; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0242541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0242541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
Genome locationCMiso1.1chr09:4846270..4846956
RNA-Seq ExpressionCmc09g0242541
SyntenyCmc09g0242541
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73523.1 gag-pol polyprotein [Glycine max]2.0e-9473.66Show/hide
Query:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN
        GT VD K YRSMIGSLLYL ASRPDI YAVG+CARYQ++P+ISHLN VKRI+KYV+GT+D+GI+Y + +S  LVGYCDADW GSADD+KSTSGGCF+L N
Subjt:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN

Query:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ
        NL SWFSKKQNC+SLSTAEAEYIA GS C+Q++WMK ML EY + Q VMTLYCDN+SAI+ISKNPVQHSRTKHIDIRHH+I DL+++KVITL+H+ +  Q
Subjt:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ

Query:  LADIFTKPLDATTFEHLRTCLGVC
        +ADIFTK LDA  FE LR  LG+C
Subjt:  LADIFTKPLDATTFEHLRTCLGVC

AAO73529.1 gag-pol polyprotein [Glycine max]4.4e-9473.21Show/hide
Query:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN
        GT VD  LYRSMIGSLLYL ASRPDI YAVG+CARYQ++P+ISHLN VKRI+KYV+GT+D+GI+Y + +   LVGYCDADW GSADD+KSTSGGCF+L N
Subjt:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN

Query:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ
        NL SWFSKKQNC+SLSTAEAEYIA GS C+Q++WMK ML EY + Q VMTLYCDN+SAI+ISKNPVQHSRTKHIDIRHH+I +L+++KVITLEH+ +  Q
Subjt:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ

Query:  LADIFTKPLDATTFEHLRTCLGVC
        +ADIFTK LDA  FE LR  LG+C
Subjt:  LADIFTKPLDATTFEHLRTCLGVC

KAA0034956.1 F5J5.1 [Cucumis melo var. makuwa]9.4e-9779.64Show/hide
Query:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN
        T +DHKLYRS+I SLLYL ASRPDIAYAVGICA++QSDPR SHL  VKRIIKYVHGTTDFGILY YDT+  LVGYCDADW+GSADD++STS GCFFL   
Subjt:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN

Query:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL
           WFSKKQ C+SLST E EYIA GSGCTQ+IWMKNML+EYGI Q VMTLYCDN+SAIDISK PVQHS+TKHIDIRHHFI +LIENK+ITL+H+RS SQL
Subjt:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL

Query:  ADIFTKPLDATTFEHLRTCLG
        ADIFTKPLD TTFEHLR  LG
Subjt:  ADIFTKPLDATTFEHLRTCLG

KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.1e-10079.19Show/hide
Query:  DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFS
        DHKLYRS++GSLLYL ASRP+IAY VGICA YQ+DPRI+HL AVKRI+KYVHGT+DFG++Y YDT+  LVGYCDADW GSADD+KSTSGGCFFL NNL S
Subjt:  DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFS

Query:  WFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADI
        W SKKQNC+SLST EAEYIA GSGCTQ+IWMKNML+EYG  Q  MTLYCDN SAIDISKNPVQHSRTKHIDIRHHFI +L+E+KVI L+HIRSN QL DI
Subjt:  WFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADI

Query:  FTKPLDATTFEHLRTCLGVCK
        FTKPLDA++FE+LR  LGVC+
Subjt:  FTKPLDATTFEHLRTCLGVCK

TYK21311.1 F5J5.1 [Cucumis melo var. makuwa]3.2e-9779.73Show/hide
Query:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN
        T +DHKLYRS+I SLLYL ASRPDIAYAVGICA++QSDPR SHL  VKRIIKYVHGTTDFGILY YDT+  LVGYCDADW+GSADD++STS GCFFL   
Subjt:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN

Query:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL
           WFSKKQ C+SLST E EYIA GSGCTQ+IWMKNML+EYGI Q VMTLYCDN+SAIDISK PVQHS+TKHIDIRHHFI +LIENK+ITL+H+RS SQL
Subjt:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL

