CuGenDBv2

Gene ID	Cmc09g0241601
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	CMiso1.1chr09:3735163..3735552
RNA-Seq Expression	Cmc09g0241601
Synteny	Cmc09g0241601
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAB1669706.1 hypothetical protein ES319_1Z017500v1, partial [Gossypium barbadense]

4.0e-44

72.46

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        ++H HLAI F FL+AGHMY+T+FGIGHSIKD L+AHIP GGRLGRGHKGLYDTI NS+HFQLGL LASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQYIM-----IGAFAHELYFLLEI---NRMRIMYWQ
        TH+QYI         F  ELYFLLEI   NRMRIMYWQ
Subjt:  THYQYIM-----IGAFAHELYFLLEI---NRMRIMYWQ

KAG4154837.1 hypothetical protein ERO13_D03G073920v2, partial [Gossypium hirsutum]

9.6e-46

74.45

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        ++HHHLA    FL+AGHMY+T+FGIGHSIKD L+AHIP GGRLGRGHKGLYDTI NS+HFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAHELYFLLEI---NRMRIMYWQ
        TH+QY    IM GAFAH   FLLEI   NRMRIMYWQ
Subjt:  THYQY----IMIGAFAHELYFLLEI---NRMRIMYWQ

QHN77001.1 Photosystem I P700 chlorophyll a apoprotein [Arachis hypogaea]

5.6e-46

74.45

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        ++HHHLAI  LFL+AGHMY+T+FGIGHSIK+ L+AHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAHELYFLLEI---NRMRIMYWQ
        TH+QY    IM GAFAH   FLLEI   N+ RIMYWQ
Subjt:  THYQY----IMIGAFAHELYFLLEI---NRMRIMYWQ

YP_009968114.1 photosystem I P700 apoprotein A2 [Actinidia setosa]

1.6e-45

72.66

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI F+FLVAGHMY+T+FGIGHS+KD LDAHIP GGRLG GHKGLYDTI NS+HFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAHELYFLL-----EINRMRIMYWQ
        TH+QY    IM GAFAH   F +     + NRMRIMYWQ
Subjt:  THYQY----IMIGAFAHELYFLL-----EINRMRIMYWQ

YP_009994451.1 photosystem I P700 apoprotein A2 [Cuscuta approximata]

1.5e-43

76.38

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAITFLFLVAGHMY+T+FGIGHSIKD LDAHIP GGRLGRGH+GLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQYI----MIGAFAH-ELYFLLEIN
        TH+QYI    M GAFAH  ++F+ + N
Subjt:  THYQYI----MIGAFAH-ELYFLLEIN

TrEMBL top hits

e value

%identity

Alignment

A0A5J5N9K0 Photosystem I (Fragment)

1.9e-44

72.46

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        ++H HLAI F FL+AGHMY+T+FGIGHSIKD L+AHIP GGRLGRGHKGLYDTI NS+HFQLGL LASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQYIM-----IGAFAHELYFLLEI---NRMRIMYWQ
        TH+QYI         F  ELYFLLEI   NRMRIMYWQ
Subjt:  THYQYIM-----IGAFAHELYFLLEI---NRMRIMYWQ

A0A6B9V8J6 Photosystem I P700 chlorophyll a apoprotein

2.7e-46

74.45

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        ++HHHLAI  LFL+AGHMY+T+FGIGHSIK+ L+AHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAHELYFLLEI---NRMRIMYWQ
        TH+QY    IM GAFAH   FLLEI   N+ RIMYWQ
Subjt:  THYQY----IMIGAFAHELYFLLEI---NRMRIMYWQ

A0A6M3WBK9 Photosystem I P700 chlorophyll a apoprotein A2

9.6e-44

76.38

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI FLFLVAGHMY+T+FGIGHSIKD LDAHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAH-ELYFLLEIN
        TH+QY    IM GAFAH  ++F+ + N
Subjt:  THYQY----IMIGAFAH-ELYFLLEIN

A0A7G5VU46 Photosystem I P700 apoprotein A2

7.9e-46

72.66

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI F+FLVAGHMY+T+FGIGHS+KD LDAHIP GGRLG GHKGLYDTI NS+HFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAHELYFLL-----EINRMRIMYWQ
        TH+QY    IM GAFAH   F +     + NRMRIMYWQ
Subjt:  THYQY----IMIGAFAHELYFLL-----EINRMRIMYWQ

A0A7H0DGT1 Photosystem I P700 chlorophyll a apoprotein A2

7.4e-44

76.38

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAITFLFLVAGHMY+T+FGIGHSIKD LDAHIP GGRLGRGH+GLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQYI----MIGAFAH-ELYFLLEIN
        TH+QYI    M GAFAH  ++F+ + N
Subjt:  THYQYI----MIGAFAH-ELYFLLEIN

SwissProt top hits

e value

%identity

Alignment

A4GYQ9 Photosystem I P700 chlorophyll a apoprotein A2

9.9e-46

74.8

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI FLFL+AGHMY+T+FGIGHSIKD L+AHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAH-ELYFLLEIN
        TH+QY    IM GAFAH  ++F+ + N
Subjt:  THYQY----IMIGAFAH-ELYFLLEIN

Q14FF8 Photosystem I P700 chlorophyll a apoprotein A2

9.9e-46

74.8

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI FLFL+AGHMY+T+FGIGHSIKD L+AHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAH-ELYFLLEIN
        TH+QY    IM GAFAH  ++F+ + N
Subjt:  THYQY----IMIGAFAH-ELYFLLEIN

Q27S51 Photosystem I P700 chlorophyll a apoprotein A2

9.9e-46

74.8

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI F+FLVAGHMY+T+FGIGHS+KD LDAHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAH-ELYFLLEIN
        TH+QY    IM GAFAH  ++F+ + N
Subjt:  THYQY----IMIGAFAH-ELYFLLEIN

Q332X9 Photosystem I P700 chlorophyll a apoprotein A2

7.6e-46

74.8

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI FLFL+AGHMY+T+FGIGHS+KD LDAHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAH-ELYFLLEIN
        TH+QY    IM GAFAH  ++F+ + N
Subjt:  THYQY----IMIGAFAH-ELYFLLEIN

Q33332 Photosystem I P700 chlorophyll a apoprotein A2

4.5e-46

75.59

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI F+FLVAGHMY+T+FGIGHSIKD LDAHIP GGRLGRGHKGLYDTI NSLHFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAH-ELYFLLEIN
        TH+QY    IM GAFAH  ++F+ + N
Subjt:  THYQY----IMIGAFAH-ELYFLLEIN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

6.0e-46

73.23

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY
        M+HHHLAI  LFL+AGHMY+T+FGIGHSIKD L+AHIP GGRLGRGHKGLYDTI NS+HFQLGLALASL VITSLVA++MY+LP+YAFI QD  TQA LY
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDL-TQATLY

Query:  THYQY----IMIGAFAH-ELYFLLEIN
        TH+QY    IM GAFAH  ++F+ + N
Subjt:  THYQY----IMIGAFAH-ELYFLLEIN

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.5e-25

48.78

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Query:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQD-LTQATLY
        ++HHHLAI  LFL+AGHMY+T++GIGH IKD L+AH   G   G+GHKGLY+ +  S H QL L LA L  +T +VA +MY++P Y ++  D  TQ +L+
Subjt:  MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQD-LTQATLY

Query:  THYQYI----MIGAFAHELYFLL
        TH+ +I    ++GA AH   F++
Subjt:  THYQYI----MIGAFAHELYFLL

Sequences

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CDS sequence

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ATGTCTCATCATCACTTAGCTATTACATTTCTTTTTCTTGTTGCTGGTCATATGTATAAAACTCATTTCGGGATTGGACATAGTATAAAAGATTACTTAGATGCACATAT
TCCATCTGGGGGACGATTGGGGCGTGGACATAAAGGTCTTTATGACACAATAAAGAATTCGCTTCATTTTCAATTAGGTCTTGCTTTAGCCTCTTTATGGGTTATTACTT
CTTTGGTAGCTAAAAATATGTACACTTTACCTTCTTATGCGTTCATAACACAAGACTTGACTCAAGCTACATTATATACCCATTACCAATACATTATGATAGGAGCTTTT
GCTCATGAGCTATATTTTTTATTAGAGATTAACAGAATGAGGATAATGTATTGGCAATAA

mRNA sequence

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Protein sequence

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MSHHHLAITFLFLVAGHMYKTHFGIGHSIKDYLDAHIPSGGRLGRGHKGLYDTIKNSLHFQLGLALASLWVITSLVAKNMYTLPSYAFITQDLTQATLYTHYQYIMIGAF
AHELYFLLEINRMRIMYWQ

Cmc09g0241601 (gene) of Melon (Charmono) v1.1 genome