| GenBank top hits | e value | %identity | Alignment |
|---|
| TYK06895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0e+00 | 97.65 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| TYK08113.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0e+00 | 97.48 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| TYK13816.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0e+00 | 97.65 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| TYK13925.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0e+00 | 97.48 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| TYK18362.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0e+00 | 97.48 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3C639 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 97.65 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| A0A5D3C896 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 97.48 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| A0A5D3CQU3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 97.48 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| A0A5D3CTU3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 97.65 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| A0A5D3D497 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 97.48 | Show/hide |
Query: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKD SLLIRDNHDKIIAKVQMTKNRM
Subjt: MCGSKSMFIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRM
Query: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
FLLNIQTDVAQCLK CLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCE CLHGKQSRKSFPQESS RA+RPLELVHTDLCGPIKPSSFG
Subjt: FLLNIQTDVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFG
Query: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
KNNYFLLFIDDFSRKTWVYFVKEKSEVF MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFC ENGIRR MTVPFT QQNGVVERKNRTILNMARS
Subjt: KNNYFLLFIDDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARS
Query: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Subjt: MLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIV
Query: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
SRDVVFDEEASWNWNDEPEDY F+FFPD+RDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLF DSEPLNFEE
Subjt: SRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDSEPLNFEE
Query: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRK IDYDEV APVARLETIRLLIALAAQNN
Subjt: ASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.4e-80 | 32.74 | Show/hide |
Query: LINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKLCLKDPN--WIWHLRFGHLNF
++ L+N + +V + N++S+ +L E G +I + I N + + KN L N+ Q + K N +WH RFGH++
Subjt: LINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKLCLKDPN--WIWHLRFGHLNF
Query: DGLRLLARKNMVKG---LPYVKLPDQLCEDCLHGKQSRKSFPQ-ESSSRAKRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFD
L + RKNM L ++L ++CE CL+GKQ+R F Q + + KRPL +VH+D+CGPI P + NYF++F+D F+ Y +K KS+VF
Subjt: DGLRLLARKNMVKG---LPYVKLPDQLCEDCLHGKQSRKSFPQ-ESSSRAKRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRKTWVYFVKEKSEVFD
Query: MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
MF+ F A E + L D G E+ SNE + FC + GI +TVP T Q NGV ER RTI AR+M+ K+ K FW +AV A YL NR P+R
Subjt: MFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTR
Query: SL--WNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-------------------
+L +KTP + W +KP + HLRVFG Y HI + K+ K DDKS K +FVGY+ + G+KL++ V +K IV+RDVV DE
Subjt: SL--WNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-------------------
Query: EASWNWN-----------------------------DEPEDYNF---------VFFPDDRDEPSDIASPPTSPIT-------------------------
+ S N N E E+ NF FP++ E +I S +
Subjt: EASWNWN-----------------------------DEPEDYNF---------VFFPDDRDEPSDIASPPTSPIT-------------------------
Query: PQQSTSSSSAS-----SSEGPRGMRSLQDIYDETEELSQ----SFNN---------LTLFCLFGDSEPLNFEEASQND---KWKIAMDEEIKAIKKNDTW
P +S S +A + P ++ I +E L S+N L +F D P +F+E D W+ A++ E+ A K N+TW
Subjt: PQQSTSSSSAS-----SSEGPRGMRSLQDIYDETEELSQ----SFNN---------LTLFCLFGDSEPLNFEEASQND---KWKIAMDEEIKAIKKNDTW
Query: ELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
++ P K V +WVF +K NE G RYKARLVA+G++Q+ IDY+E APVAR+ + R +++L Q N
Subjt: ELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAAQNN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-102 | 37.42 | Show/hide |
Query: GDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKLC
