| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0034962.1 gag/pol protein [Cucumis melo var. makuwa] | 9.2e-93 | 90.58 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+M NSKKGLL YRY IHLSKEQCPKTPQEVEDMS I YA +VGSLMYAMLCTRP+ICYLVGIVSRYQSNP RDHWT VKNILKYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKD ILTGYTDS+FQTD+DARKSTSGSVFTLNGGAVVW +IKQSCIV+S MEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| KAA0046768.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-93 | 90.05 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+MQNSKKGLLPYRY I LSKEQCPKTPQEVEDMS IPYA ++GSLMYAMLCTRP+ICY VGIVSRYQSNP RDHWTAVKNILKY R
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKDLILTGYTDSDFQTD+DARKST GSVFTLNG AVVWR+IKQSCI DS MEA YVAACEA+KEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| KAA0050132.1 gag/pol protein [Cucumis melo var. makuwa] | 7.0e-93 | 89.01 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSY+DKMLSRY+MQN KK LL YRY IHLSKEQCPKTPQEVEDMS I YA++VGSLMYAMLCTRP+ICY VGIVSRYQSNPGRDHWTA+KNILKYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKDLIL GYTDSDFQTD+DARKSTSGSVFTLNGGAVVWR+IKQSCI DS ME EYVAACEAAK+AVWLKKFLTDLE VPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-92 | 88.48 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+MQNSKK LLPYRY IHLSKEQCPKTPQEVEDMS IPYAF++GSLMYAMLC RP+ICY V IVS YQSNPGRDHWT VKNI+KYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYM VYGSKDLILT YTDSDFQTD+DARKSTSGSVF LNGGAVVWR+IKQSCI DS ME +YVAACEAAKEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-92 | 89.53 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+M NSKKGLLPYRY IHLSKEQCPKTPQEVEDMS IPYA +VGSLMY MLCTRPNICY VGIVSR QS PGRDHWT VKNILKYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKDLILTGYTD FQTD+DARKSTSG VFT+NGGAVVWR+IKQSCI DS MEAEYVA CEAAKEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TV73 Gag/pol protein | 2.6e-93 | 90.05 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+MQNSKKGLLPYRY I LSKEQCPKTPQEVEDMS IPYA ++GSLMYAMLCTRP+ICY VGIVSRYQSNP RDHWTAVKNILKY R
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKDLILTGYTDSDFQTD+DARKST GSVFTLNG AVVWR+IKQSCI DS MEA YVAACEA+KEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| A0A5A7U2R8 Gag/pol protein | 3.4e-93 | 89.01 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSY+DKMLSRY+MQN KK LL YRY IHLSKEQCPKTPQEVEDMS I YA++VGSLMYAMLCTRP+ICY VGIVSRYQSNPGRDHWTA+KNILKYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKDLIL GYTDSDFQTD+DARKSTSGSVFTLNGGAVVWR+IKQSCI DS ME EYVAACEAAK+AVWLKKFLTDLE VPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| A0A5D3BX45 Gag/pol protein | 5.8e-93 | 89.53 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+M NSKKGLLPYRY IHLSKEQCPKTPQEVEDMS IPYA +VGSLMY MLCTRPNICY VGIVSR QS PGRDHWT VKNILKYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKDLILTGYTD FQTD+DARKSTSG VFT+NGGAVVWR+IKQSCI DS MEAEYVA CEAAKEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| A0A5D3DCF0 Gag/pol protein | 4.4e-93 | 90.58 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+M NSKKGLL YRY IHLSKEQCPKTPQEVEDMS I YA +VGSLMYAMLCTRP+ICYLVGIVSRYQSNP RDHWT VKNILKYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYMLVYGSKD ILTGYTDS+FQTD+DARKSTSGSVFTLNGGAVVW +IKQSCIV+S MEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| A0A5D3DJL5 Gag/pol protein | 1.7e-92 | 88.48 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
MSQTSYIDKMLSRY+MQNSKK LLPYRY IHLSKEQCPKTPQEVEDMS IPYAF++GSLMYAMLC RP+ICY V IVS YQSNPGRDHWT VKNI+KYLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
RTKDYM VYGSKDLILT YTDSDFQTD+DARKSTSGSVF LNGGAVVWR+IKQSCI DS ME +YVAACEAAKEAVWLKKFLTDLEVVPNM
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEVVPNM
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.5e-25 | 35.2 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLP----YRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNIL
+SQ++Y+ K+LS++ M+N P YE+ S E C P +G LMY MLCTRP++ V I+SRY S + W +K +L
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLP----YRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNIL
Query: KYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDRDARKSTSGSVFTL-NGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEV
+YL+ T D L++ K+L + GY DSD+ RKST+G +F + + + W +Q+ + S+ EAEY+A EA +EA+WLK LT + +
Subjt: KYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDRDARKSTSGSVFTL-NGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEV
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| P0CV72 Secreted RxLR effector protein 161 | 5.3e-27 | 44.36 | Show/hide |
Query: MSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDRDARKSTSGSVFTLNGGA
M +PY +VG++MY M+ TRP++ VG++S++ S+P HW A+K +L+YL+ T+ Y L + L GY+D+D+ D ++R+STSG +F LNGG
Subjt: MSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDRDARKSTSGSVFTLNGGA
Query: VVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWL
V WR+ KQ + S+ E EY+A EA +EAVWL
Subjt: VVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-49 | 50.27 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
+SQ YI+++L R+ M+N+K P + LSK+ CP T +E +M+K+PY+ +VGSLMYAM+CTRP+I + VG+VSR+ NPG++HW AVK IL+YLR
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDL
T L +G D IL GYTD+D D D RKS++G +FT +GGA+ W++ Q C+ S EAEY+AA E KE +WLK+FL +L
Subjt: RTKDYMLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-15 | 31.91 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
+SQ YI +L+R M +K P LS K E Y VGSL Y + TRP+I Y V +S++ P +H A+K IL+YL
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDY-MLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEV
T ++ + + L L Y+D+D+ D+D ST+G + L + W + KQ +V S+ EAEY + + E W+ LT+L +
Subjt: RTKDY-MLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.7e-18 | 32.45 | Show/hide |
Query: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
+SQ Y +L+R M +K P L+ K P E Y VGSL Y + TRP++ Y V +S+Y P DHW A+K +L+YL
Subjt: MSQTSYIDKMLSRYRMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSKIPYAFSVGSLMYAMLCTRPNICYLVGIVSRYQSNPGRDHWTAVKNILKYLR
Query: RTKDY-MLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEV
T D+ + + L L Y+D+D+ D D ST+G + L + W + KQ +V S+ EAEY + + E W+ LT+L +
Subjt: RTKDY-MLVYGSKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRNIKQSCIVDSNMEAEYVAACEAAKEAVWLKKFLTDLEV
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