; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0243701 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0243701
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr09:6346531..6347657
RNA-Seq ExpressionCmc09g0243701
SyntenyCmc09g0243701
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048191.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-14180.66Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQ----
        MD+RCFTILCTMLRTRGGLEATQYV+VEE+  IFL        NRVARRHF RS  T+SRHFN VLN +LR+HEILLKQPD   HSCSHEKWRWFQ    
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQ----

Query:  -----NCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPY
               + ALDGTHIKVNVSMSD PRYRSRK DITTNVLG+CSQNGEFIFVMPGWE S SDSRVL+D VS+P GLK PKGYYYLCD  YLN EGFLAPY
Subjt:  -----NCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPY

Query:  RGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIEN
        RGQ YHL EWRGGNPPK PKELFNMRHS ARNVIERAFGSLK RWAILRGRSYYPVDIQCKIITACCLLH LIHREM SEATFEEPHLGEDDSSEMNIEN
Subjt:  RGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIEN

Query:  VNSVE
        +N VE
Subjt:  VNSVE

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-14283.45Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        MDRRCFTILCTMLRT+GGLEATQYV+VEE++ IFL        NRV RRHF RSGET+SRHFNAV    LRLHEILLKQPD   +SCSHEKWRWFQ CLG
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE
        ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVC QNGEFIFVMPGWE S SDSRVL+DAVS+ +GLK PKGYYYLCD GY NAEGFLAPYRGQ YHLTE
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE

Query:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE
        WRGGNPPK PKELFNMRHS+ARNVIERAFGSL  RW IL+GRSYY VDIQCKIITACCLLH LIHREM SEATF+EPHLGE DSSEMNIEN+N VE
Subjt:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE

TYK05758.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-155100Show/hide
Query:  MSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVL
        MSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVL
Subjt:  MSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVL

Query:  KDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITAC
        KDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITAC
Subjt:  KDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITAC

Query:  CLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVERLMSGLNGGIILQTKCLRIGIMYD
        CLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVERLMSGLNGGIILQTKCLRIGIMYD
Subjt:  CLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVERLMSGLNGGIILQTKCLRIGIMYD

TYK08067.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-13480.07Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        MD+RCFTILCTMLRTRGGLEATQYV+VEE+  IFL        NRVARRHF RS  T+SRHFN VLN +LR+HEILLKQPD   HSC             
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE
        ALDGTHIKVNVSMSD PRYRSRK DITTNVLG+CSQNGEFIFVMPGWE S SDSRVL+D VS+P GLK PKGYYYLCD  YLN EGFLAPYRGQ YHL E
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE

Query:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE
        WRGGNPPK PKELFNMRHS ARNVIERAFGSLK RWAILRGRSYYPVDIQCKIITACCLLH LIHREM SEATFEEPHLGEDDSSEMNIEN+N VE
Subjt:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE

XP_008455792.1 PREDICTED: putative nuclease HARBI1 [Cucumis melo]7.8e-10263.41Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        MDRRCF ILC +LRT  GL  T+ ++VEE+V +FL        NR+ +R FVRSGET+SRHFN VL    RLH+ LLK+P    +SC+  +W+WF+NCLG
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE
        ALDGT+IKVNVS +DRPRYR+RKG++ TNVLG C   G+F+FV+ GWE S +DSR+L+DA+S+ +GLK PKGYYYLCD GY NAEGFLAPYRG+ YHL+E
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE

Query:  WRG-GNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFE
        WRG  N P   +E FNM+HS ARNVIERAFG LK RWAILRG+SYYPVD+QC+ I ACCLLH LI+REM +    E
Subjt:  WRG-GNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFE

TrEMBL top hitse value%identityAlignment
A0A1S3C1U8 putative nuclease HARBI13.8e-10263.41Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        MDRRCF ILC +LRT  GL  T+ ++VEE+V +FL        NR+ +R FVRSGET+SRHFN VL    RLH+ LLK+P    +SC+  +W+WF+NCLG
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE
        ALDGT+IKVNVS +DRPRYR+RKG++ TNVLG C   G+F+FV+ GWE S +DSR+L+DA+S+ +GLK PKGYYYLCD GY NAEGFLAPYRG+ YHL+E
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE

Query:  WRG-GNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFE
        WRG  N P   +E FNM+HS ARNVIERAFG LK RWAILRG+SYYPVD+QC+ I ACCLLH LI+REM +    E
Subjt:  WRG-GNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFE

A0A5A7U3R2 Retrotransposon protein1.9e-14180.66Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQ----
        MD+RCFTILCTMLRTRGGLEATQYV+VEE+  IFL        NRVARRHF RS  T+SRHFN VLN +LR+HEILLKQPD   HSCSHEKWRWFQ    
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQ----

Query:  -----NCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPY
               + ALDGTHIKVNVSMSD PRYRSRK DITTNVLG+CSQNGEFIFVMPGWE S SDSRVL+D VS+P GLK PKGYYYLCD  YLN EGFLAPY
Subjt:  -----NCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPY

Query:  RGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIEN
        RGQ YHL EWRGGNPPK PKELFNMRHS ARNVIERAFGSLK RWAILRGRSYYPVDIQCKIITACCLLH LIHREM SEATFEEPHLGEDDSSEMNIEN
Subjt:  RGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIEN

Query:  VNSVE
        +N VE
Subjt:  VNSVE

A0A5A7VG45 Retrotransposon protein3.7e-14283.45Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        MDRRCFTILCTMLRT+GGLEATQYV+VEE++ IFL        NRV RRHF RSGET+SRHFNAV    LRLHEILLKQPD   +SCSHEKWRWFQ CLG
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE
        ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVC QNGEFIFVMPGWE S SDSRVL+DAVS+ +GLK PKGYYYLCD GY NAEGFLAPYRGQ YHLTE
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE

Query:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE
        WRGGNPPK PKELFNMRHS+ARNVIERAFGSL  RW IL+GRSYY VDIQCKIITACCLLH LIHREM SEATF+EPHLGE DSSEMNIEN+N VE
Subjt:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE

A0A5D3C3H1 Putative nuclease HARBI15.9e-156100Show/hide
Query:  MSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVL
        MSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVL
Subjt:  MSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVL

Query:  KDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITAC
        KDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITAC
Subjt:  KDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITAC

Query:  CLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVERLMSGLNGGIILQTKCLRIGIMYD
        CLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVERLMSGLNGGIILQTKCLRIGIMYD
Subjt:  CLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVERLMSGLNGGIILQTKCLRIGIMYD

A0A5D3C7X6 Retrotransposon protein3.7e-13480.07Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        MD+RCFTILCTMLRTRGGLEATQYV+VEE+  IFL        NRVARRHF RS  T+SRHFN VLN +LR+HEILLKQPD   HSC             
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE
        ALDGTHIKVNVSMSD PRYRSRK DITTNVLG+CSQNGEFIFVMPGWE S SDSRVL+D VS+P GLK PKGYYYLCD  YLN EGFLAPYRGQ YHL E
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE

Query:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE
        WRGGNPPK PKELFNMRHS ARNVIERAFGSLK RWAILRGRSYYPVDIQCKIITACCLLH LIHREM SEATFEEPHLGEDDSSEMNIEN+N VE
Subjt:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVE

SwissProt top hitse value%identityAlignment
Q9M2U3 Protein ALP1-like3.7e-1428.29Show/hide
Query:  EKWRWFQNCLGALDGTHIKVNVSMSDRPR--YRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDA--------VSQPSGLKAPKG------Y
        EK     NC GA+D THI +N+   +     +   + + +  +  V   +  F+ V+ GW  S +D  VLK++          + +G K P         
Subjt:  EKWRWFQNCLGALDGTHIKVNVSMSDRPR--YRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDA--------VSQPSGLKAPKG------Y

