; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0244431 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0244431
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr09:7333043..7334505
RNA-Seq ExpressionCmc09g0244431
SyntenyCmc09g0244431
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.9e-21681.29Show/hide
Query:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP
        HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQEYGIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMKP
Subjt:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP

Query:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY
        PPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLNY
Subjt:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY

Query:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL
        FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAVL
Subjt:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL

Query:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP
        RIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQGP
Subjt:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP

Query:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        TLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+TLLLQ +ST EQPADIFTKALPSTRFNQIRTKLKLTATLPP
Subjt:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.9e-21681.29Show/hide
Query:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP
        HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQEYGIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMKP
Subjt:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP

Query:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY
        PPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLNY
Subjt:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY

Query:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL
        FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAVL
Subjt:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL

Query:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP
        RIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQGP
Subjt:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP

Query:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        TLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+TLLLQ +ST EQPADIFTKALPSTRFNQIRTKLKLTATLPP
Subjt:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

KAA0060225.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-21681.12Show/hide
Query:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK
        THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQE+GIDYEETFAPVARMTSVRSLLA AA K+WPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN
        PPPGTSPPPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV
        YFLGLEVSRRS+GYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAV
Subjt:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV

Query:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG
        LRIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQG
Subjt:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG

Query:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        PTLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+ LLLQPVST EQPADIFTKALPSTRFNQIR KLKLTATLPP
Subjt:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.5e-21681.08Show/hide
Query:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP
        HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQEYGIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMKP
Subjt:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP

Query:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY
        PPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLNY
Subjt:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY

Query:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL
        FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAVL
Subjt:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL

Query:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP
        RIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQGP
Subjt:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP

Query:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        TLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+TLLLQ +ST EQPADIFTKALPSTRFNQIRTKLKLTA+LPP
Subjt:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

TYK21532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.0e-21681.12Show/hide
Query:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK
        THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQE+GIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN
        PPPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV
        YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAV
Subjt:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV

Query:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG
        LRIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQG
Subjt:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG

Query:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        PTLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+ LLLQPVST EQPADIFTKALPSTRFNQIR KLKLTATLPP
Subjt:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

TrEMBL top hitse value%identityAlignment
A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-21681.29Show/hide
Query:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP
        HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQEYGIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMKP
Subjt:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP

Query:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY
        PPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLNY
Subjt:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY

Query:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL
        FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAVL
Subjt:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL

Query:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP
        RIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQGP
Subjt:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP

Query:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        TLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+TLLLQ +ST EQPADIFTKALPSTRFNQIRTKLKLTATLPP
Subjt:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

A0A5A7V2X4 Retrovirus-related Pol polyprotein from transposon TNT 1-948.3e-21781.12Show/hide
Query:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK
        THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQE+GIDYEETFAPVARMTSVRSLLA AA K+WPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN
        PPPGTSPPPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV
        YFLGLEVSRRS+GYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAV
Subjt:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV

Query:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG
        LRIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQG
Subjt:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG

Query:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        PTLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+ LLLQPVST EQPADIFTKALPSTRFNQIR KLKLTATLPP
Subjt:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-21681.29Show/hide
Query:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP
        HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQEYGIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMKP
Subjt:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP

Query:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY
        PPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLNY
Subjt:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY

Query:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL
        FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAVL
Subjt:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL

Query:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP
        RIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQGP
Subjt:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP

Query:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        TLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+TLLLQ +ST EQPADIFTKALPSTRFNQIRTKLKLTATLPP
Subjt:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-21681.08Show/hide
Query:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP
        HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQEYGIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMKP
Subjt:  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKP

Query:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY
        PPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLNY
Subjt:  PPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLNY

Query:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL
        FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAVL
Subjt:  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVL

Query:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP
        RIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQGP
Subjt:  RILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQGP

Query:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        TLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+TLLLQ +ST EQPADIFTKALPSTRFNQIRTKLKLTA+LPP
Subjt:  TLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

A0A5D3DD70 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-21681.12Show/hide
Query:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK
        THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YK  LVAKGYSQE+GIDYEETFAPVARMTSVRSLLA AAAK+WPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN
        PPPGTS PPHKVCLLRR LYG KQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI                  A SDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGI------------------ATSDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV
        YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVG+LIYLTVTRPDIAY VHIVSQFM APRTIHFTAV
Subjt:  YFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAV

