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Cmc09g0243921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0243921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr09:6497101..6497490
RNA-Seq ExpressionCmc09g0243921
SyntenyCmc09g0243921
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037383.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-5183.72Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        MIS  S T P+S SLDLYTTAPPF DPSLY+KLVGSLQYLTFTRPDI FS+NRVSQFM KSTVIHFL VKRILR LCGT TLGINFRK  F LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDR  T GFIAFLGSN ISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.0e-5183.72Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        M SAKS  TPMS SLDLYT APPF DP LY +LVGSLQYLTFTRPDIA S+NRVSQFM K TVIHF  VKRILR LCGT TLGI FRK SF LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WA DTSDRRSTSGFIAFLGSNPISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

XP_016901810.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]6.4e-5081.4Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        M S KS  TPMS S DLYT APPF DPSLY +LVGSLQYLTFTRPDIAFS+NRVSQFM K T+IHF  VKRILR L GTLT GI FRK SF LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDRRSTS FIAFL SNPISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

XP_016902755.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]8.4e-5082.17Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        M SAKS  TPMS SLDLYT APPF DPSLY +LVGSLQYLTFTRPDIAFS+NRVSQFM K TVIHF  VKRILR L GT TLGI FR+ SF LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDRRSTS FI FLG NPISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

XP_016902988.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.5e-5183.72Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        MIS  S T P+S SLDLYTTAPPF DPSLY+KLVGSLQYLTFTRPDI FS+NRVSQFM KSTVIHFL VKRILR LCGT TLGINFRK  F LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDR  T GFIAFLGSN ISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

TrEMBL top hitse value%identityAlignment
A0A1S4E1E5 uncharacterized mitochondrial protein AtMg00810-like3.1e-5081.4Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        M S KS  TPMS S DLYT APPF DPSLY +LVGSLQYLTFTRPDIAFS+NRVSQFM K T+IHF  VKRILR L GTLT GI FRK SF LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDRRSTS FIAFL SNPISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

A0A1S4E432 uncharacterized mitochondrial protein AtMg00810-like7.4e-5283.72Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        MIS  S T P+S SLDLYTTAPPF DPSLY+KLVGSLQYLTFTRPDI FS+NRVSQFM KSTVIHFL VKRILR LCGT TLGINFRK  F LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDR  T GFIAFLGSN ISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

A0A5A7TPR4 Putative mitochondrial protein9.6e-5283.72Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        M SAKS  TPMS SLDLYT APPF DP LY +LVGSLQYLTFTRPDIA S+NRVSQFM K TVIHF  VKRILR LCGT TLGI FRK SF LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WA DTSDRRSTSGFIAFLGSNPISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

A0A5D3BH82 Putative mitochondrial protein7.4e-5283.72Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        MIS  S T P+S SLDLYTTAPPF DPSLY+KLVGSLQYLTFTRPDI FS+NRVSQFM KSTVIHFL VKRILR LCGT TLGINFRK  F LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDR  T GFIAFLGSN ISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

A0A5D3C550 Putative mitochondrial protein4.0e-5082.17Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD
        M SAKS  TPMS SLDLYT APPF DPSLY +LVGSLQYLTFTRPDIAFS+NRVSQFM K TVIHF  VKRILR L GT TLGI FR+ SF LQTFCDSD
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK
        WAGDTSDRRSTS FI FLG NPISWSSKK
Subjt:  WAGDTSDRRSTSGFIAFLGSNPISWSSKK

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1615.9e-1442.16Show/hide
Query:  YHKLVGSLQYL-TFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINF-RKNSFPLQTFCDSDWAGDTSDRRSTSGFIAFLGSNPISWSS
        Y   VG++ YL   TRPD+A ++  +SQF       H+  +KR+LR L  T T G+ F R  +  L  + D+DWAGD   RRSTSG++  L    +SW S
Subjt:  YHKLVGSLQYL-TFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINF-RKNSFPLQTFCDSDWAGDTSDRRSTSGFIAFLGSNPISWSS

Query:  KK
        KK
Subjt:  KK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.7e-1034.56Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPF-------IDPSLYHKLVGSLQY-LTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFP
        M +AK  +TP++  L L     P        +    Y   VGSL Y +  TRPDIA ++  VS+F++     H+  VK ILR L GT    + F  +   
Subjt:  MISAKSFTTPMSHSLDLYTTAPPF-------IDPSLYHKLVGSLQY-LTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFP

Query:  LQTFCDSDWAGDTSDRRSTSGFIAFLGSNPISWSSK
        L+ + D+D AGD  +R+S++G++       ISW SK
Subjt:  LQTFCDSDWAGDTSDRRSTSGFIAFLGSNPISWSSK

P92519 Uncharacterized mitochondrial protein AtMg008106.1e-2747.69Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCDS
        M+  K  +TP+   L+   +   + DPS +  +VG+LQYLT TRPDI++++N V Q M + T+  F ++KR+LR + GT+  G+   KNS   +Q FCDS
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCDS

Query:  DWAGDTSDRRSTSGFIAFLGSNPISWSSKK
        DWAG TS RRST+GF  FLG N ISWS+K+
Subjt:  DWAGDTSDRRSTSGFIAFLGSNPISWSSKK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.1e-2853.03Show/hide
Query:  MISAKSFTTPMSHS--LDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRK-NSFPLQTFC
        MI+AK  TTPM+ S  L LY +     DP+ Y  +VGSLQYL FTRPDI++++NR+SQFM   T  H   +KRILR L GT   GI  +K N+  L  + 
Subjt:  MISAKSFTTPMSHS--LDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRK-NSFPLQTFC

Query:  DSDWAGDTSDRRSTSGFIAFLGSNPISWSSKK
        D+DWAGD  D  ST+G+I +LG +PISWSSKK
Subjt:  DSDWAGDTSDRRSTSGFIAFLGSNPISWSSKK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.0e-2648.85Show/hide
Query:  MISAKSFTTPMSHSLDL-YTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRK-NSFPLQTFCD
        M++AK   TPM+ S  L   +     DP+ Y  +VGSLQYL FTRPD+++++NR+SQ+M   T  H+  +KR+LR L GT   GI  +K N+  L  + D
Subjt:  MISAKSFTTPMSHSLDL-YTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRK-NSFPLQTFCD

Query:  SDWAGDTSDRRSTSGFIAFLGSNPISWSSKK
        +DWAGDT D  ST+G+I +LG +PISWSSKK
Subjt:  SDWAGDTSDRRSTSGFIAFLGSNPISWSSKK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-1635.11Show/hide
Query:  MISAKSFTTPMSHSLDLYT-TAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCD
        ++  K  + PM  S+     +   F+D   Y +L+G L YL  TR DI+F++N++SQF +   + H   V +IL  + GT+  G+ +   +   LQ F D
Subjt:  MISAKSFTTPMSHSLDLYT-TAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCD

Query:  SDWAGDTSDRRSTSGFIAFLGSNPISWSSKK
        + +      RRST+G+  FLG++ ISW SKK
Subjt:  SDWAGDTSDRRSTSGFIAFLGSNPISWSSKK

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.8e-1039.51Show/hide
Query:  YLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCDSDWAGDTSDRRSTSGFIAFL
        YLT TRPD+ F++NR+SQF   S       V ++L  + GT+  G+ +   S   L+ F DSDWA     RRS +GF + +
Subjt:  YLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCDSDWAGDTSDRRSTSGFIAFL

ATMG00810.1 DNA/RNA polymerases superfamily protein4.3e-2847.69Show/hide
Query:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCDS
        M+  K  +TP+   L+   +   + DPS +  +VG+LQYLT TRPDI++++N V Q M + T+  F ++KR+LR + GT+  G+   KNS   +Q FCDS
Subjt:  MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNS-FPLQTFCDS

Query:  DWAGDTSDRRSTSGFIAFLGSNPISWSSKK
        DWAG TS RRST+GF  FLG N ISWS+K+
Subjt:  DWAGDTSDRRSTSGFIAFLGSNPISWSSKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCTGCAAAATCCTTTACCACACCAATGTCTCATTCTCTTGACCTCTACACCACTGCACCACCTTTTATTGATCCATCTTTATACCACAAACTAGTTGGTTCCTT
ACAATATCTTACATTTACTCGTCCTGATATTGCCTTCTCCATAAATCGTGTCAGCCAATTCATGGACAAATCGACTGTCATTCACTTCTTGATAGTCAAACGCATCCTCC
GGTGTTTATGTGGTACGCTAACTCTTGGAATAAATTTTCGCAAAAATTCGTTTCCTCTTCAAACCTTTTGTGACTCTGATTGGGCAGGTGATACTTCTGACAGACGCTCT
ACCTCCGGATTCATTGCCTTCCTTGGCTCTAATCCAATCTCCTGGTCTTCTAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCTGCAAAATCCTTTACCACACCAATGTCTCATTCTCTTGACCTCTACACCACTGCACCACCTTTTATTGATCCATCTTTATACCACAAACTAGTTGGTTCCTT
ACAATATCTTACATTTACTCGTCCTGATATTGCCTTCTCCATAAATCGTGTCAGCCAATTCATGGACAAATCGACTGTCATTCACTTCTTGATAGTCAAACGCATCCTCC
GGTGTTTATGTGGTACGCTAACTCTTGGAATAAATTTTCGCAAAAATTCGTTTCCTCTTCAAACCTTTTGTGACTCTGATTGGGCAGGTGATACTTCTGACAGACGCTCT
ACCTCCGGATTCATTGCCTTCCTTGGCTCTAATCCAATCTCCTGGTCTTCTAAAAAGTAA
Protein sequenceShow/hide protein sequence
MISAKSFTTPMSHSLDLYTTAPPFIDPSLYHKLVGSLQYLTFTRPDIAFSINRVSQFMDKSTVIHFLIVKRILRCLCGTLTLGINFRKNSFPLQTFCDSDWAGDTSDRRS
TSGFIAFLGSNPISWSSKK