Query:  YYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQC-KIITACCLLHTLIHREMDSEA
        Y + D+G+      L PY+G+           P   P+  FN RHS A    + A   LKDRW I+ G  + P   +  +II  CCLLH +I  +M+ + 
Subjt:  YYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQC-KIITACCLLHTLIHREMDSEA

Query:  TFEEP
          ++P
Subjt:  TFEEP

Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein3.6e-2833.06Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL-----NRVAR---RHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEK-------WR
        M   CFT LC ML+T   L+ T  +++EE V +FL     N V R     F R+ ET+ R F  VL     L    ++ P         E+       W 
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL-----NRVAR---RHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEK-------WR

Query:  WFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKG-YYYLCDTGYLNAEGFLAPYR
        +F   +GA+DGTH+ V V    +  Y +R  + + N++ +C     F ++  G   S  D+ VL+ A    S    P    YYL D+GY N +G LAPYR
Subjt:  WFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKG-YYYLCDTGYLNAEGFLAPYR

Query:  GQ-----HYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDR
                YH++++  G  P+   ELFN  H+  R+VIER F   K++
Subjt:  GQ-----HYHLTEWRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDR

AT5G28730.1 unknown protein2.5e-1331.12Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        M    FT LC +L  + GL+++  ++++E V IFL         R     F  + ET+ R F+ VL  + RL    ++           E+ R   N L 
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVS-QPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQH
          D T           P      G  + NVL +C  +  F +   G   ST D+RVL  A+S  P     P   YYL D+GY N  G+LAPYR +H
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVS-QPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQH

AT5G28950.1 unknown protein1.2e-1547.22Show/hide
Query:  WFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPS
        +F++C+GA+D THI   VS    P +R+RKGDI+ N+L  C+ + EF++V+ GWE S  DS+VL DA+++ S
Subjt:  WFQNCLGALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPS

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)4.8e-2540.37Show/hide
Query:  FIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRG-GNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAI
        FI+V+ GWE S  DSRVL DA+ +          +YL D G+ N   FLAP+RG  YHL E+ G    P+ P ELFN+RH   RNVIER FG  K R+AI
Subjt:  FIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRG-GNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAI

Query:  LRGRSYYPVDIQCKIITACCLLHTLIHREMDS-EATFEEPHLGEDD--SSEMNIENVNSVE
         +    +    Q  ++  C  LH  + +E  S EA F +    E D  ++E N  N N ++
Subjt:  LRGRSYYPVDIQCKIITACCLLHTLIHREMDS-EATFEEPHLGEDD--SSEMNIENVNSVE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.5e-4535.55Show/hide
Query:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG
        MD+  F  LC +L+TRG L  T  + +E  + IFL         R  +  F  SGET+SRHFN VLN ++ + +    QP+S + +  ++   +F++C+G
Subjt:  MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFL--------NRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLG

Query:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE
         +D  HI V V + ++  +R+  G +T NVL   S +  F +V+ GWE S SD +VL  A+++ + L+ P+G YY+ D  Y N  GF+APY G       
Subjt:  ALDGTHIKVNVSMSDRPRYRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTE

Query:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEAT---FEEPHL---GEDDSSEMNIENVNS
            N  +  KE+FN RH      I R FG+LK+R+ IL     YP+  Q K++ A C LH  +  E   +     FEE  L   GED    +  E V  
Subjt:  WRGGNPPKWPKELFNMRHSYARNVIERAFGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEAT---FEEPHL---GEDDSSEMNIENVNS