Query:  ADIFTKPLDATTFEHLRTCLGV
        ADIFTKPLD TTFEHLR  LGV
Subjt:  ADIFTKPLDATTFEHLRTCLGV

TrEMBL top hitse value%identityAlignment
A0A5A7SYI8 F5J5.14.6e-9779.64Show/hide
Query:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN
        T +DHKLYRS+I SLLYL ASRPDIAYAVGICA++QSDPR SHL  VKRIIKYVHGTTDFGILY YDT+  LVGYCDADW+GSADD++STS GCFFL   
Subjt:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN

Query:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL
           WFSKKQ C+SLST E EYIA GSGCTQ+IWMKNML+EYGI Q VMTLYCDN+SAIDISK PVQHS+TKHIDIRHHFI +LIENK+ITL+H+RS SQL
Subjt:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL

Query:  ADIFTKPLDATTFEHLRTCLG
        ADIFTKPLD TTFEHLR  LG
Subjt:  ADIFTKPLDATTFEHLRTCLG

A0A5D3DCC3 F5J5.11.6e-9779.73Show/hide
Query:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN
        T +DHKLYRS+I SLLYL ASRPDIAYAVGICA++QSDPR SHL  VKRIIKYVHGTTDFGILY YDT+  LVGYCDADW+GSADD++STS GCFFL   
Subjt:  TEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENN

Query:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL
           WFSKKQ C+SLST E EYIA GSGCTQ+IWMKNML+EYGI Q VMTLYCDN+SAIDISK PVQHS+TKHIDIRHHFI +LIENK+ITL+H+RS SQL
Subjt:  LFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQL

Query:  ADIFTKPLDATTFEHLRTCLGV
        ADIFTKPLD TTFEHLR  LGV
Subjt:  ADIFTKPLDATTFEHLRTCLGV

A0A5D3DLL1 Gag-pol polyprotein1.5e-10079.19Show/hide
Query:  DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFS
        DHKLYRS++GSLLYL ASRP+IAY VGICA YQ+DPRI+HL AVKRI+KYVHGT+DFG++Y YDT+  LVGYCDADW GSADD+KSTSGGCFFL NNL S
Subjt:  DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFS

Query:  WFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADI
        W SKKQNC+SLST EAEYIA GSGCTQ+IWMKNML+EYG  Q  MTLYCDN SAIDISKNPVQHSRTKHIDIRHHFI +L+E+KVI L+HIRSN QL DI
Subjt:  WFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADI

Query:  FTKPLDATTFEHLRTCLGVCK
        FTKPLDA++FE+LR  LGVC+
Subjt:  FTKPLDATTFEHLRTCLGVCK

Q84VH6 Gag-pol polyprotein2.1e-9473.21Show/hide
Query:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN
        GT VD  LYRSMIGSLLYL ASRPDI YAVG+CARYQ++P+ISHLN VKRI+KYV+GT+D+GI+Y + +   LVGYCDADW GSADD+KSTSGGCF+L N
Subjt:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN

Query:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ
        NL SWFSKKQNC+SLSTAEAEYIA GS C+Q++WMK ML EY + Q VMTLYCDN+SAI+ISKNPVQHSRTKHIDIRHH+I +L+++KVITLEH+ +  Q
Subjt:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ

Query:  LADIFTKPLDATTFEHLRTCLGVC
        +ADIFTK LDA  FE LR  LG+C
Subjt:  LADIFTKPLDATTFEHLRTCLGVC

Q84VI2 Gag-pol polyprotein9.5e-9573.66Show/hide
Query:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN
        GT VD K YRSMIGSLLYL ASRPDI YAVG+CARYQ++P+ISHLN VKRI+KYV+GT+D+GI+Y + +S  LVGYCDADW GSADD+KSTSGGCF+L N
Subjt:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN

Query:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ
        NL SWFSKKQNC+SLSTAEAEYIA GS C+Q++WMK ML EY + Q VMTLYCDN+SAI+ISKNPVQHSRTKHIDIRHH+I DL+++KVITL+H+ +  Q
Subjt:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQ

Query:  LADIFTKPLDATTFEHLRTCLGVC
        +ADIFTK LDA  FE LR  LG+C
Subjt:  LADIFTKPLDATTFEHLRTCLGVC

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.4e-4241.1Show/hide
Query:  RSMIGSLLY-LIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFE--LVGYCDADWLGSADDQKSTSGGCF-FLENNLFSW
        RS+IG L+Y ++ +RPD+  AV I +RY S         +KR+++Y+ GT D  +++  + +FE  ++GY D+DW GS  D+KST+G  F   + NL  W
Subjt:  RSMIGSLLY-LIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFE--LVGYCDADWLGSADDQKSTSGGCF-FLENNLFSW

