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Cmc09g0242601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0242601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCMiso1.1chr09:4881243..4883354
RNA-Seq ExpressionCmc09g0242601
SyntenyCmc09g0242601
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE6076342.1 unnamed protein product [Arabidopsis arenosa]2.3e-2566.33Show/hide
Query:  FMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGMKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSE
        F+ S SNT   TLDFLVPRP V VC AWCARIVKFVG  A  + +GG   E     G+ERS+RSS  LARRIV DLT+ WPPNLRPFTSE GLKE SE
Subjt:  FMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGMKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSE

KAE8679465.1 Pentatricopeptide repeat-containing protein [Hibiscus syriacus]1.5e-1153.12Show/hide
Query:  IVKFVGMKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSEADFVVWSFGCWCF----CFLLCFLLFFVS
        +VKFVG KAV  G G L  + L   G   S  SS GLAR +V DLTMNWPPNLRPFTS  GLKEKS+        GC C        L  LLF VS
Subjt:  IVKFVGMKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSEADFVVWSFGCWCF----CFLLCFLLFFVS

KAF9668561.1 hypothetical protein SADUNF_Sadunf14G0016300 [Salix dunnii]5.3e-1457.47Show/hide
Query:  FMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGMKAVADGNGGLWP-EFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRP
        FM S   T + TLD LVP P V+VCQAW A+IV+FVG KAV  GN  L    FL + G E ++RSS GLAR IVKD TMN P N  P
Subjt:  FMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGMKAVADGNGGLWP-EFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRP

TrEMBL top hitse value%identityAlignment
A0A0A0KQX9 Uncharacterized protein2.0e-5494.12Show/hide
Query:  MKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSEADFVVWSFGCWCFCFLLCFLLFFVSVSSMSCSSLCTSFF
        MKAVADGNGGLWPEFLVVAGKERS RSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKS  DFVVWSFGCWCFCFLL FLLFFVSVSS+SCSS+CTSFF
Subjt:  MKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSEADFVVWSFGCWCFCFLLCFLLFFVSVSSMSCSSLCTSFF

Query:  SFVVMGFVVSVDSIIKNPI
        SFVVMGFVVSVDSIIK PI
Subjt:  SFVVMGFVVSVDSIIKNPI

A0A0A9MTX3 Uncharacterized protein8.1e-0877.5Show/hide
Query:  AAFMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGM
        AAFM+S SNTK  TLDFLVPRP V VC AWCAR+VK VGM
Subjt:  AAFMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGM

A0A0A9VGE2 Uncharacterized protein7.5e-0667.5Show/hide
Query:  AAFMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGM
        AAFM + S TK   L+FLVPRP VRVC AWCAR+ K VGM
Subjt:  AAFMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGM

A0A0A9VLF4 Uncharacterized protein8.3e-1351.02Show/hide
Query:  AAFMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGMKAV---ADGNGGLWPEFLVVAG-KERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHG
        AAFM + S TK   L+FLVPRP VRVC AWCAR+ K VGM AV   A+ +G   P   V AG   R   SS G ARR V        P  RP TS HG
Subjt:  AAFMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGMKAV---ADGNGGLWPEFLVVAG-KERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHG

A0A6A2YAD6 Pentatricopeptide repeat-containing protein7.0e-1253.12Show/hide
Query:  IVKFVGMKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSEADFVVWSFGCWCF----CFLLCFLLFFVS
        +VKFVG KAV  G G L  + L   G   S  SS GLAR +V DLTMNWPPNLRPFTS  GLKEKS+        GC C        L  LLF VS
Subjt:  IVKFVGMKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSEADFVVWSFGCWCF----CFLLCFLLFFVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTTCATGGTTTCATTTTCAAACACAAAGAGAAGAACTTTGGATTTCCTGGTGCCTAGGCCTAAAGTGAGGGTGTGCCAAGCATGGTGCGCAAGGATTGTGAA
GTTTGTAGGAATGAAAGCTGTGGCTGATGGGAATGGCGGTTTGTGGCCGGAATTTCTGGTGGTAGCCGGAAAAGAAAGGAGCTGGAGGAGCTCTAAAGGCCTAGCTCGCC
GGATTGTGAAGGATTTAACAATGAATTGGCCACCAAATCTAAGACCCTTTACATCAGAGCATGGCTTGAAAGAGAAATCAGAGGCTGATTTTGTAGTTTGGTCATTTGGG
TGCTGGTGTTTTTGCTTCTTGTTGTGCTTCTTGCTCTTCTTTGTCTCTGTTTCTTCCATGTCTTGTTCTTCTTTGTGCACTTCTTTCTTCTCCTTTGTGGTGATGGGTTT
TGTTGTTTCTGTTGATTCCATAATTAAAAACCCAATCTAA
mRNA sequenceShow/hide mRNA sequence
TTTATCATTTTAAAAAAGTTAATGTTTAGATATTCAAATATAACATAATGTTTTAGATGTGATGCAATGGATGCGAAAGTCCTCTGCGATTTCTCAAATCCAAATAATGG
TGTCTCCTTATCTCTTTAAACTAATCAAACCCAAAAAGGGAAAAATTTGAACTAGTTGAAGGTGACAAATCAATACGACAAATTATGATTCACTAGAAATTCTTCATTTC
TGAGGAAAATCGATAATCCCATTTGGATAAAAATGCCTGCAAAGAAGTGGAACCATACAAATGAAAGCTTCCATTTTATTCTAGTGGTGGTGTTGGTGGTGTACTTGATC
ATGATGACTCGTGGTGCGATAAAGCTCACTGAAAAGGGCCCCTCTTTCTCGACATGATTAATGCCATGGAGTTCGGGGAATCACAAAAAGCTAAGTCTTTTTTCTTTCTC
TCTTTTTTACTTCTCTCTTTAATTTCTTAGACCACAAACTCATCGTGGTGCTGCAGGATTTTGACCTCACTGTTTTAATTGTACCACCCCTCACATGCATCAAGTGTTTG
ATATAATGCCACAGAAAGAAGAAAAAGTAAAGTAGAAAATTCGTTGGGTTTTTTTTTAATTTCATTAATTTGTCTGAATTATGAAATGAATGGGATGTTTTGTATGTTTG
AGTGAATCAATTGCTGATTCGACACTTCATGGTGTATGAAAACAATTTTGTTCTGGGACTTTGTGGATTTCAGTTTTAGCATCTTCTGGGATTGAATCACCTGCAATGTA
ATTCATAACTAACTAGAGAACTTTAAGGAACTACTAAAGAAGATGAACGAGGAAGAACAGAATTTGGAGATGAAGATTAGGAAAGTGAGTAAAATGGGCAAAAGGGCAGG
GATTTTATGGTCTATAATGCAATTCTTCATAATTTATATGTAAAAATTCCATGTTTTTGAAGAGTGGATGCTCTTCCATTTCAACTTTCACAAAACAAGCTGTGTATACA
ATCACGACAATAACAGATATAGACACAGAGGAAATGTATACTGTCAATATAAGAAGTGATCTTACTAGTCTTATTCATTCTGCAGTACAAATGTTCATCTTGGAAAAAAG
GAAAGTGAAAGAAAAAAAAAAAAACAGAAGAGTGTGAACAAATAAACCAATTACCAATTACCAATCAATCCTTTTCTGCTTAGCTTGGCTAATATTGATGATGGAGGAAA
ATGAATAACAATATAATTAGAGGAGAGGCTAATAAGCCATTGCAACAGGAGGAACAGCAAAGCTGATGGTTCTCTGATTAGGCATAGCAAGCATTGCAGTGTGATCCAAG
AAATCTTTAAGAGCAACAACAGATTCCAAAATAGTTCTCAAATCATCGGGATTTCTGTTGGCCAAACACGATCTATGGCTGCCTTCATGGTTTCATTTTCAAACACAAAG
AGAAGAACTTTGGATTTCCTGGTGCCTAGGCCTAAAGTGAGGGTGTGCCAAGCATGGTGCGCAAGGATTGTGAAGTTTGTAGGAATGAAAGCTGTGGCTGATGGGAATGG
CGGTTTGTGGCCGGAATTTCTGGTGGTAGCCGGAAAAGAAAGGAGCTGGAGGAGCTCTAAAGGCCTAGCTCGCCGGATTGTGAAGGATTTAACAATGAATTGGCCACCAA
ATCTAAGACCCTTTACATCAGAGCATGGCTTGAAAGAGAAATCAGAGGCTGATTTTGTAGTTTGGTCATTTGGGTGCTGGTGTTTTTGCTTCTTGTTGTGCTTCTTGCTC
TTCTTTGTCTCTGTTTCTTCCATGTCTTGTTCTTCTTTGTGCACTTCTTTCTTCTCCTTTGTGGTGATGGGTTTTGTTGTTTCTGTTGATTCCATAATTAAAAACCCAAT
CTAATTCTACTTTTCATGGTACAATCAACTGTGTGATGTGTCTCCTTTATTAGCCTTCCTTTGTTTCAATTCAAGTTCACTCTTCATTTTCCCCAAATTAAGCCAA
Protein sequenceShow/hide protein sequence
MAAFMVSFSNTKRRTLDFLVPRPKVRVCQAWCARIVKFVGMKAVADGNGGLWPEFLVVAGKERSWRSSKGLARRIVKDLTMNWPPNLRPFTSEHGLKEKSEADFVVWSFG
CWCFCFLLCFLLFFVSVSSMSCSSLCTSFFSFVVMGFVVSVDSIIKNPI