; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0242531 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0242531
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE2
Genome locationCMiso1.1chr09:4835447..4837673
RNA-Seq ExpressionCmc09g0242531
SyntenyCmc09g0242531
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037647.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.4e-3595.56Show/hide
Query:  NAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
        + ADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMTTRAK NIFNQKILLSTSLIDWSLME TRVKDALATPSWKHSMNEE
Subjt:  NAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
KAA0045871.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-3867.1Show/hide
Query:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN
        N TT SPP + GP+ SS  A+SNPSPSAHYPT    QSPTSP AH S +  SSPI  F LNPSNLNAAD S L S+SSSSSTS L I H +TL  N   N
Subjt:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN

Query:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
        TI LPSHPMTTRAK  IF  K LLSTSLID SL E T+VKD LATPSWK +M+EE
Subjt:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
KAA0054967.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-2175.71Show/hide
Query:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIG
        MTT+AK  IF    LLSTSLIDWSL +PTRVKDAL TPSWK + +EEYN+LVKNQTWHL+PPS DLNVIG
Subjt:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIG
KAA0057476.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-3160.39Show/hide
Query:  QGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMT
        Q  +   H     PSP  HYPT    QSP S S+  S    SS I SFSL+ SNLNA D SH+ S SSSSS S L I   D L+ + R NTI LPS PMT
Subjt:  QGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMT

Query:  TRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQT
        T+AK  IF  K LLST LIDWSL EPTRVKDALATPSWK +MN+EYN+LVKNQT
Subjt:  TRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQT
TYK13717.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-3867.1Show/hide
Query:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN
        N TT SPP + GP+ SS  A+SNPSPSAHYPT    QSPTSP AH S +  SSPI  F LNPSNLNAAD S L S+SSSSSTS L I H +TL  N   N
Subjt:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN

Query:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
        TI LPSHPMTTRAK  IF  K LLSTSLID SL E T+VKD LATPSWK +M+EE
Subjt:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
TrEMBL top hitse value%identityAlignment
A0A5A7T7W3 Putative mitochondrial protein1.7e-3595.56Show/hide
Query:  NAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
        + ADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMTTRAK NIFNQKILLSTSLIDWSLME TRVKDALATPSWKHSMNEE
Subjt:  NAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
A0A5A7TWM4 Putative mitochondrial protein7.2e-3967.1Show/hide
Query:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN
        N TT SPP + GP+ SS  A+SNPSPSAHYPT    QSPTSP AH S +  SSPI  F LNPSNLNAAD S L S+SSSSSTS L I H +TL  N   N
Subjt:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN

Query:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
        TI LPSHPMTTRAK  IF  K LLSTSLID SL E T+VKD LATPSWK +M+EE
Subjt:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
A0A5D3CP94 Putative mitochondrial protein7.2e-3967.1Show/hide
Query:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN
        N TT SPP + GP+ SS  A+SNPSPSAHYPT    QSPTSP AH S +  SSPI  F LNPSNLNAAD S L S+SSSSSTS L I H +TL  N   N
Subjt:  NKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSN

Query:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
        TI LPSHPMTTRAK  IF  K LLSTSLID SL E T+VKD LATPSWK +M+EE
Subjt:  TISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEE
A0A5D3DGN1 Putative mitochondrial protein6.1e-2275.71Show/hide
Query:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIG
        MTT+AK  IF    LLSTSLIDWSL +PTRVKDAL TPSWK + +EEYN+LVKNQTWHL+PPS DLNVIG
Subjt:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIG
A0A5D3E2Q4 Putative mitochondrial protein1.1e-3160.39Show/hide
Query:  QGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMT
        Q  +   H     PSP  HYPT    QSP S S+  S    SS I SFSL+ SNLNA D SH+ S SSSSS S L I   D L+ + R NTI LPS PMT
Subjt:  QGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSHLSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMT

Query:  TRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQT
        T+AK  IF  K LLST LIDWSL EPTRVKDALATPSWK +MN+EYN+LVKNQT
Subjt:  TRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQT
SwissProt top hitse value%identityAlignment
P92520 Uncharacterized mitochondrial protein AtMg008201.4e-0738.67Show/hide
Query:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIGSKWVF
        M TR+K  I       S ++      EP  V  AL  P W  +M EE ++L +N+TW L+PP  + N++G KWVF
Subjt:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIGSKWVF
Arabidopsis top hitse value%identityAlignment
ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.0e-0838.67Show/hide
Query:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIGSKWVF
        M TR+K  I       S ++      EP  V  AL  P W  +M EE ++L +N+TW L+PP  + N++G KWVF
Subjt:  MTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIGSKWVF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCCCAATTTTACCCATTCCCCACTGAATTCATCATTTTCCTCTTTAAATTCGAATGTGTCCAATTCAATTTTCTCAAATCCCAACCCATTATCTCCGTGCAATAC
TCCAAATAAAACCACCTATTCTCCACCGACTAATCAAGGTCCAATTATTTCTTCTCATCGTGCCTACTCAAACCCAAGTCCATCGGCCCACTATCCTACATTCCTACAGG
ACCAATCCCCTACTTCGCCGTCGGCCCACCTTTCACCCTACCTTATTTCTTCACCGATTGCCTCTTTCTCACTAAACCCATCTAATCTAAATGCAGCCGACACCTCTCAT
CTTTCCTCCTCCTCCTCTTCTTCTTCAACAAGTTCTTTATCGATCTTCCATCCAGACACCTTAGCCATAAACTCCCGCTCAAATACCATCTCTTTACCCTCTCATCCTAT
GACAACTCGGGCTAAAGTGAATATATTCAATCAAAAAATCCTTCTCTCCACATCTTTGATTGACTGGTCATTAATGGAACCTACGAGGGTTAAGGATGCTTTGGCTACTC
CCTCTTGGAAACACTCGATGAATGAGGAGTATAATTCTCTAGTAAAAAATCAAACATGGCACCTAATTCCACCATCTTCAGATTTAAATGTGATTGGCAGTAAGTGGGTA
TTTTGA
mRNA sequenceShow/hide mRNA sequence
CCCACCATTACCTTTGTCAATGCACCCCAATTTTACCCATTCCCCACTGAATTCATCATTTTCCTCTTTAAATTCGAATGTGTCCAATTCAATTTTCTCAAATCCCAACC
CATTATCTCCGTGCAATACTCCAAATAAAACCACCTATTCTCCACCGACTAATCAAGGTCCAATTATTTCTTCTCATCGTGCCTACTCAAACCCAAGTCCATCGGCCCAC
TATCCTACATTCCTACAGGACCAATCCCCTACTTCGCCGTCGGCCCACCTTTCACCCTACCTTATTTCTTCACCGATTGCCTCTTTCTCACTAAACCCATCTAATCTAAA
TGCAGCCGACACCTCTCATCTTTCCTCCTCCTCCTCTTCTTCTTCAACAAGTTCTTTATCGATCTTCCATCCAGACACCTTAGCCATAAACTCCCGCTCAAATACCATCT
CTTTACCCTCTCATCCTATGACAACTCGGGCTAAAGTGAATATATTCAATCAAAAAATCCTTCTCTCCACATCTTTGATTGACTGGTCATTAATGGAACCTACGAGGGTT
AAGGATGCTTTGGCTACTCCCTCTTGGAAACACTCGATGAATGAGGAGTATAATTCTCTAGTAAAAAATCAAACATGGCACCTAATTCCACCATCTTCAGATTTAAATGT
GATTGGCAGTAAGTGGGTATTTTGAATTAGAATTAAGAGGAATTCAAATGGGACGATCCAACGGTATAAGGCACGTCTTGTTTCCAAGGGATTTCATCAAAACCCGGGTG
TTGATTTCTTTGAAACATTCAATCCGGTGGTTAAAGCTACGATAACACGAGTAGTCCTCAGCTTAGCAGTTTCGAAAGGTTGTTAAACGGGCACTTCGATATATCAGTGG
TACTAAGCATTATGGCCTTTTATTTCAACCAAATATTGACTTGTCTATAACTGCTTTCTCTGATGCCGACTGGGCTTCAAGTATTGATGATCGCAAGTCAGTTGCTGCAT
ACTATGTATTTGTAGGTCCAAACTTGGGGTAATTGAATTATCCTCTCGTTTGAGGGAGAATATTAGAGAGGTCGCCACACAATCAATACACATGGATCCTCAGCAAATGC
CACCTCAACATCCTCATAGAATTATCATAAAATTCTAGAACACTCAAATGGTTAAAAATTGGTTGGAGGAATATTTCCTCAACCAATGTCATGCTTACACTTGTATAAAT
TGTATTGGGTCTTTCCAATTATTTTATTATTTTCCTTTCCATCATTATAGGATTTACCACCGTAAAAATTTGTCCTTATCTTCATTCATTAATACACAAGAGAAAAGACA
AAAATATTATCTCATCTAAATCTCTCCTCCT
Protein sequenceShow/hide protein sequence
MHPNFTHSPLNSSFSSLNSNVSNSIFSNPNPLSPCNTPNKTTYSPPTNQGPIISSHRAYSNPSPSAHYPTFLQDQSPTSPSAHLSPYLISSPIASFSLNPSNLNAADTSH
LSSSSSSSSTSSLSIFHPDTLAINSRSNTISLPSHPMTTRAKVNIFNQKILLSTSLIDWSLMEPTRVKDALATPSWKHSMNEEYNSLVKNQTWHLIPPSSDLNVIGSKWV
F