Query:  FSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGI-MQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADI
         +K+QN ++ S+ EAEY+A+     + +W+K +L    I ++  + +Y DN   I I+ NP  H R KHIDI++HF  + ++N VI LE+I + +QLADI
Subjt:  FSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGI-MQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADI

Query:  FTKPLDATTFEHLRTCLGV
        FTKPL A  F  LR  LG+
Subjt:  FTKPLDATTFEHLRTCLGV

P0CV72 Secreted RxLR effector protein 1611.4e-2339.06Show/hide
Query:  YRSMIGSLLYL-IASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFSWFS
        Y S +G+++YL + +RPD+A AVG+ +++ SDP  +H  A+KR+++Y+  T  +G+ +    + +LVGY DADW G  + ++STSG  F L     SW S
Subjt:  YRSMIGSLLYL-IASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFSWFS

Query:  KKQNCISLSTAEAEYIAVGSGCTQMIWM
        KKQ  ++LS+ E EY+A+     + +W+
Subjt:  KKQNCISLSTAEAEYIAVGSGCTQMIWM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.4e-4442.13Show/hide
Query:  YRSMIGSLLY-LIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFSWFS
        Y S +GSL+Y ++ +RPDIA+AVG+ +R+  +P   H  AVK I++Y+ GTT    L F  +   L GY DAD  G  D++KS++G  F       SW S
Subjt:  YRSMIGSLLY-LIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFSWFS

Query:  KKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADIFTK
        K Q C++LST EAEYIA      +MIW+K  L E G+ Q    +YCD+ SAID+SKN + H+RTKHID+R+H+I ++++++ + +  I +N   AD+ TK
Subjt:  KKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADIFTK

Query:  PLDATTFEHLRTCLGV
         +    FE  +  +G+
Subjt:  PLDATTFEHLRTCLGV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.1e-4340.35Show/hide
Query:  GTEV-DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLE
        GT++ D   YR ++GSL YL  +RPDI+YAV   +++   P   HL A+KRI++Y+ GT + GI      +  L  Y DADW G  DD  ST+G   +L 
Subjt:  GTEV-DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLE

Query:  NNLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGI-MQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSN
        ++  SW SKKQ  +  S+ EAEY +V +  ++M W+ ++L E GI +     +YCDNV A  +  NPV HSR KHI I +HFI + +++  + + H+ ++
Subjt:  NNLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGI-MQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSN

Query:  SQLADIFTKPLDATTFEHLRTCLGVCKI
         QLAD  TKPL  T F++  + +GV ++
Subjt:  SQLADIFTKPLDATTFEHLRTCLGVCKI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.8e-4339.47Show/hide
Query:  GTEV-DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLE
        GT++ D   YR ++GSL YL  +RPD++YAV   ++Y   P   H NA+KR+++Y+ GT D GI      +  L  Y DADW G  DD  ST+G   +L 
Subjt:  GTEV-DHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLE

Query:  NNLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGI-MQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSN
        ++  SW SKKQ  +  S+ EAEY +V +  +++ W+ ++L E GI +     +YCDNV A  +  NPV HSR KHI + +HFI + +++  + + H+ ++
Subjt:  NNLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGI-MQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSN

Query:  SQLADIFTKPLDATTFEHLRTCLGVCKI
         QLAD  TKPL    F++    +GV K+
Subjt:  SQLADIFTKPLDATTFEHLRTCLGVCKI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.0e-3339.13Show/hide
Query:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN
        G  VD K YR +IG L+YL  +R DI++AV   +++   PR++H  AV +I+ Y+ GT   G+ Y      +L  + DA +    D ++ST+G C FL  
Subjt:  GTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLEN

Query:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMT-LYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMD
        +L SW SKKQ  +S S+AEAEY A+     +M+W+     E  +     T L+CDN +AI I+ N V H RTKHI+   H + +
Subjt:  NLFSWFSKKQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMT-LYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMD

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.6e-0931.65Show/hide
Query:  LYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGC
        +YL  +RPD+ +AV   +++ S  R + + AV +++ YV GT   G+ Y   +  +L  + D+DW    D ++S +G C
Subjt:  LYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.3e-2235.71Show/hide
Query:  YRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFSWFSK
        +RS++G+L YL  +RPDI+YAV I  +   +P ++  + +KR+++YV GT   G+    ++   +  +CD+DW G    ++ST+G C FL  N+ SW +K
Subjt:  YRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFSWFSK

Query:  KQNCISLSTAEAEYIAVGSGCTQMIW
        +Q  +S S+ E EY A+     ++ W
Subjt:  KQNCISLSTAEAEYIAVGSGCTQMIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGTACTGAAGTCGATCACAAATTGTACAGAAGCATGATTGGAAGCCTTTTATATTTGATAGCAAGTAGACCTGATATTGCCTATGCTGTGGGAATATGTGCTCG
ATATCAGTCAGATCCTCGTATCTCTCATTTAAATGCAGTTAAACGAATAATTAAGTATGTTCATGGAACAACTGACTTCGGGATTCTGTACTTCTACGATACATCCTTTG
AACTAGTTGGATATTGTGATGCCGACTGGCTAGGCTCTGCTGATGATCAGAAAAGCACTTCTGGTGGATGTTTCTTTCTGGAGAATAACCTTTTCTCATGGTTCAGTAAG
AAGCAAAATTGTATTTCTCTGTCAACAGCTGAAGCGGAATATATAGCTGTAGGGAGTGGTTGTACTCAAATGATATGGATGAAAAATATGTTAAATGAATATGGGATTAT
GCAAGGAGTTATGACCTTGTATTGTGATAATGTGAGTGCCATAGATATTTCGAAAAATCCAGTCCAGCATAGTCGCACTAAACATATTGATATAAGGCATCATTTTATTA
TGGATCTCATTGAAAATAAAGTCATCACATTAGAACACATTCGCTCGAACTCACAATTGGCTGACATTTTCACTAAGCCCCTTGATGCAACCACGTTTGAGCATTTACGA
ACGTGTTTAGGAGTGTGTAAAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGTACTGAAGTCGATCACAAATTGTACAGAAGCATGATTGGAAGCCTTTTATATTTGATAGCAAGTAGACCTGATATTGCCTATGCTGTGGGAATATGTGCTCG
ATATCAGTCAGATCCTCGTATCTCTCATTTAAATGCAGTTAAACGAATAATTAAGTATGTTCATGGAACAACTGACTTCGGGATTCTGTACTTCTACGATACATCCTTTG
AACTAGTTGGATATTGTGATGCCGACTGGCTAGGCTCTGCTGATGATCAGAAAAGCACTTCTGGTGGATGTTTCTTTCTGGAGAATAACCTTTTCTCATGGTTCAGTAAG
AAGCAAAATTGTATTTCTCTGTCAACAGCTGAAGCGGAATATATAGCTGTAGGGAGTGGTTGTACTCAAATGATATGGATGAAAAATATGTTAAATGAATATGGGATTAT
GCAAGGAGTTATGACCTTGTATTGTGATAATGTGAGTGCCATAGATATTTCGAAAAATCCAGTCCAGCATAGTCGCACTAAACATATTGATATAAGGCATCATTTTATTA
TGGATCTCATTGAAAATAAAGTCATCACATTAGAACACATTCGCTCGAACTCACAATTGGCTGACATTTTCACTAAGCCCCTTGATGCAACCACGTTTGAGCATTTACGA
ACGTGTTTAGGAGTGTGTAAAATATAG
Protein sequenceShow/hide protein sequence
MVGTEVDHKLYRSMIGSLLYLIASRPDIAYAVGICARYQSDPRISHLNAVKRIIKYVHGTTDFGILYFYDTSFELVGYCDADWLGSADDQKSTSGGCFFLENNLFSWFSK
KQNCISLSTAEAEYIAVGSGCTQMIWMKNMLNEYGIMQGVMTLYCDNVSAIDISKNPVQHSRTKHIDIRHHFIMDLIENKVITLEHIRSNSQLADIFTKPLDATTFEHLR
TCLGVCKI