| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 3.8e-200 | 82.62 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE H RNHQ R+K+VLKE+ KNATD+PSSSTKVVDK Q+H SQEL PRRSGRVV QP+RYLGL E QIIIPDDG+EDPLT+KQ MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKAM+LEMESMY N VWTLVD P+DVKPIGCKWIYKRKRDQ GKVQTFKA+LVAKGYTQKEG+D EETFSPVAM+KSIRILLSIATFY+YEIWQMDVKT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLNGNLEESIYMVQPE FI + QEQKVCKLQKSIYGLKQAS+SWNIRFDT IKSYGFEQNVDEPCVYK+I+ S VAFL+LYVDDILLIGND+ +LTD+K+
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WL TQFQMKDL AQY+LGIQIVRNRKN+TLAMSQ SYID++LSRYKM NSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY+S VGSLMY MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
DICY VGIVSRYQSN G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| KAA0025729.1 gag/pol protein [Cucumis melo var. makuwa] | 9.6e-188 | 80.95 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE HIRNHQTR+KLVL+EISKNATDRPSSSTK+VDKT NIGQTHPSQEL EPRRS RVVRQPD YLGLS+AQIIIPDDGIEDPLT+KQ MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKA+DL+MESMYSN VWTLVDQ ++V+PIGC+WIYKRKRDQ GKVQTFKA+LVAKGYTQ EGID EETFSPV MIKSIRILLSIATFYDYEIW MDVKT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLNGNLEESIYMVQ E FIQKGQEQK NVDEPCVYKRII S VAFLVLYVDDILLIGND+GHLTDIKE
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WLATQFQM DLENA YV GIQIVRNRKN+TLA+SQTSYID+MLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAS VGSLM+ MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
DICY V IVSRYQSN G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-197 | 88.49 | Show/hide |
Query: KNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQ
+N +DRPSSSTKVVDKT NIGQTH SQELGE RRSGRVVRQ +RYLGLSEAQIIIP+D IEDPLTFKQ NDVD D+WIKAMDL+MESMYSN VWTLVDQ
Subjt: KNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQ
Query: PNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKG
PN+++PIGCKWIYKRKRDQ KVQTF+A+LVAKGYTQKEGID EETFSP+AMIKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIYMVQPE FIQKG
Subjt: PNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKG
Query: QEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQI
QEQKVCKLQKSIYGLKQAS+SWNIRFDT IKSYGFEQNVDEPCVYKRII STVAFLVLYVDDILLIGN++ HLTDIKEWL TQFQMKDL +AQYVLGIQI
Subjt: QEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQI
Query: VRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRYQ
V+NRKN+TLAMSQTSYID+MLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEV+DMSNIPYAS VGSLMY MLC RPDICY VGIVSRYQ
Subjt: VRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRYQ
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 5.6e-212 | 89.05 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE HIRNHQTR+KLVL+EISKN TDRPSS TKVVDKT NIGQTH QELG+PRRSGRVVRQ DRYLGLSEAQIIIPDDGIEDPLT+K MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKAMDLEMESMYSN VWTLVDQPNDVKPIGCKWIYKRKRDQ GKVQTFKA+LVAKGYTQKEGID EE FS AMIKSIRILLSIATFYDYEIWQMDVKTT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLN NLEESIYMVQPERFIQKGQEQK+CKLQKSIYGLKQAS+S NIRFDT IKSYG EQNVDEPCVYKRI+ STVAFLVLYVDDILLIGND+GHL DIK+
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WLA QFQMKDL NAQYVLG+QIVRNRKN+TLAMSQTSYID+MLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAS VGSLMY MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
+ICY VGIVSR QS G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| TYK06159.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-188 | 81.19 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE HIRNHQTR+KLVL+EISKNATDRPSSSTK+VDKT NIGQTHPSQEL EPRRS RVVRQPD YLGLS+AQIIIPDDGIEDPLT+KQ MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKA+DL+MESMYSN VWTLVDQ ++V+PIGC+WIYKRKRDQ GKVQTFKA+LVAKGYTQKEGID EETFSPV MIKSIRILLSIATFYDYEIW MDVKT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLNGNLEESIYMVQ E FIQKGQEQK NVDEPCVYKRII S VAFLVLYVDDILLIGND+GHLTDIKE
