CuGenDBv2

Gene ID	Cmc09g0241611
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	CMiso1.1chr09:3735564..3736162
RNA-Seq Expression	Cmc09g0241611
Synteny	Cmc09g0241611
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF9825350.1 hypothetical protein H0E87_005072 [Populus deltoides]

2.9e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

YP_004841782.1 photosystem I P700 apoprotein A2 [Cucumis melo subsp. melo]

2.9e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

YP_009431641.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus rehmii]

2.9e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

YP_009752074.1 photosystem I P700 apoprotein A2 [Dendrosicyos socotranus]

2.9e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

YP_009753088.1 photosystem I P700 apoprotein A2 [Corallocarpus boehmii]

2.9e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU08 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

A0A1X9Q1T8 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

A0A218KG43 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

A0A249RZ56 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

G3ETY4 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-64

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

SwissProt top hits

e value

%identity

Alignment

A1EA07 Photosystem I P700 chlorophyll a apoprotein A2

1.0e-64

72.29

Show/hide

Query:  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPA
        GP+NIAYS               YTIGLRTN +LYTGA+ LLFL  +SL+ GWLHLQPKWK SLSWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPA
Subjt:  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPA

Query:  SREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        SR E VRW NFLDVLPYPQGL PLLTGQWNLYAQN +S+NHLFGT + AGTAILTLL GFHPQ QS
Subjt:  SREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

P58386 Photosystem I P700 chlorophyll a apoprotein A2

7.9e-65

72.89

Show/hide

Query:  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPA
        GP+NIAYS               YTIGLRTN +LYTGA+ LLFL  +SLI GWLHLQPKWK SLSWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPA
Subjt:  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPA

Query:  SREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        SR E VRW NFLDVLPYPQGL PLLTGQWNLYAQN +S+NHLFGT + AGTAILTLL GFHPQ QS
Subjt:  SREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A2

3.8e-67

74.85

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

Q6ENH5 Photosystem I P700 chlorophyll a apoprotein A2

1.0e-64

72.89

Show/hide

Query:  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPA
        GP+NIAYS               YTIGLRTN +LYTGA+ LLFL  +SLI GWLHLQPKWK SLSWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPA
Subjt:  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPA

Query:  SREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        SR E VRW NFLDVLPYPQGL PLLTGQWNLYAQN +S+NHLFGT + AGTAILTLL GFHPQ QS
Subjt:  SREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

Q8S8X5 Photosystem I P700 chlorophyll a apoprotein A2

4.6e-65

73.05

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTN +LYTGA+ LLFL AISLI GWLHLQPKWK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR ESVRW NFLDVLP+PQGL PL TGQWNLYAQN +S++HLFGT E AGTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

2.6e-63

69.46

Show/hide

Query:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP
        LGP+NIAYS               YTIGLRTN +LYTGA+ LLFL A+SLI GWLHLQPKWK  +SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IP
Subjt:  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIP

Query:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS
        ASR E VRW NFL+VLP+PQGL PL TGQWNLYAQN +S++HLFGT + +GTAILTLL GFHPQ QS
Subjt:  ASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.4e-13

32.54

Show/hide

Query:  GLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASR--------------EESVRWKNFL
        G+ +  +LY  A+  L   A+ L  GW H   K    L+WFQ+VES LNHH + L G+ SL+W GH VH+ +P ++               E +  ++ L
Subjt:  GLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASR--------------EESVRWKNFL

Query:  DVL--PYPQGLEPLLTGQWNLYAQNL
          L   + +G  P  T  W+ Y++ L
Subjt:  DVL--PYPQGLEPLLTGQWNLYAQNL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTATAGGACCCTTTACATGTCAGACCTATTGCTCATGCCTTGGCCCAATGAATATCGCTTATTCTAAGCATGGGTATATGGTCAATCAGCCTTCGAAGCTTTTACT
CGAGTATACAATTGGTTTACGCACTAACGGGGAACTTTATACTGGAGCTGTTTCTCTATTATTTCTTTTTGCGATATCTTTAATACCTGGTTGGTTACATCTACAACCCA
AATGGAAACTGAGCCTTTCCTGGTTTCAAAATGTCGAATCTCGTCTCAATCATCATTTTTCAAAACTATTTGGAATCAATTCCTTGGCTTGGACAGGACATTTAGTCCAT
ATTTTTATTCCTGCATCCAGGGAAGAATCTGTTCGGTGGAAGAATTTCTTAGATGTATTGCCATATCCCCAAGGATTAGAACCACTTTTGACAGGTCAATGGAATCTTTA
TGCTCAAAATCTCAATTCAAATAATCATTTATTTGGTACTTTCGAAAGAGCAGGAACTGCCATTCTAACCCTTCTCGAGGGATTCCATCCGCAAGTGCAAAGTTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGIGPFTCQTYCSCLGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVH
IFIPASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

Cmc09g0241611 (gene) of Melon (Charmono) v1.1 genome