CuGenDBv2

Gene ID	Cmc09g0244081
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribonuclease H
Genome location	CMiso1.1chr09:6757529..6759679
RNA-Seq Expression	Cmc09g0244081
Synteny	Cmc09g0244081
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0030430 - host cell cytoplasm (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]

0.0e+00

92.4

Show/hide

Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS+ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG
        ISLCQKWIVPSIESQYEEADVI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLYRRSYEGLLL+ LGKEESTKAL+EAHSG
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG

TYK02262.1 uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]

0.0e+00

92.4

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Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS+ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG
        ISLCQKWIVPSIESQYEEADVI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLYRRSYEGLLL+ LGKEESTKAL+EAHSG
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG

TYK05704.1 uncharacterized protein E5676_scaffold98G001850 [Cucumis melo var. makuwa]

0.0e+00

100

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Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKHDLVVKSKKKCDHLKDLKLVLDRLRKYQLRM
        ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKHDLVVKSKKKCDHLKDLKLVLDRLRKYQLRM
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKHDLVVKSKKKCDHLKDLKLVLDRLRKYQLRM

Query:  NPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNP
        NPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNP
Subjt:  NPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNP

Query:  PVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSRPVISRH
        PVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSRPVISRH
Subjt:  PVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSRPVISRH

Query:  LAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDELCSNNV
        LAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDELCSNNV
Subjt:  LAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDELCSNNV

Query:  VEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQK
        VEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQK
Subjt:  VEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQK

Query:  WIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHS
        WIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHS
Subjt:  WIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHS

TYK16275.1 uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa]

0.0e+00

91.6

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Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSGFFV
        ISLCQKWIVPSIESQYEEA VI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLY RSYEGLLL+ LGKEESTKAL+EAHSG + 
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSGFFV

Query:  VS
        V+
Subjt:  VS

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]

0.0e+00

92.4

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Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS+ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG
        ISLCQKWIVPSIESQYEEADVI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLYRRSYEGLLL+ LGKEESTKAL+EAHSG
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TZU9 Ribonuclease H

0.0e+00

92.4

Show/hide

Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS+ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG
        ISLCQKWIVPSIESQYEEADVI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLYRRSYEGLLL+ LGKEESTKAL+EAHSG
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG

A0A5D3BTY1 Ribonuclease H

0.0e+00

92.4

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Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS+ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG
        ISLCQKWIVPSIESQYEEADVI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLYRRSYEGLLL+ LGKEESTKAL+EAHSG
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG

A0A5D3C323 RNase H domain-containing protein

0.0e+00

100

Show/hide

Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKHDLVVKSKKKCDHLKDLKLVLDRLRKYQLRM
        ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKHDLVVKSKKKCDHLKDLKLVLDRLRKYQLRM
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKHDLVVKSKKKCDHLKDLKLVLDRLRKYQLRM

Query:  NPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNP
        NPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNP
Subjt:  NPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNP

Query:  PVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSRPVISRH
        PVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSRPVISRH
Subjt:  PVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSRPVISRH

Query:  LAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDELCSNNV
        LAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDELCSNNV
Subjt:  LAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDELCSNNV

Query:  VEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQK
        VEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQK
Subjt:  VEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQK

Query:  WIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHS
        WIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHS
Subjt:  WIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHS

A0A5D3CXS1 Uncharacterized protein

0.0e+00

91.6

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Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSGFFV
        ISLCQKWIVPSIESQYEEA VI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLY RSYEGLLL+ LGKEESTKAL+EAHSG + 
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSGFFV

Query:  VS
        V+
Subjt:  VS

A0A5D3D1E5 Ribonuclease H

0.0e+00

92.4

Show/hide

Query:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID
        MPGLDPKV VHRL IKPEHRPVKQAQRRFRPELISQIEEEVNKLI  GFIREVKYP WIANIV VRKKNGQL VCVDFRDLNNACPKDDFPLPIMEIMID
Subjt:  MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMID

Query:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR
        AT GHE L FMDGSS Y QIR+A++DE KTAFRTPKGIYCYKVMPF LKNAGATYQRAMQRIFDDMLHKH      DLVVKSKKKCDHLKDLKLVLDRLR
Subjt:  ATVGHETLCFMDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLR

Query:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
        KYQLRMNPLKCAFGVTSGKFLGFIVRHR IEVDHSKIDAIQKMPS KNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK
Subjt:  KYQLRMNPLKCAFGVTSGKFLGFIVRHRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIK

Query:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR
        KYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTLTGAELNYS IEKMCLALFFAIDKLRHYMQAFTIHLV KADPVKYILSR
Subjt:  KYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR

Query:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE
        PVIS  LAK AIILQQYDI+YIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAGVGIVFISP+KHMLPYSFTL E
Subjt:  PVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDE

Query:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN
        LCSNNV EYQ  IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDS+ILEHIPRSENKKADALANL TALTVSEDIPIN
Subjt:  LCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPIN

Query:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG
        ISLCQKWIVPSIESQYEEADVI VY IDEEDW QPIIDYL+HGKLPT PRHRAEIRRRAARFIYYKDTLYRRSYEGLLL+ LGKEESTKAL+EAHSG
Subjt:  ISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLQFLGKEESTKALDEAHSG

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.2e-46

28.38

Show/hide

Query:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT
        P  +  + +E+N+ +  G IRE K       ++ V KK G L + VD++ LN     + +PLP++E ++    G      +D  S Y  IR+   DE K 
Subjt:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT

Query:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI
        AFR P+G++ Y VMP+ +  A A +Q  +  I  +    H      D+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +  
Subjt:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI

Query:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG
              ID + +    KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++PPVL      K ++L   A + ++G
Subjt:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG

Query:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP
        A+++Q++D  K   + Y +  ++ A+LNYS+ +K  LA+  ++   RHY+++ TI   +     + ++ R        ++ LA+  + LQ   ++I Y P
Subjt:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP

Query:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM
          A     +AD L+       P+P       D  D  + FV  +
Subjt:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM

P0CT35 Transposon Tf2-2 polyprotein

2.2e-46

28.38

Show/hide

Query:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT
        P  +  + +E+N+ +  G IRE K       ++ V KK G L + VD++ LN     + +PLP++E ++    G      +D  S Y  IR+   DE K 
Subjt:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT

Query:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI
        AFR P+G++ Y VMP+ +  A A +Q  +  I  +    H      D+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +  
Subjt:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI

Query:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG
              ID + +    KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++PPVL      K ++L   A + ++G
Subjt:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG

Query:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP
        A+++Q++D  K   + Y +  ++ A+LNYS+ +K  LA+  ++   RHY+++ TI   +     + ++ R        ++ LA+  + LQ   ++I Y P
Subjt:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP

Query:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM
          A     +AD L+       P+P       D  D  + FV  +
Subjt:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM

P0CT36 Transposon Tf2-3 polyprotein

2.2e-46

28.38

Show/hide

Query:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT
        P  +  + +E+N+ +  G IRE K       ++ V KK G L + VD++ LN     + +PLP++E ++    G      +D  S Y  IR+   DE K 
Subjt:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT

Query:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI
        AFR P+G++ Y VMP+ +  A A +Q  +  I  +    H      D+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +  
Subjt:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI

Query:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG
              ID + +    KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++PPVL      K ++L   A + ++G
Subjt:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG

Query:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP
        A+++Q++D  K   + Y +  ++ A+LNYS+ +K  LA+  ++   RHY+++ TI   +     + ++ R        ++ LA+  + LQ   ++I Y P
Subjt:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP

Query:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM
          A     +AD L+       P+P       D  D  + FV  +
Subjt:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM

P0CT37 Transposon Tf2-4 polyprotein

2.2e-46

28.38

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Query:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT
        P  +  + +E+N+ +  G IRE K       ++ V KK G L + VD++ LN     + +PLP++E ++    G      +D  S Y  IR+   DE K 
Subjt:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT

Query:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI
        AFR P+G++ Y VMP+ +  A A +Q  +  I  +    H      D+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +  
Subjt:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI

Query:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG
              ID + +    KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++PPVL      K ++L   A + ++G
Subjt:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG

Query:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP
        A+++Q++D  K   + Y +  ++ A+LNYS+ +K  LA+  ++   RHY+++ TI   +     + ++ R        ++ LA+  + LQ   ++I Y P
Subjt:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP

Query:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM
          A     +AD L+       P+P       D  D  + FV  +
Subjt:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM

P0CT41 Transposon Tf2-12 polyprotein

2.2e-46

28.38

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Query:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT
        P  +  + +E+N+ +  G IRE K       ++ V KK G L + VD++ LN     + +PLP++E ++    G      +D  S Y  IR+   DE K 
Subjt:  PELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCFMDGSSEYTQIRIAIDDEGKT

Query:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI
        AFR P+G++ Y VMP+ +  A A +Q  +  I  +    H      D+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +  
Subjt:  AFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKH------DLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRDI

Query:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG
              ID + +    KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++PPVL      K ++L   A + ++G
Subjt:  EVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLG

Query:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP
        A+++Q++D  K   + Y +  ++ A+LNYS+ +K  LA+  ++   RHY+++ TI   +     + ++ R        ++ LA+  + LQ   ++I Y P
Subjt:  ALIAQENDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIP

Query:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM
          A     +AD L+       P+P       D  D  + FV  +
Subjt:  QKAVKGQALADFLA-----DHPVPSNWKLCDDLPDEEVLFVESM

