| GenBank top hits | e value | %identity | Alignment |
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| KAA0037327.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.7e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
M LCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMN+VFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA HKEHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| KAA0047375.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.1e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
MRLCIDYRE NKVTVKN+YPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI KIAFRSRY HY+FIVMSFGLT AP VFMDLMNRVFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA H+EHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| KAA0050376.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.2e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMN+VFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA H+EHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| TYK04344.1 reverse transcriptase [Cucumis melo var. makuwa] | 8.1e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA H+EHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| TYK24123.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.7e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
M LCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMN+VFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA HKEHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T6Z0 Ty3-gypsy retrotransposon protein | 2.3e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
M LCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMN+VFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA HKEHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| A0A5A7U159 Ty3-gypsy retrotransposon protein | 3.9e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
MRLCIDYRE NKVTVKN+YPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI KIAFRSRY HY+FIVMSFGLT AP VFMDLMNRVFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA H+EHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| A0A5A7U866 Ty3-gypsy retrotransposon protein | 3.0e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMN+VFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA H+EHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| A0A5D3BZD2 Reverse transcriptase | 3.9e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA H+EHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| A0A5D3DKH1 Ty3-gypsy retrotransposon protein | 2.3e-55 | 90.08 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
M LCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSDI K AFRSRY HY+FIVMSFGLT AP VFMDLMN+VFKDFLDTFV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
IVFIDDIL+YSKTEA HKEHL
Subjt: IVFIDDILVYSKTEAVHKEHL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 6.5e-23 | 38.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
+R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R+ D K+AFR ++++VM +G++ AP F +N + + ++ V
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
+ ++DDIL++SK+E+ H +H+
Subjt: IVFIDDILVYSKTEAVHKEHL
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| P0CT41 Transposon Tf2-12 polyprotein | 6.5e-23 | 38.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
+R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R+ D K+AFR ++++VM +G++ AP F +N + + ++ V
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
+ ++DDIL++SK+E+ H +H+
Subjt: IVFIDDILVYSKTEAVHKEHL
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| P31843 RNA-directed DNA polymerase homolog | 1.1e-30 | 52.89 | Show/hide |
Query: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
+R+CIDYR L KVT+KNKYP+PR+DDLFD+L AT F+K+DLRSGY Q+RI D K +RY ++F VM FGLT A F +LMN V ++LD FV
Subjt: MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTEAVHKEHL
+V++DD++VY+ EH+
Subjt: IVFIDDILVYSKTEAVHKEHL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 5.0e-23 | 44.17 | Show/hide |
Query: RLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D K AF + Y++ VM FGL AP F M F+D FV
Subjt: RLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFVI
Query: VFIDDILVYSKTEAVHKEHL
V++DDIL++S++ H +HL
Subjt: VFIDDILVYSKTEAVHKEHL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 5.0e-23 | 44.17 | Show/hide |
Query: RLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D K AF + Y++ VM FGL AP F M F+D FV
Subjt: RLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRITDSDISKIAFRSRYRHYDFIVMSFGLTKAPVVFMDLMNRVFKDFLDTFVI
Query: VFIDDILVYSKTEAVHKEHL
V++DDIL++S++ H +HL
Subjt: VFIDDILVYSKTEAVHKEHL
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