CuGenDBv2

Gene ID	Cmc09g0241701
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	DExH-box ATP-dependent RNA helicase DExH17
Genome location	CMiso1.1chr09:3866748..3869139
RNA-Seq Expression	Cmc09g0241701
Synteny	Cmc09g0241701
Gene Ontology terms	GO:0005681 - spliceosomal complex (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003724 - RNA helicase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008458786.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH17 isoform X1 [Cucumis melo]

2.1e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

XP_008458788.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH17 isoform X3 [Cucumis melo]

2.1e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

XP_008458789.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH17 isoform X5 [Cucumis melo]

2.1e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

XP_016902336.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH17 isoform X2 [Cucumis melo]

2.1e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

XP_016902337.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH17 isoform X4 [Cucumis melo]

2.1e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C873 DExH-box ATP-dependent RNA helicase DExH17 isoform X5

1.0e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

A0A1S3C985 DExH-box ATP-dependent RNA helicase DExH17 isoform X1

1.0e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

A0A1S3C9X5 DExH-box ATP-dependent RNA helicase DExH17 isoform X3

1.0e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

A0A1S4E281 DExH-box ATP-dependent RNA helicase DExH17 isoform X2

1.0e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

A0A1S4E284 DExH-box ATP-dependent RNA helicase DExH17 isoform X4

1.0e-199

99.72

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
        +PYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLL

Query:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
        DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY
Subjt:  DEDLEEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEY

Query:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
        VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA
Subjt:  VTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARA

Query:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
        GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
Subjt:  GPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

SwissProt top hits

e value

%identity

Alignment

B6DMK2 ATP-dependent DNA helicase MER3 homolog

3.6e-13

30.65

Show/hide

Query:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWG--------RMPPSS-------------------HP-PEEVYVIDDD-GE
        +PYS  + +  P   + T+K D+IF+EY+G+D+H+K  +  ++ +V   +G         +P  S                   +P  +EV VI+DD   
Subjt:  NPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWG--------RMPPSS-------------------HP-PEEVYVIDDD-GE

Query:  PLPQAATNELPISG--DLNPLLD-SMPSFNLL-DEDLEEADPATGND--EDECKIITERTVFDHIREKAKNFP--MLAASKNNAHSPAAVTYSLTKNKQ
          P    N+L I G  + N L     PSF LL +ED E+      ++  E ECK  T  T+FDHIR+K+++FP  ML+ S ++++ P  +    T   Q
Subjt:  PLPQAATNELPISG--DLNPLLD-SMPSFNLL-DEDLEEADPATGND--EDECKIITERTVFDHIREKAKNFP--MLAASKNNAHSPAAVTYSLTKNKQ

Q5D892 DExH-box ATP-dependent RNA helicase DExH17

1.2e-29

33.52

Show/hide

Query:  NPYSTVVLLSHP-QQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLN-VRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFN
        +PYS  VLL  P QQ K+T+KADLIF+EYIGIDLH  L L + N N V  K     P  +PP     I DD  P+    +N            D MPSF 
Subjt:  NPYSTVVLLSHP-QQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLN-VRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFN

Query:  LLDEDL-EEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQN
        L+D+D  EE +P    +ED+C II E TVFDHIREKAK FP L  +  N  S  A   S+ K K        +L E +  EL P  + DS     D   N
Subjt:  LLDEDL-EEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQN

Query:  NEYVTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVI-HKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENK
         + + Q +   + P +       S  ++  ++   ++ETIF++I+++S + P +     EN  T              EG + E      + + +    K
Subjt:  NEYVTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVI-HKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENK

Query:  RARAGPESSSDMNSSKWKKQQQS-PSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
          R   ++ S++ S      ++S  S+   K +CS   A +++  D F+ FKS+FSFL
Subjt:  RARAGPESSSDMNSSKWKKQQQS-PSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

Arabidopsis top hits

e value

%identity

Alignment

AT3G27730.1 ATP binding;ATP-dependent helicases;DNA helicases

8.8e-31

33.52

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Query:  NPYSTVVLLSHP-QQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLN-VRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFN
        +PYS  VLL  P QQ K+T+KADLIF+EYIGIDLH  L L + N N V  K     P  +PP     I DD  P+    +N            D MPSF 
Subjt:  NPYSTVVLLSHP-QQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLN-VRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFN

Query:  LLDEDL-EEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQN
        L+D+D  EE +P    +ED+C II E TVFDHIREKAK FP L  +  N  S  A   S+ K K        +L E +  EL P  + DS     D   N
Subjt:  LLDEDL-EEADPATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQN

Query:  NEYVTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVI-HKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENK
         + + Q +   + P +       S  ++  ++   ++ETIF++I+++S + P +     EN  T              EG + E      + + +    K
Subjt:  NEYVTQQSHITSGPRFIDDDKGESGVQREGSKIIVTEETIFDHIKRKSNSFPVI-HKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENK