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WLATQFQM DLENA YV GIQIVRNRKN+TLA+SQTSYID+MLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAS VGSLM+ MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
DICY V IVSRYQSN G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SKC9 Gag/pol protein | 4.7e-188 | 80.95 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE HIRNHQTR+KLVL+EISKNATDRPSSSTK+VDKT NIGQTHPSQEL EPRRS RVVRQPD YLGLS+AQIIIPDDGIEDPLT+KQ MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKA+DL+MESMYSN VWTLVDQ ++V+PIGC+WIYKRKRDQ GKVQTFKA+LVAKGYTQ EGID EETFSPV MIKSIRILLSIATFYDYEIW MDVKT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLNGNLEESIYMVQ E FIQKGQEQK NVDEPCVYKRII S VAFLVLYVDDILLIGND+GHLTDIKE
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WLATQFQM DLENA YV GIQIVRNRKN+TLA+SQTSYID+MLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAS VGSLM+ MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
DICY V IVSRYQSN G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| A0A5A7TTA2 Gag/pol protein | 8.5e-198 | 88.49 | Show/hide |
Query: KNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQ
+N +DRPSSSTKVVDKT NIGQTH SQELGE RRSGRVVRQ +RYLGLSEAQIIIP+D IEDPLTFKQ NDVD D+WIKAMDL+MESMYSN VWTLVDQ
Subjt: KNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQ
Query: PNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKG
PN+++PIGCKWIYKRKRDQ KVQTF+A+LVAKGYTQKEGID EETFSP+AMIKSIRILLSIATFYDYEIWQMDVKT FLNGNLEESIYMVQPE FIQKG
Subjt: PNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKG
Query: QEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQI
QEQKVCKLQKSIYGLKQAS+SWNIRFDT IKSYGFEQNVDEPCVYKRII STVAFLVLYVDDILLIGN++ HLTDIKEWL TQFQMKDL +AQYVLGIQI
Subjt: QEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQI
Query: VRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRYQ
V+NRKN+TLAMSQTSYID+MLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEV+DMSNIPYAS VGSLMY MLC RPDICY VGIVSRYQ
Subjt: VRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRYQ
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| A0A5D3BX45 Gag/pol protein | 2.7e-212 | 89.05 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE HIRNHQTR+KLVL+EISKN TDRPSS TKVVDKT NIGQTH QELG+PRRSGRVVRQ DRYLGLSEAQIIIPDDGIEDPLT+K MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKAMDLEMESMYSN VWTLVDQPNDVKPIGCKWIYKRKRDQ GKVQTFKA+LVAKGYTQKEGID EE FS AMIKSIRILLSIATFYDYEIWQMDVKTT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLN NLEESIYMVQPERFIQKGQEQK+CKLQKSIYGLKQAS+S NIRFDT IKSYG EQNVDEPCVYKRI+ STVAFLVLYVDDILLIGND+GHL DIK+
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WLA QFQMKDL NAQYVLG+QIVRNRKN+TLAMSQTSYID+MLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAS VGSLMY MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
+ICY VGIVSR QS G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| A0A5D3C701 Gag/pol protein | 1.2e-188 | 81.19 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE HIRNHQTR+KLVL+EISKNATDRPSSSTK+VDKT NIGQTHPSQEL EPRRS RVVRQPD YLGLS+AQIIIPDDGIEDPLT+KQ MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKA+DL+MESMYSN VWTLVDQ ++V+PIGC+WIYKRKRDQ GKVQTFKA+LVAKGYTQKEGID EETFSPV MIKSIRILLSIATFYDYEIW MDVKT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLNGNLEESIYMVQ E FIQKGQEQK NVDEPCVYKRII S VAFLVLYVDDILLIGND+GHLTDIKE
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WLATQFQM DLENA YV GIQIVRNRKN+TLA+SQTSYID+MLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAS VGSLM+ MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
DICY V IVSRYQSN G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| E2GK51 Gag/pol protein (Fragment) | 1.8e-200 | 82.62 | Show/hide |
