| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-123 | 93.39 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-122 | 92.56 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDP+ENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYT+KEGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-123 | 93.39 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 2.0e-122 | 92.98 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP FIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-123 | 93.39 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 1.6e-122 | 92.56 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDP+ENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYT+KEGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| A0A5A7TZD0 Gag/pol protein | 1.1e-123 | 93.39 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| A0A5A7UYE8 Gag/pol protein | 1.1e-123 | 93.39 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| A0A5D3BUN8 Gag/pol protein | 9.5e-123 | 92.98 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP FIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| A0A5D3CYF4 Gag/pol protein | 1.1e-123 | 93.39 | Show/hide |
Query: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
RGGLFFDPQENRVFVSTNATFLEED MR+HKPR KLVL+EATDESTRVVDEVGPSSRVDET TSGQSHPSQSLRMPRRSGRVVSQPN YL L ETQVVIP
Subjt: RGGLFFDPQENRVFVSTNATFLEEDLMRDHKPRGKLVLNEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMPRRSGRVVSQPNCYLDLIETQVVIP
Query: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
D+GVED LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVW+LVDLPEGVKPIGCKW YKRKRDS GKVQTFKARLVAKGYTQ+EGVDYEETFS VAMLKSI
Subjt: DNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSI
Query: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQP GFIT
Subjt: RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPAGFIT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-23 | 42.62 | Show/hide |
Query: DKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQM
DK W +A++ E+ + N+ W + PE + +W + K + G +KARLVA+G+TQK +DYEETF+ VA + S R +LS+ Y+ ++ QM
Subjt: DKDQWVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQM
Query: DVKTAFLNGNLEESIFMSQPAG
DVKTAFLNG L+E I+M P G
Subjt: DVKTAFLNGNLEESIFMSQPAG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.8e-33 | 39.51 | Show/hide |
Query: NEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMP---RRSGRVVSQPNCYLDLIETQVVIPDNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYF
+E +++ + + + ++DE + + HP+Q RRS R + Y V+I D+ ++L K+ ++ +K+Q +KAM EMES+
Subjt: NEATDESTRVVDEVGPSSRVDETITSGQSHPSQSLRMP---RRSGRVVSQPNCYLDLIETQVVIPDNGVEDTLSYKQAMNDVDKDQWVKAMDLEMESMYF
Query: NSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMS
N +KLV+LP+G +P+ CKW +K K+D K+ +KARLV KG+ QK+G+D++E FS V + SIR +LS+A D E+ Q+DVKTAFL+G+LEE I+M
Subjt: NSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMS
Query: QPAGF
QP GF
Subjt: QPAGF
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 5.9e-13 | 41.86 | Show/hide |
Query: WVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIA
W +AM E++++ N W LV P +GCKW +K K S G + KARLVAKG+ Q+EG+ + ET+S V +IR +L++A
Subjt: WVKAMDLEMESMYFNSVWKLVDLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.7e-24 | 43.18 | Show/hide |
Query: KQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEG-VKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATF
+ A+ + ++W AM E+ + N W LV P V +GC+W + +K +S G + +KARLVAKGY Q+ G+DY ETFS V SIRI+L +A
Subjt: KQAMNDVDKDQWVKAMDLEMESMYFNSVWKLVDLPEG-VKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATF
Query: YDYEIWQMDVKTAFLNGNLEESIFMSQPAGFI
+ I Q+DV AFL G L + ++MSQP GFI
Subjt: YDYEIWQMDVKTAFLNGNLEESIFMSQPAGFI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-24 | 45.8 | Show/hide |
Query: QAMNDVDKDQWVKAMDLEMESMYFNSVWKLV-DLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATFY
QAM D D+W +AM E+ + N W LV P V +GC+W + +K +S G + +KARLVAKGY Q+ G+DY ETFS V SIRI+L +A
Subjt: QAMNDVDKDQWVKAMDLEMESMYFNSVWKLV-DLPEGVKPIGCKWNYKRKRDSTGKVQTFKARLVAKGYTQKEGVDYEETFSHVAMLKSIRILLSIATFY
Query: DYEIWQMDVKTAFLNGNLEESIFMSQPAGFI
+ I Q+DV AFL G L + ++MSQP GF+
Subjt: DYEIWQMDVKTAFLNGNLEESIFMSQPAGFI
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