Query:  RARAGPESSSDMNSSKWKKQQQS-PSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL
          R   ++ S++ S      ++S  S+   K +CS   A +++  D F+ FKS+FSFL
Subjt:  RARAGPESSSDMNSSKWKKQQQS-PSVGNRKNWCSLQTATETSEVDPFVAFKSVFSFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTAACCCATACAGCACAGTTGTTCTTCTCTCACATCCTCAACAAGGAAAGTTGACTATCAAAGCTGATCTTATTTTTGATGAATACATTGGCATTGATCTCCACCG
AAAACTGCAACTAATGGAACAAAATTTAAACGTGAGAAACAAATGGGGAAGAATGCCACCATCCTCCCATCCACCTGAGGAAGTATATGTCATTGATGACGACGGTGAAC
CTCTACCACAAGCTGCAACGAATGAGTTGCCCATTTCTGGCGACTTGAACCCATTACTTGACTCCATGCCGAGTTTCAACCTCTTAGACGAAGACTTGGAGGAAGCCGAT
CCTGCAACTGGCAACGATGAAGATGAATGCAAAATCATCACTGAAAGAACTGTATTTGACCACATACGTGAGAAAGCCAAAAACTTTCCTATGTTGGCTGCATCAAAAAA
TAATGCTCATTCACCAGCAGCAGTGACATATAGTCTAACTAAAAATAAGCAGCCGCTAGAACTCCAGGTTGAAGCATTGGAAGAGAAACATAGAATTGAACTTTCCCCTC
ATGCCAAATTGGATTCATTTTCAGGATTCAGAGACGAAGTACAGAATAATGAATATGTGACTCAACAAAGCCACATCACCTCTGGACCACGTTTCATTGATGATGATAAA
GGGGAATCTGGTGTCCAGAGAGAAGGAAGTAAAATAATTGTAACTGAGGAAACCATATTCGATCATATTAAAAGAAAGAGCAACAGTTTTCCAGTGATACACAAAAATTG
TGAAAATGAAAGGACAGGAGGAGGAGGAGGAGGAGGAGATGGATACAGGAAATTGAATGAGGGTTGTTCAGTGGAATCCATGGGAATGGTGTGTTTTGATATATCGATGA
TGAAGGAAAACAAGAGGGCACGAGCAGGGCCAGAGAGCAGCAGTGATATGAATAGCAGCAAGTGGAAGAAGCAGCAGCAGAGTCCATCTGTAGGAAACAGAAAGAATTGG
TGCTCCTTACAAACTGCCACGGAAACCAGTGAAGTCGATCCTTTTGTTGCGTTTAAGAGCGTTTTTTCATTCCTTTGA

mRNA sequence

Show/hide mRNA sequence

GCCATATTAGTTATCATTTCGATTATGGGTAACCCATACAGCACAGTTGTTCTTCTCTCACATCCTCAACAAGGAAAGTTGACTATCAAAGCTGATCTTATTTTTGATGA
ATACATTGGCATTGATCTCCACCGAAAACTGCAACTAATGGAACAAAATTTAAACGTGAGAAACAAATGGGGAAGAATGCCACCATCCTCCCATCCACCTGAGGAAGTAT
ATGTCATTGATGACGACGGTGAACCTCTACCACAAGCTGCAACGAATGAGTTGCCCATTTCTGGCGACTTGAACCCATTACTTGACTCCATGCCGAGTTTCAACCTCTTA
GACGAAGACTTGGAGGAAGCCGATCCTGCAACTGGCAACGATGAAGATGAATGCAAAATCATCACTGAAAGAACTGTATTTGACCACATACGTGAGAAAGCCAAAAACTT
TCCTATGTTGGCTGCATCAAAAAATAATGCTCATTCACCAGCAGCAGTGACATATAGTCTAACTAAAAATAAGCAGCCGCTAGAACTCCAGGTTGAAGCATTGGAAGAGA
AACATAGAATTGAACTTTCCCCTCATGCCAAATTGGATTCATTTTCAGGATTCAGAGACGAAGTACAGAATAATGAATATGTGACTCAACAAAGCCACATCACCTCTGGA
CCACGTTTCATTGATGATGATAAAGGGGAATCTGGTGTCCAGAGAGAAGGAAGTAAAATAATTGTAACTGAGGAAACCATATTCGATCATATTAAAAGAAAGAGCAACAG
TTTTCCAGTGATACACAAAAATTGTGAAAATGAAAGGACAGGAGGAGGAGGAGGAGGAGGAGATGGATACAGGAAATTGAATGAGGGTTGTTCAGTGGAATCCATGGGAA
TGGTGTGTTTTGATATATCGATGATGAAGGAAAACAAGAGGGCACGAGCAGGGCCAGAGAGCAGCAGTGATATGAATAGCAGCAAGTGGAAGAAGCAGCAGCAGAGTCCA
TCTGTAGGAAACAGAAAGAATTGGTGCTCCTTACAAACTGCCACGGAAACCAGTGAAGTCGATCCTTTTGTTGCGTTTAAGAGCGTTTTTTCATTCCTTTGACTCCTCCT
TTCTCAATCTTAATATGTTTTTCTTTTTCTCTCTCGGAGGCTATGCCGTACTTTGGAATAATATAATTAGTCCCGGCTCGGCTGGCAGCACAAGGCAGCCGTCCAATAAA
ATTTGTCAAACCACGACTTTTTTTTTTCTTTTAAAAAAGGACCATTGCAGATGGGAAAGTAGGATGAGGTTAGATGTAGGTTGGTTTG

Protein sequence

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MGNPYSTVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSSHPPEEVYVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLLDEDLEEAD
PATGNDEDECKIITERTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHAKLDSFSGFRDEVQNNEYVTQQSHITSGPRFIDDDK
GESGVQREGSKIIVTEETIFDHIKRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNEGCSVESMGMVCFDISMMKENKRARAGPESSSDMNSSKWKKQQQSPSVGNRKNW
CSLQTATETSEVDPFVAFKSVFSFL

Cmc09g0241701 (gene) of Melon (Charmono) v1.1 genome