Query: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
FLEE H RNHQ R+K+VLKE+ KNATD+PSSSTKVVDK Q+H SQEL PRRSGRVV QP+RYLGL E QIIIPDDG+EDPLT+KQ MNDVD D+W
Subjt: FLEEGHIRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQTHPSQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRW
Query: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
IKAM+LEMESMY N VWTLVD P+DVKPIGCKWIYKRKRDQ GKVQTFKA+LVAKGYTQKEG+D EETFSPVAM+KSIRILLSIATFY+YEIWQMDVKT
Subjt: IKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTT
Query: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
FLNGNLEESIYMVQPE FI + QEQKVCKLQKSIYGLKQAS+SWNIRFDT IKSYGFEQNVDEPCVYK+I+ S VAFL+LYVDDILLIGND+ +LTD+K+
Subjt: FLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKE
Query: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
WL TQFQMKDL AQY+LGIQIVRNRKN+TLAMSQ SYID++LSRYKM NSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY+S VGSLMY MLCTRP
Subjt: WLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRP
Query: DICYLVGIVSRYQSNLGCDH
DICY VGIVSRYQSN G DH
Subjt: DICYLVGIVSRYQSNLGCDH
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.5e-53 | 35.61 | Show/hide |
Query: PLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSI
P +F + D W +A++ E+ + N WT+ +P + + +W++ K +++G +KA+LVA+G+TQK ID EETF+PVA I S R +LS+
Subjt: PLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSI
Query: ATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVY---KRIIKSTVAFLVLY
Y+ ++ QMDVKT FLNG L+E IYM P+ VCKL K+IYGLKQA++ W F+ +K F + + C+Y K I + +++LY
Subjt: ATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVY---KRIIKSTVAFLVLY
Query: VDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLP----YRYGIHLSKEQCPKTPQEVE
VDD+++ D+ + + K +L +F+M DL ++ +GI+I + + +SQ++Y+ ++LS++ M N P Y + S E C
Subjt: VDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLP----YRYGIHLSKEQCPKTPQEVE
Query: DMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRYQS
N P S +G LMY MLCTRPD+ V I+SRY S
Subjt: DMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRYQS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.8e-86 | 41.57 | Show/hide |
Query: IRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQT---------------HPSQ--ELGEP-RRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTF
++N N + + S N T S++ +V ++ G+ HP+Q E +P RRS R + RY S ++I DD +P +
Subjt: IRNHQTRNKLVLKEISKNATDRPSSSTKVVDKTWNIGQT---------------HPSQ--ELGEP-RRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTF
Query: KQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFY
K+ ++ + ++ +KAM EMES+ N + LV+ P +P+ CKW++K K+D K+ +KA+LV KG+ QK+GID +E FSPV + SIR +LS+A
Subjt: KQEMNDVDYDRWIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFY
Query: DYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVY-KRIIKSTVAFLVLYVDDILL
D E+ Q+DVKT FL+G+LEE IYM QPE F G++ VCKL KS+YGLKQA + W ++FD+ +KS + + +PCVY KR ++ L+LYVDD+L+
Subjt: DYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVY-KRIIKSTVAFLVLYVDDILL
Query: IGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAST
+G D G + +K L+ F MKDL AQ +LG++IVR R +R L +SQ YI+R+L R+ M N+K P + LSK+ CP T +E +M+ +PY+S
Subjt: IGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAST
Query: VGSLMYTMLCTRPDICYLVGIVSRYQSNLGCDH
VGSLMY M+CTRPDI + VG+VSR+ N G +H
Subjt: VGSLMYTMLCTRPDICYLVGIVSRYQSNLGCDH
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| P25600 Putative transposon Ty5-1 protein YCL074W | 3.3e-21 | 31.65 | Show/hide |
Query: MDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGH
MDV T FLN ++E IY+ QP F+ + V +L +YGLKQA WN + T+K GF ++ E +Y R ++ +YVDD+L+
Subjt: MDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGH
Query: LTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYT
+K+ L + MKDL LG+ I N + +S YI + S +++ K P + SK T ++D++ PY S VG L++
Subjt: LTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYT
Query: MLCTRPDICYLVGIVSRY
RPDI Y V ++SR+
Subjt: MLCTRPDICYLVGIVSRY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.0e-51 | 34.97 | Show/hide |
Query: SQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLV-DQPNDVKPIGCKWIYKRKRDQVGKVQ
+ +G ++G + P L +S A +P T Q + D +RW AM E+ + N+ W LV P+ V +GC+WI+ +K + G +
Subjt: SQELGEPRRSGRVVRQPDRYLGLSEAQIIIPDDGIEDPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLV-DQPNDVKPIGCKWIYKRKRDQVGKVQ
Query: TFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNI
+KA+LVAKGY Q+ G+D ETFSPV SIRI+L +A + I Q+DV FL G L + +YM QP FI K + VCKL+K++YGLKQA ++W +
Subjt: TFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNI
Query: RFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRY
+ + GF +V + ++ ++ ++++YVDDIL+ GND L + + L+ +F +KD E Y LGI+ R L +SQ YI +L+R
Subjt: RFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRY
Query: KMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRY
M +K P LS K E Y VGSL Y + TRPDI Y V +S++
Subjt: KMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIVSRY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.6e-52 | 36.39 | Show/hide |
Query: DPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLV-DQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILL
+P T Q M D DRW +AM E+ + N+ W LV P V +GC+WI+ +K + G + +KA+LVAKGY Q+ G+D ETFSPV SIRI+L
Subjt: DPLTFKQEMNDVDYDRWIKAMDLEMESMYSNYVWTLV-DQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILL
Query: SIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYV
+A + I Q+DV FL G L + +YM QP F+ K + VC+L+K+IYGLKQA ++W + T + + GF ++ + ++ ++ ++++YV
Subjt: SIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPERFIQKGQEQKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYV
Query: DDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNI
DDIL+ GND L + L+ +F +K+ E+ Y LGI+ R + L +SQ Y +L+R M +K P L+ K P E
Subjt: DDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNI
Query: PYASTVGSLMYTMLCTRPDICYLVGIVSRYQSNLGCDH
Y VGSL Y + TRPD+ Y V +S+Y DH
Subjt: PYASTVGSLMYTMLCTRPDICYLVGIVSRYQSNLGCDH
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.5e-50 | 34.07 | Show/hide |
Query: WIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKT
W AMD E+ +M + + W + P + KPIGCKW+YK K + G ++ +KA+LVAKGYTQ+EGID ETFSPV + S++++L+I+ Y++ + Q+D+
Subjt: WIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKT
Query: TFLNGNLEESIYMVQPERFIQKGQE----QKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHL
FLNG+L+E IYM P + + + VC L+KSIYGLKQAS+ W ++F T+ +GF Q+ + + +I + +++YVDDI++ N+ +
Subjt: TFLNGNLEESIYMVQPERFIQKGQE----QKVCKLQKSIYGLKQASKSWNIRFDTTIKSYGFEQNVDEPCVYKRIIKSTVAFLVLYVDDILLIGNDIGHL
Query: TDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTM
++K L + F+++DL +Y LG++I R+ + + Q Y +L + K +P + S + + Y +G LMY
Subjt: TDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASTVGSLMYTM
Query: LCTRPDICYLVGIVSRY
+ TR DI + V +S++
Subjt: LCTRPDICYLVGIVSRY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.3e-09 | 38.52 | Show/hide |
Query: FLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSK--KGLLPYRYGIHLSKEQCPKTPQ
+L+LYVDDILL G+ L + L++ F MKDL Y LGIQI + L +SQT Y +++L+ M + K LP + +S + P
Subjt: FLVLYVDDILLIGNDIGHLTDIKEWLATQFQMKDLENAQYVLGIQIVRNRKNRTLAMSQTSYIDRMLSRYKMHNSK--KGLLPYRYGIHLSKEQCPKTPQ
Query: EVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIV
D S+ + S VG+L Y L TRPDI Y V IV
Subjt: EVEDMSNIPYASTVGSLMYTMLCTRPDICYLVGIV
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3e-14 | 41.86 | Show/hide |
Query: WIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIA
W +AM E++++ N W LV P + +GCKW++K K G + KA+LVAKG+ Q+EGI ET+SPV +IR +L++A
Subjt: WIKAMDLEMESMYSNYVWTLVDQPNDVKPIGCKWIYKRKRDQVGKVQTFKAQLVAKGYTQKEGIDNEETFSPVAMIKSIRILLSIA
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