G + G+ + + G G I I G + +V +VP+++ N++S L GY + + +IAK + + ++ N + +
Subjt: GDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTDVAQCLKLC
Query: LKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK-LPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRK
+ +WH R GH++ GL++LA+K+++ Y K + C+ CL GKQ R SF Q SS R L+LV++D+CGP++ S G N YF+ FIDD SRK
Subjt: LKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK-LPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDFSRK
Query: TWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQA
WVY +K K +VF +F++F ALVE+E+G +K LRSD GGE+TS EF+ +C+ +GIR TVP T Q NGV ER NRTI+ RSML+ K+PK FW +A
Subjt: TWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPKEFWAQA
Query: VECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWN
V+ A YL NRSP+ L + P++ WT ++ S HL+VFGC A+AH+P ++R+KLDDKS +F+GY GY+L++PV KK I SRDVVF E
Subjt: VECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWN
Query: DEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDE-TEEL----------------------SQSFNNLTLFCLFGD
D E P+ PS +P T +ST+ + E P + + DE EE+ S+ + + + D
Subjt: DEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDE-TEEL----------------------SQSFNNLTLFCLFGD
Query: SEPLNFEEA---SQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLI
EP + +E + ++ AM EE+++++KN T++L LP GK+ + KWVFK+K++ ++ RYKARLV KG+ Q+K ID+DE+ +PV ++ +IR ++
Subjt: SEPLNFEEA---SQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLI
Query: ALAA
+LAA
Subjt: ALAA
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| Q12113 Transposon Ty2-OR1 Gag-Pol polyprotein | 4.8e-26 | 24.06 | Show/hide |
Query: DIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSL----------LIRDNHDKIIAKVQMTKNRMFLLNIQT
+IV IP+ G + N +NG I + PN+ ++LSL +L + +L +++ ++K + + + L I
Subjt: DIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDCSL----------LIRDNHDKIIAKVQMTKNRMFLLNIQT
Query: DVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMV-----KGLPYVKLPDQLCEDCLHGKQSRKSFPQESS---SRAKRPLELVHTDLCGPIKPSSF
K K P + H GH NF ++ +KN V + + C DCL GK ++ + S + P + +HTD+ GP+
Subjt: DVAQCLKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMV-----KGLPYVKLPDQLCEDCLHGKQSRKSFPQESS---SRAKRPLELVHTDLCGPIKPSSF
Query: GKNNYFLLFIDDFSRKTWVYFVKEKSE--VFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNM
+YF+ F D+ +R WVY + ++ E + ++F A ++ + + ++ DRG E+T+ F GI T S+ +GV ER NRT+LN
Subjt: GKNNYFLLFIDDFSRKTWVYFVKEKSE--VFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNM
Query: ARSMLKCKKMPKEFWAQAVECAVYLSNR--SPTRSLWNKTPQQAWTGRKPSIGHLRVFG--CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNP
R++L C +P W AVE + + N SP +K+ +Q I + FG + H PD SK+ + + +S GY +Y P
Subjt: ARSMLKCKKMPKEFWAQAVECAVYLSNR--SPTRSLWNKTPQQAWTGRKPSIGHLRVFG--CMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNP
Query: VTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDS
KKT+ + + V + + DY+ + F DD + + Q T S ++E +S +I ++ L F++ +L L D
Subjt: VTKKTIVSRDVVFDEEASWNWNDEPEDYNFVFFPDDRDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEELSQSFNNLTLFCLFGDS
Query: EPL
EP+
Subjt: EPL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.9e-56 | 27.43 | Show/hide |
Query: GGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLE-KGYNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQC
G D++ D + IP+ G ++ K+ + + N+ YVPN+ N++S+ +L G ++ S ++D + + TK+ ++ I + V+
Subjt: GGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLE-KGYNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQC
Query: LKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGL-PYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDL-CGPIKPSSFGKNNYFLLFID
K + WH R GH L + + L P K C DCL K ++ F Q S+ + RPLE +++D+ PI S Y+++F+D
Subjt: LKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGL-PYVKLPDQLCEDCLHGKQSRKSFPQESSSRAKRPLELVHTDL-CGPIKPSSFGKNNYFLLFID
Query: DFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPKE
F+R TW+Y +K+KS+V + F FK L+E I SD GGEF + + +++GI + P T + NG+ ERK+R I+ ++L +PK
Subjt: DFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPKE
Query: FWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE--
+W A AVYL NR PT L ++P Q G P+ LRVFGC Y + + KLDDKS + VF+GY + Y + T + +SR V FDE
Subjt: FWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE--
Query: ------------------EASWNWNDE---PEDYNFVFFPDDRDEPSDIASPPTSPITP-----------------------------------------
E+S W+ P + P D P A+PP+SP P
Subjt: ------------------EASWNWNDE---PEDYNFVFFPDDRDEPSDIASPPTSPITP-----------------------------------------
