CuGenDBv2

Gene ID	Cmc09g0242181
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome b
Genome location	CMiso1.1chr09:4518095..4518295
RNA-Seq Expression	Cmc09g0242181
Synteny	Cmc09g0242181
Gene Ontology terms	GO:0022904 - respiratory electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0045275 - respiratory chain complex III (cellular component) GO:0008121 - ubiquinol-cytochrome-c reductase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR005798 - Cytochrome b/b6, C-terminal IPR027387 - Cytochrome b/b6-like domain superfamily IPR036150 - Cytochrome b/b6, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AFA35878.1 apocytochrome b, partial [Danae racemosa]

1.4e-21

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

AFA35879.1 apocytochrome b, partial [Dasylirion longissimum]

1.4e-21

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

AFA35886.1 apocytochrome b, partial [Polygonatum multiflorum]

1.4e-21

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

AFA35887.1 apocytochrome b, partial [Ruscus hypophyllum]

1.4e-21

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

PHT82044.1 hypothetical protein T459_15059 [Capsicum annuum]

1.1e-21

74.24

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSLSFSFF
        +WIFYAPNVLG+PDNYIPANP+   PHI+ KWYFLPIHAILYSIP+K+G V+ IAPIFMS+ F+ F
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSLSFSFF

TrEMBL top hits

e value

%identity

Alignment

A0A2G2ZJE2 Cytochrome b

5.3e-22

74.24

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSLSFSFF
        +WIFYAPNVLG+PDNYIPANP+   PHI+ KWYFLPIHAILYSIP+K+G V+ IAPIFMS+ F+ F
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSLSFSFF

A0A453HT68 Cytochrome b

6.9e-22

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIF+APNVLG+PDNYIPANP+PT PHIVS+WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

I1TJ57 Cytochrome b (Fragment)

6.9e-22

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

I1TJ61 Cytochrome b (Fragment)

6.9e-22

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

I1TJ68 Cytochrome b (Fragment)

6.9e-22

80.33

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

SwissProt top hits

e value

%identity

Alignment

P04165 Cytochrome b

7.1e-24

78.69

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIF+APNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+SL
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

P05718 Cytochrome b

1.6e-23

78.69

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+ L
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

P29757 Cytochrome b

1.9e-21

75.41

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+ T PHIV +WYFLPI+AIL SIP+KVGGVA IA +F+ L
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

Q94S37 Cytochrome b

1.3e-22

77.05

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        ++IFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+ L
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

Q9ZZT8 Cytochrome b

1.6e-23

78.69

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+PT PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+ L
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

Arabidopsis top hits

e value

%identity

Alignment

AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal

5.6e-24

77.05

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+ T PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+ L
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

ATMG00220.1 apocytochrome b

5.6e-24

77.05

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Query:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL
        +WIFYAPNVLG+PDNYIPANP+ T PHIV +WYFLPIHAIL SIP+K GGVA IAP+F+ L
Subjt:  MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSL

Sequences

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CDS sequence

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ATGTGGATTTTTTATGCTCCAAATGTCTTGGGGAATCCTGACAATTATATACCTGCTAATCCATTGCCCACCTTGCCTCATATTGTGTCGAAATGGTATTTCCTA
CCAATCCATGCCATTCTTTATAGTATACCTAACAAAGTGGGAGGTGTAGCAACAATAGCACCAATTTTTATGTCTCTTAGCTTTTCCTTTTTCTAA

mRNA sequence

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Protein sequence

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MWIFYAPNVLGNPDNYIPANPLPTLPHIVSKWYFLPIHAILYSIPNKVGGVATIAPIFMSLSFSFF

Cmc09g0242181 (gene) of Melon (Charmono) v1.1 genome