CuGenDBv2

Gene ID	Cmc09g0243711
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	60S ribosomal protein L35
Genome location	CMiso1.1chr09:6349426..6351068
RNA-Seq Expression	Cmc09g0243711
Synteny	Cmc09g0243711
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001854 - Ribosomal protein L29/L35 IPR036049 - Ribosomal protein L29/L35 superfamily IPR045059 - 60S ribosomal protein L35

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004149815.1 60S ribosomal protein L35 [Cucumis sativus]

1.1e-20

100

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

XP_008463526.1 PREDICTED: 60S ribosomal protein L35 [Cucumis melo]

1.1e-20

100

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

XP_022992073.1 60S ribosomal protein L35-like [Cucurbita maxima]

1.9e-20

98.39

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLL+QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

XP_023525260.1 60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo]

4.3e-20

98.39

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

XP_038889679.1 60S ribosomal protein L35 [Benincasa hispida]

2.5e-20

98.39

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSK+DLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQT2 Uncharacterized protein

5.5e-21

100

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

A0A1S3CJH2 60S ribosomal protein L35

5.5e-21

100

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

A0A6J1FH81 60S ribosomal protein L35

2.1e-20

98.39

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

A0A6J1JVN4 60S ribosomal protein L35

2.1e-20

98.39

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

A0A6J1JY13 60S ribosomal protein L35-like

9.4e-21

98.39

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQKSKADLL+QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

SwissProt top hits

e value

%identity

Alignment

O80626 60S ribosomal protein L35-2

1.3e-19

88.71

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Q9LZ41 60S ribosomal protein L35-4

5.0e-19

87.1

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Q9M3D2 60S ribosomal protein L35-3

1.9e-18

85.48

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV S
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Q9M5L0 60S ribosomal protein L35

1.4e-21

93.55

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Q9SF53 60S ribosomal protein L35-1

3.8e-19

87.1

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV S
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39390.1 Ribosomal L29 family protein

9.3e-21

88.71

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

AT3G09500.1 Ribosomal L29 family protein

2.7e-20

87.1

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV S
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

AT3G55170.1 Ribosomal L29 family protein

1.3e-19

85.48

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV S
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

AT3G55170.2 Ribosomal L29 family protein

1.3e-19

85.48

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV S
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

AT5G02610.1 Ribosomal L29 family protein

3.5e-20

87.1

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVIS
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Sequences

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CDS sequence

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ATGGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGTTGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTAC
CGGCGGTGCTCCGAACAAGCTATCCAAAATCAAGGTGGTGAGATTGTCGATTGCTCAAGTATTGACAGTAATATCTTAG

mRNA sequence

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CCTTCTTCTCGGACGCGAAAACCCTAGTTTTCTCAGTAGCACCTCTTCCACCACCTTCCATCTCTTCTAGGGTTTCGCCGACTCCAAGACCGCACGATTAGAAATGGCGA
GGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGTTGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGT
GCTCCGAACAAGCTATCCAAAATCAAGGTGGTGAGATTGTCGATTGCTCAAGTATTGACAGTAATATCTTAGAAGAAAAAGGCGGTGTTGAGGGAAGCTTACAATAAGAA
GAAGCTTCTGCCGCTTGATCTGCGCCCAAAGAAGACCAGGGCCACTCGTAGAAGGCTCAGAAAGCACCAGGCGTCTTTGAAAACTGAGAGACAGAAGAAGAAAGAATTGT
ACTTTCCGTTGAGGAAATATGCTATTAAGGTGTAGTGGTAAGTATTATATTGGGTAGTCCATTTTTATATGCAACGGCAAACCAATTTTGTTGGCAAGTTTTGTCTCGTA
ATCTTATGTCGGATACTCTTGAGGTATTTCTCCCCAAACCAAGGTGTTTCATTTTCATTGACAATTATATATTTTTGACAGTTGATAGCCTTTTTTCTTGTTTATTGACT
TGATCTTTTTCTGTCCAAAAAACACTTGTTCTTTTTGTACATTTTGTTTGCTAGC

Protein sequence

Show/hide protein sequence

MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Cmc09g0243711 (gene) of Melon (Charmono) v1.1 genome