Query: ------------------------QQSTSSSSASSSEGPRGMRSLQD----------IYDETEELSQSFNN--------------------------LTL
QS S+ + SSS P S + L+Q NN
Subjt: ------------------------QQSTSSSSASSSEGPRGMRSLQD----------IYDETEELSQSFNN--------------------------LTL
Query: FCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETI
L +SEP +A ++++W+ AM EI A N TW+L P+ VG +W+F K N G + RYKARLVAKGY+QR +DY E +PV + +I
Subjt: FCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETI
Query: RLLIALAAQNN
R+++ +A +
Subjt: RLLIALAAQNN
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.2e-54 | 26.92 | Show/hide |
Query: GGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKG-YNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQC
G D++ D + IP+ G + + + ++ V YVPN+ N++S+ +L ++ S ++D + + TK+ ++ I + V+
Subjt: GGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKG-YNILMKDCSLLIRDNHDKIIAKVQMTKNRMFLLNIQTD--VAQC
Query: LKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQL--CEDCLHGKQSRKSFPQESSSRAKRPLELVHTDL-CGPIKPSSFGKNNYFLLFI
C K + WH R GH L +L LP + +L C DC K + F S+ + +PLE +++D+ PI S Y+++F+
Subjt: LKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQL--CEDCLHGKQSRKSFPQESSSRAKRPLELVHTDL-CGPIKPSSFGKNNYFLLFI
Query: DDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPK
D F+R TW+Y +K+KS+V D F FK+LVE I L SD GGEF + + +++GI + P T + NG+ ERK+R I+ M ++L +PK
Subjt: DDFSRKTWVYFVKEKSEVFDMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCAENGIRRPMTVPFTSQQNGVVERKNRTILNMARSMLKCKKMPK
Query: EFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-
+W A AVYL NR PT L ++P Q G+ P+ L+VFGC Y + R KL+DKS++ F+GY + Y + T + SR V FDE
Subjt: EFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDE-
Query: -------------------EASWNW-------------------------------------------------------NDEP----------------
+++ NW + EP
Subjt: -------------------EASWNW-------------------------------------------------------NDEP----------------
Query: -----EDYNFVFFPD---------DRDEP---SDIASP----PTSPITPQQSTSSSSAS----------------SSEGPRGMRSLQD-IYDETEELSQS
+ + P+ +++ P S I+SP P++ I+ S SSSS S +++ P S+ D + +Q
Subjt: -----EDYNFVFFPD---------DRDEP---SDIASP----PTSPITPQQSTSSSSAS----------------SSEGPRGMRSLQD-IYDETEELSQS
Query: FNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPV
++ T L +SEP +A ++D+W+ AM EI A N TW+L P VG +W+F K N G + RYKARLVAKGY+QR +DY E +PV
Subjt: FNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWEL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPV
Query: ARLETIRLLIALAAQNN
+ +IR+++ +A +
Subjt: ARLETIRLLIALAAQNN
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G21000.1 Gag-Pol-related retrotransposon family protein | 8.7e-07 | 37.88 | Show/hide |
Query: FIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNI
F LD + + D T + V+GKG + I +K GK + I NV +VP + N+LS G+++ K Y+I
Subjt: FIELDESVGGDIVFGDATKIPVKGKGKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNI
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.6e-24 | 45.24 | Show/hide |
Query: YDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDI
Y++ L SF L C+ EP + EA + W AMD+EI A++ TWE+ TLP KK +G KWV+KIK N G +ERYKARLVAKGY+Q++ I
Subjt: YDETEELSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDI
Query: DYDEVVAPVARLETIRLLIALAAQNN
D+ E +PV +L +++L++A++A N
Subjt: DYDEVVAPVARLETIRLLIALAAQNN
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 9.3e-09 | 29.46 | Show/hide |
Query: LMKDCSLLIRDN-HDKIIAKVQMTKNRMFLLNIQTDVAQC-LKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSF
++K C +++ N HD +++L + + L KD +WH R H++ G+ LL +K + L + CEDC++GK R +F
Subjt: LMKDCSLLIRDN-HDKIIAKVQMTKNRMFLLNIQTDVAQC-LKLCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVKLPDQLCEDCLHGKQSRKSF
Query: PQESSSRAKRPLELVHTDLCG-PIKPSSF
K PL+ VH+DL G P P SF
Subjt: PQESSSRAKRPLELVHTDLCG-PIKPSSF
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 5.4e-09 | 36.47 | Show/hide |
Query: NRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEK
NRTI+ RSML +PK F A A AV++ N+ P+ ++ P + W P+ +LR FGC+AY H + K K E+
Subjt: NRTILNMARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDDKSEK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 5.6e-14 | 41.58 | Show/hide |
Query: EPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAA
EP + A ++ W AM EE+ A+ +N TW L P + +G KWVFK K + G ++R KARLVAKG+ Q + I + E +PV R TIR ++ +A
Subjt: EPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVVAPVARLETIRLLIALAA
Query: Q
Q
Subjt: Q
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