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCTGGACTCGATCCAAAGGTGGTCGTTCATCGCTTAGTGATCAAACCAGAGCATCGGCCAGTCAAGCAAGCCCAACGACGATTTCGACCAGAACTCATTTCTCAAAT
CGAGGAAGAGGTAAATAAGCTCATTGGGGTTGGATTTATTCGTGAAGTCAAGTATCCAGCATGGATAGCTAATATTGTTTCAGTAAGGAAGAAGAATGGCCAACTATGTG
TTTGTGTCGATTTTCGTGACTTAAATAACGCATGCCCAAAAGATGACTTTCCTTTGCCTATCATGGAAATCATGATAGATGCAACTGTAGGGCATGAAACTTTATGTTTC
ATGGATGGGTCGTCAGAATATACCCAGATTAGAATAGCTATAGATGACGAGGGGAAAACAGCATTTCGAACTCCAAAAGGTATATACTGTTATAAGGTAATGCCTTTCGA
ATTGAAAAATGCAGGTGCTACATACCAGCGAGCTATGCAAAGGATCTTTGATGATATGCTGCATAAACACGATCTCGTAGTTAAGTCCAAGAAGAAATGCGACCACTTGA
AAGACCTGAAGCTTGTACTTGATCGGCTCAGAAAATATCAACTAAGAATGAACCCTCTCAAGTGTGCATTTGGTGTAACTTCAGGGAAGTTTTTGGGATTTATAGTGAGA
CATCGTGACATCGAAGTTGATCACTCAAAAATTGATGCTATCCAGAAAATGCCAAGTTCGAAGAACCTGCACGAATTGAGACGATTGCAAGGTCGTTTGGCTTACATTAG
AAGGTTTATATCTAATCTTGCAGGTCGGTGTCAACCATTCCAGAGACTGATGAGGAAGGATGCAGTCTTTGATTGGGACCAGTCATGCCAAAATGCATTTGATAGCATAA
AGAAGTATCTGCTCAACCCTCCGGTCTTAAGTGCGCCTGCAGCTGGAAAACCATTAATATTGTATATTGCGGCTCAAGAGACTTCGCTCGGGGCATTAATTGCACAAGAA
AATGATAAGGGTAAGGAATGTGCACTCTACTATCTAACTAGAACTCTGACAGGAGCTGAATTAAATTATTCTCTAATTGAGAAAATGTGTCTCGCCCTCTTCTTTGCAAT
AGATAAACTGAGACATTATATGCAAGCCTTCACTATACATTTGGTGGAAAAAGCTGATCCTGTCAAATATATCTTATCAAGGCCAGTCATCTCGAGACACCTCGCGAAGT
TGGCTATTATACTCCAACAATATGATATTATATATATCCCCCAAAAAGCAGTGAAGGGCCAAGCATTGGCAGATTTCCTGGCTGATCATCCAGTTCCATCAAATTGGAAA
TTATGTGATGACTTACCTGATGAGGAAGTATTGTTTGTTGAAAGCATGGAGCCTTGGTTCATGTTCTTTGATGGTGCGACACGAAGAAGTGGAGCTGGTGTCGGCATTGT
TTTCATTTCTCCTAAGAAACATATGTTGCCATATAGCTTCACACTCGATGAGTTGTGTTCAAATAATGTTGTTGAGTACCAAGACCTAATCATCGGACTCCAAATGGCTT
CAGAATTTGGGATAAAGTACATAGAAATATTCGGCGATTCAAAGTTAATCATAAATCAGCTCTCGTATCAGTACGAGGTAAAGCATCAAGACTTGAAGCCCTACTTTAGT
TATGCTAAAAGATTGATGGACAGATTCGACAGCGTAATATTGGAGCATATACCGAGATCAGAAAATAAGAAAGCTGATGCACTTGCAAATTTGACCACTGCTTTAACAGT
CTCGGAAGACATACCAATAAACATTTCCCTTTGCCAAAAATGGATTGTGCCCTCGATTGAAAGTCAATACGAAGAAGCTGATGTGATATATGTGTATGTAATTGATGAAG
AAGATTGGCACCAGCCCATTATAGACTATTTGAAGCATGGAAAACTTCCCACCGGTCCTCGACATCGAGCTGAAATACGTAGAAGAGCTGCGCGATTTATTTATTACAAA
GATACACTTTATCGACGCTCATATGAGGGACTTCTACTGCAATTCCTAGGAAAAGAGGAATCGACAAAGGCCTTAGATGAAGCTCATTCAGGTTTTTTTGTGGTGTCTGT
CAGTCTGGTCCAAAGCTTCAATATCAGTCGAAAAGAATGGGTTACTACTGGCCTACCATGA

mRNA sequence

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Protein sequence

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MPGLDPKVVVHRLVIKPEHRPVKQAQRRFRPELISQIEEEVNKLIGVGFIREVKYPAWIANIVSVRKKNGQLCVCVDFRDLNNACPKDDFPLPIMEIMIDATVGHETLCF
MDGSSEYTQIRIAIDDEGKTAFRTPKGIYCYKVMPFELKNAGATYQRAMQRIFDDMLHKHDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVR
HRDIEVDHSKIDAIQKMPSSKNLHELRRLQGRLAYIRRFISNLAGRCQPFQRLMRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQE
NDKGKECALYYLTRTLTGAELNYSLIEKMCLALFFAIDKLRHYMQAFTIHLVEKADPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQALADFLADHPVPSNWK
LCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVGIVFISPKKHMLPYSFTLDELCSNNVVEYQDLIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFS
YAKRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVIYVYVIDEEDWHQPIIDYLKHGKLPTGPRHRAEIRRRAARFIYYK
DTLYRRSYEGLLLQFLGKEESTKALDEAHSGFFVVSVSLVQSFNISRKEWVTTGLP

Cmc09g0244081 (gene) of Melon (Charmono) v1.1 genome