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAAGATGTTTTACTATCTTGTGTACTATGTTAAGAACAAGAGGGGGATTGGAAGCCACTCAATATGTGAATGTTGAAGAGATTGTTACGATTTTTTTGAATAG
GGTAGCTCGACGACATTTTGTACGGTCTGGTGAAACAATGTCAAGACACTTCAATGCTGTTCTTAACACAATTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATT
CAGCGGCCCATTCATGTTCGCACGAGAAGTGGCGATGGTTTCAAAATTGTCTAGGTGCATTAGATGGTACACACATCAAAGTGAATGTAAGTATGAGTGATCGTCCTAGG
TATAGATCTAGAAAGGGTGACATTACCACAAATGTACTTGGTGTGTGTTCGCAAAATGGTGAGTTCATATTTGTCATGCCTGGATGGGAAGAGTCTACATCTGATTCGAG
AGTACTTAAAGATGCAGTGTCACAACCTAGTGGTCTAAAAGCTCCAAAGGGTTACTACTACTTGTGTGATACTGGTTATCTAAATGCTGAAGGATTCCTCGCTCCATACC
GAGGTCAACATTACCATCTAACTGAATGGCGTGGAGGAAACCCACCAAAATGGCCGAAAGAGCTATTTAACATGAGGCATTCCTATGCTAGAAACGTTATTGAAAGAGCA
TTTGGATCATTGAAGGATCGGTGGGCCATTCTACGAGGGAGATCCTATTACCCCGTTGACATACAATGTAAAATAATAACAGCATGTTGCCTCTTACATACCTTGATACA
TAGAGAAATGGATTCAGAGGCAACATTTGAGGAGCCACATCTTGGTGAAGATGATTCAAGCGAGATGAACATTGAGAATGTGAACTCTGTGGAACGACTAATGTCTGGAC
TGAATGGAGGGATAATCTTGCAAACAAAATGTTTGAGGATTGGAATAATGTATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGAAGATGTTTTACTATCTTGTGTACTATGTTAAGAACAAGAGGGGGATTGGAAGCCACTCAATATGTGAATGTTGAAGAGATTGTTACGATTTTTTTGAATAG
GGTAGCTCGACGACATTTTGTACGGTCTGGTGAAACAATGTCAAGACACTTCAATGCTGTTCTTAACACAATTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATT
CAGCGGCCCATTCATGTTCGCACGAGAAGTGGCGATGGTTTCAAAATTGTCTAGGTGCATTAGATGGTACACACATCAAAGTGAATGTAAGTATGAGTGATCGTCCTAGG
TATAGATCTAGAAAGGGTGACATTACCACAAATGTACTTGGTGTGTGTTCGCAAAATGGTGAGTTCATATTTGTCATGCCTGGATGGGAAGAGTCTACATCTGATTCGAG
AGTACTTAAAGATGCAGTGTCACAACCTAGTGGTCTAAAAGCTCCAAAGGGTTACTACTACTTGTGTGATACTGGTTATCTAAATGCTGAAGGATTCCTCGCTCCATACC
GAGGTCAACATTACCATCTAACTGAATGGCGTGGAGGAAACCCACCAAAATGGCCGAAAGAGCTATTTAACATGAGGCATTCCTATGCTAGAAACGTTATTGAAAGAGCA
TTTGGATCATTGAAGGATCGGTGGGCCATTCTACGAGGGAGATCCTATTACCCCGTTGACATACAATGTAAAATAATAACAGCATGTTGCCTCTTACATACCTTGATACA
TAGAGAAATGGATTCAGAGGCAACATTTGAGGAGCCACATCTTGGTGAAGATGATTCAAGCGAGATGAACATTGAGAATGTGAACTCTGTGGAACGACTAATGTCTGGAC
TGAATGGAGGGATAATCTTGCAAACAAAATGTTTGAGGATTGGAATAATGTATGACTAA
Protein sequenceShow/hide protein sequence
MDRRCFTILCTMLRTRGGLEATQYVNVEEIVTIFLNRVARRHFVRSGETMSRHFNAVLNTILRLHEILLKQPDSAAHSCSHEKWRWFQNCLGALDGTHIKVNVSMSDRPR
YRSRKGDITTNVLGVCSQNGEFIFVMPGWEESTSDSRVLKDAVSQPSGLKAPKGYYYLCDTGYLNAEGFLAPYRGQHYHLTEWRGGNPPKWPKELFNMRHSYARNVIERA
FGSLKDRWAILRGRSYYPVDIQCKIITACCLLHTLIHREMDSEATFEEPHLGEDDSSEMNIENVNSVERLMSGLNGGIILQTKCLRIGIMYD