        RMNYGVS+SYYKAWRAKESVMKL KGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]2.6e-9497.7Show/hide
Query:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        +KSFRFIAVKSNF FKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
Subjt:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        RMNYGVS+SYYKAWRAKESVMKL KGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

TYK28211.1 MuDR family transposase [Cucumis melo var. makuwa]7.3e-5761.49Show/hide
Query:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        KSF +IA+K+NF FKT+RSNS+SIE +C++D C W+VRASRYK  ELW +RKY+++H+CS+ ++ ++HKQASS  +S C++     S+  STP DI+ HM
Subjt:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        R   GV++SYYKAWRAKE VM    G+A +SYALIP FF KLKEINPGSFTAYE D  GHFKYCFMAI + IEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

XP_031743969.1 uncharacterized protein LOC116404743 isoform X1 [Cucumis sativus]1.6e-5689.6Show/hide
Query:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGS
        MIRK VSDHSCSMIVHSSHKQASSEF S CMIDYLRYSYSHS PKDIIHHM MNYGVS+SYYK  RAKESV KL KGD D+SYALIPKFFSKLKEINPGS
Subjt:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEG
        FTAYEID NGHFKYCFMAIASSIEG
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEG

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]5.6e-5764.57Show/hide
Query:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHS-TPKDIIHH
        K F +IAVK NF FKTLRSNSRSIE RC +DGC W+VRASRYK S+LWM+RK++  H CSM  V +SH+QAS+  +  C+ +  R S S S TPKDI++ 
Subjt:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHS-TPKDIIHH

Query:  MRMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        +R   GV+ISYYKAWRAKE +MK  KGDA +SYALIPKF  KL+E+NPG+FTAYE D +GHFKYC+MAI SSIEG
Subjt:  MRMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like6.7e-5661.49Show/hide
Query:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        KSF +IA+K+NF FKT+RSNS+SIE +C++D C W+VRASRYK  ELW +RKY+++H+CS+ ++ ++HKQAS+  +S C I     S+  STP DI+ HM
Subjt:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        R   GV++SYYKAWRAKE VM    G+A +SYALIP FF KLKEINPGSFTAYE D  GHFKYCFMAI + IEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

A0A5A7V6N4 SWIM-type domain-containing protein4.9e-9195.98Show/hide
Query:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        +KSFRFIAVKSNF FKTLRSNSRSIELRCNEDGCLWFVRASRYKRSE WMIRKYVSD SCSMIVHSSHKQAS EFVSHCMIDYLRYSYSHSTPKDIIHHM
Subjt:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        RMNYGVS+SYYKAWRAKESVMKL KGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

A0A5D3BD68 SWIM-type domain-containing protein1.2e-9497.7Show/hide
Query:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        +KSFRFIAVKSNF FKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
Subjt:  MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        RMNYGVS+SYYKAWRAKESVMKL KGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

A0A5D3DJR8 MuDR family transposase3.0e-5662.07Show/hide
Query:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        KSF +IA+K+NF FKT+RSNS+SIE +C++D C W+VRASRYK  ELW +RKY+++H+CS+ ++ ++HKQASS  +S C I     S+  STP DI+ HM
Subjt:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        R   GV++SYYKAWRAKE VM    G+A +SYALIP FF KLKEINPGSFTAYE D  GHFKYCFMAI + IEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

A0A5D3DX57 MuDR family transposase3.5e-5761.49Show/hide
Query:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM
        KSF +IA+K+NF FKT+RSNS+SIE +C++D C W+VRASRYK  ELW +RKY+++H+CS+ ++ ++HKQASS  +S C++     S+  STP DI+ HM
Subjt:  KSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHM

Query:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG
        R   GV++SYYKAWRAKE VM    G+A +SYALIP FF KLKEINPGSFTAYE D  GHFKYCFMAI + IEG
Subjt:  RMNYGVSISYYKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCATTTCGCTTTATAGCTGTCAAGAGTAATTTTGTATTCAAGACATTGAGATCTAATTCAAGATCAATTGAGTTGAGATGTAATGAAGATGGTTGTCTTTGGTT
TGTTAGAGCATCGCGTTATAAAAGAAGTGAATTATGGATGATTCGAAAATACGTTAGTGATCATAGTTGCTCAATGATTGTTCATTCTTCTCATAAGCAAGCATCTTCAG
AATTTGTTAGTCATTGTATGATTGATTATTTGAGGTATAGTTATTCTCATTCAACACCAAAAGATATCATCCATCATATGCGTATGAATTATGGAGTTTCTATTAGTTAT
TATAAGGCTTGGAGAGCAAAAGAATCTGTTATGAAGTTGTGGAAAGGAGATGCCGATGATTCTTATGCTTTGATTCCAAAGTTCTTCTCAAAGCTAAAAGAAATAAATCC
AGGTTCATTTACTGCATACGAAATAGATCCAAATGGCCATTTCAAATATTGTTTTATGGCTATTGCATCATCAATTGAAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCATTTCGCTTTATAGCTGTCAAGAGTAATTTTGTATTCAAGACATTGAGATCTAATTCAAGATCAATTGAGTTGAGATGTAATGAAGATGGTTGTCTTTGGTT
TGTTAGAGCATCGCGTTATAAAAGAAGTGAATTATGGATGATTCGAAAATACGTTAGTGATCATAGTTGCTCAATGATTGTTCATTCTTCTCATAAGCAAGCATCTTCAG
AATTTGTTAGTCATTGTATGATTGATTATTTGAGGTATAGTTATTCTCATTCAACACCAAAAGATATCATCCATCATATGCGTATGAATTATGGAGTTTCTATTAGTTAT
TATAAGGCTTGGAGAGCAAAAGAATCTGTTATGAAGTTGTGGAAAGGAGATGCCGATGATTCTTATGCTTTGATTCCAAAGTTCTTCTCAAAGCTAAAAGAAATAAATCC
AGGTTCATTTACTGCATACGAAATAGATCCAAATGGCCATTTCAAATATTGTTTTATGGCTATTGCATCATCAATTGAAGGTTGA
Protein sequenceShow/hide protein sequence
MKSFRFIAVKSNFVFKTLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVSISY
YKAWRAKESVMKLWKGDADDSYALIPKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEG