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Cmc09g0241581 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0241581
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNADH dehydrogenase subunit 3
Genome locationCMiso1.1chr09:3703432..3703767
RNA-Seq ExpressionCmc09g0241581
SyntenyCmc09g0241581
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4075863.1 unnamed protein product [Lactuca saligna]7.2e-2675Show/hide
Query:  FRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        FRYA PR+R ++TKWAVVMSEFAPI IYLVI+ LVSLIPL + FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

GEV07194.1 NADH dehydrogenase subunit 3, mitochondrial [Tanacetum cinerariifolium]3.8e-2776.19Show/hide
Query:  FRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        FRYA PR+R ++TKWAVVMSEFAPICIYLVI+ LVSLIPL + FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

KAA0065512.1 ribosomal protein S12C [Cucumis melo var. makuwa]3.8e-2776.74Show/hide
Query:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        F FRYA PRSR +R+KWAVVMSEFAPICIYLVI+ LVSLIPL L FPFASNS TY + LS Y CGFDP GD +SR +IRFYLVSIL
Subjt:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

KAF1863087.1 hypothetical protein Lal_00041074 [Lupinus albus]1.9e-2673.86Show/hide
Query:  FFFSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        F   F YA PR+R +RTKW VVMSEFAPICIYLVI+ LVSLIPL L FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FFFSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

RYQ97533.1 hypothetical protein Ahy_B08g093601 [Arachis hypogaea]2.5e-2675.58Show/hide
Query:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        F FRYA PR+R +RTKWAVVMSEFAPICI LVI+ LVSLIPL + FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

TrEMBL top hitse value%identityAlignment
A0A072TTI0 NADH dehydrogenase subunit 36.0e-2673.86Show/hide
Query:  FFFSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        FF  FRYA PR   +RTKW VVMSEFAPICIYLVI+ LVSLI L L FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FFFSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

A0A444Y6J8 NADH dehydrogenase subunit 31.2e-2675.58Show/hide
Query:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        F FRYA PR+R +RTKWAVVMSEFAPICI LVI+ LVSLIPL + FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

A0A5A7VB34 NADH dehydrogenase subunit 31.9e-2776.74Show/hide
Query:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        F FRYA PRSR +R+KWAVVMSEFAPICIYLVI+ LVSLIPL L FPFASNS TY + LS Y CGFDP GD +SR +IRFYLVSIL
Subjt:  FSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

A0A6A5LPN8 NADH dehydrogenase subunit 39.2e-2773.86Show/hide
Query:  FFFSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        F   F YA PR+R +RTKW VVMSEFAPICIYLVI+ LVSLIPL L FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FFFSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

A0A6S7L7V2 NADH dehydrogenase subunit 33.5e-2675Show/hide
Query:  FRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        FRYA PR+R ++TKWAVVMSEFAPI IYLVI+ LVSLIPL + FPFASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL
Subjt:  FRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

SwissProt top hitse value%identityAlignment
O99869 NADH-ubiquinone oxidoreductase chain 31.5e-1872.73Show/hide
Query:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        MSEFAPICIYLVI+ LVSLIPL L F F+SNS TY +  S Y CG DP GD +SRV+IRFYLVSIL
Subjt:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

P16265 NADH-ubiquinone oxidoreductase chain 33.4e-1864.94Show/hide
Query:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL-VAFSYQGLYF
        M EFAPICIYLVI+ LVSLI L + F FASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL + F  +  +F
Subjt:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL-VAFSYQGLYF

P27062 NADH-ubiquinone oxidoreductase chain 33.6e-2075.76Show/hide
Query:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        MSEFAPICIYLVI+ LVSLIPL + FPFASNS TY   LS Y CGFDP GD +SR +IRFYLVSIL
Subjt:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

P60159 NADH-ubiquinone oxidoreductase chain 33.4e-1864.94Show/hide
Query:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL-VAFSYQGLYF
        M EFAPICIYLVI+ LVSLI L + F FASNS TY + LS Y CGFDPFGD +SR +IRFYLVSIL + F  +  +F
Subjt:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL-VAFSYQGLYF

Q36664 NADH-ubiquinone oxidoreductase chain 35.2e-1964.94Show/hide
Query:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL-VAFSYQGLYF
        MSEFAPICIYLVI+ LV LIPL + F FASN  TY + LS Y CGFDPFGD +SR +IRFYLVSIL + F  +  +F
Subjt:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL-VAFSYQGLYF

Arabidopsis top hitse value%identityAlignment
AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein3.1e-1972.73Show/hide
Query:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        MSEFAPI IYLVI+ LVSLI L + FPFASNS TY + LS Y CGFDP GD +SR +IRFYLVSIL
Subjt:  MSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL

ATMG00990.1 NADH dehydrogenase 33.1e-1971.64Show/hide
Query:  VMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL
        +MSEFAPI IYLVI+ LVSLI L + FPFASNS TY + LS Y CGFDP GD +SR +IRFYLVSIL
Subjt:  VMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTTTTCTTCTTTTCTTTTCGGTATGCCACTCCGCGATCAAGGAGAAAAAGAACCAAGTGGGCTGTGGTGATGTCAGAATTTGCACCGATTTGTATCTAT
TTAGTGATCACTTCGCTAGTTTCTTTAATCCCACTCGATCTTTCTTTTCCATTTGCTTCCAATAGTGAAACCTATCTAAAAATATTGTCGGGCTATGGATGTGGT
TTTGATCCTTTCGGTGATGTCAAAAGTCGTGTCAATATTCGATTTTATCTTGTTTCCATTTTAGTAGCGTTTAGCTACCAAGGGCTATATTTTTCATTGATCCAA
CTATTTTGGTTACCGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTTTTCTTCTTTTCTTTTCGGTATGCCACTCCGCGATCAAGGAGAAAAAGAACCAAGTGGGCTGTGGTGATGTCAGAATTTGCACCGATTTGTATCTAT
TTAGTGATCACTTCGCTAGTTTCTTTAATCCCACTCGATCTTTCTTTTCCATTTGCTTCCAATAGTGAAACCTATCTAAAAATATTGTCGGGCTATGGATGTGGT
TTTGATCCTTTCGGTGATGTCAAAAGTCGTGTCAATATTCGATTTTATCTTGTTTCCATTTTAGTAGCGTTTAGCTACCAAGGGCTATATTTTTCATTGATCCAA
CTATTTTGGTTACCGAGTTAG
Protein sequenceShow/hide protein sequence
MVFFFFSFRYATPRSRRKRTKWAVVMSEFAPICIYLVITSLVSLIPLDLSFPFASNSETYLKILSGYGCGFDPFGDVKSRVNIRFYLVSILVAFSYQGLYFSLIQ
LFWLPS