Query:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG
        LRIL YV  TLGHGL                                            KKQSV SRSSTESEYRALADAT ELLWLRWL  DMGVPQQG
Subjt:  LRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLWLRWLFPDMGVPQQG

Query:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP
        PTLLHC N SAIQIAHNDVFHER KHIENDCHFIRHHLLS+ LLLQPVST EQPADIFTKALPSTRFNQIR KLKLTATLPP
Subjt:  PTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.1e-6431.49Show/hide
Query:  MNYRLLTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLS
        +N   + +TW     P  K  +  +W++ +K +  G    YK  LVA+G++Q+Y IDYEETFAPVAR++S R +L+        + QMDVK AFLNGTL 
Subjt:  MNYRLLTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLS

Query:  EEVYMKPPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ--------------GIATSDL------QHYLGQHFE
        EE+YM+ P G S     VC L + +YG KQ  R WF  F   + +  F +S  D  ++                     IAT D+      + YL + F 
Subjt:  EEVYMKPPPGTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ--------------GIATSDL------QHYLGQHFE

Query:  MKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSL-YRQLVGNLIYLTV-TRPDIAYVVHIVSQFMV
        M DL  + +F+G+ +  + D   LSQ+ Y   +L++  + + N  STPL   ++    +    ED +   R L+G L+Y+ + TRPD+   V+I+S++  
Subjt:  MKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSL-YRQLVGNLIYLTV-TRPDIAYVVHIVSQFMV

Query:  APRTIHFTAVLRILCYVNETLGHGL----------------------------------------------HKKQSVASRSSTESEYRALADATIELLWL
           +  +  + R+L Y+  T+   L                                               K+Q+  + SSTE+EY AL +A  E LWL
Subjt:  APRTIHFTAVLRILCYVNETLGHGL----------------------------------------------HKKQSVASRSSTESEYRALADATIELLWL

Query:  RWLFPDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKL
        ++L   + +  + P  ++  N   I IA+N   H+R KHI+   HF R  + +N + L+ + T  Q ADIFTK LP+ RF ++R KL L
Subjt:  RWLFPDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-6032.7Show/hide
Query:  TWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKPP
        T+  V+LP GKRP+ CKW++K+K   D  +  YK  LV KG+ Q+ GID++E F+PV +MTS+R++L+ AA+    + Q+DVK AFL+G L EE+YM+ P
Subjt:  TWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKPP

Query:  PG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQG-------------IATSD------LQHYLGQHFEMKDLGSL
         G   +   H VC L + LYG KQ PR W+  F S +    +  +  D  ++ +   +              I   D      L+  L + F+MKDLG  
Subjt:  PG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQG-------------IATSD------LQHYLGQHFEMKDLGSL

Query:  NYFLGLEV--SRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHL-------TPYDGVPLEDVSLYRQLVGNLIYLTV-TRPDIAYVVHIVSQFM
           LG+++   R S    LSQ KY   +L R  + ++   STPL  ++ L       T  +   +  V  Y   VG+L+Y  V TRPDIA+ V +VS+F+
Subjt:  NYFLGLEV--SRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHL-------TPYDGVPLEDVSLYRQLVGNLIYLTV-TRPDIAYVVHIVSQFM

Query:  VAPRTIHFTAVLRILCYVNETLGHGL------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWL
          P   H+ AV  IL Y+  T G  L                                           K Q   + S+TE+EY A  +   E++WL+  
Subjt:  VAPRTIHFTAVLRILCYVNETLGHGL------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWL

Query:  FPDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRF
          ++G+ Q+   +++C + SAI ++ N ++H R KHI+   H+IR  +   +L +  +ST E PAD+ TK +P  +F
Subjt:  FPDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRF

P25600 Putative transposon Ty5-1 protein YCL074W1.8e-2232.62Show/hide
Query:  MDVKNAFLNGTLSEEVYMKPPPG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQG-----IATSDL---------
        MDV  AFLN T+ E +Y+K PPG      P  V  L   +YG KQ P  W    ++T+ ++GF     +  L+ R T  G     +   DL         
Subjt:  MDVKNAFLNGTLSEEVYMKPPPG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQG-----IATSDL---------

Query:  ----QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYL-LSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVT-RPD
            +  L + + MKDLG ++ FLGL + + S+G + LS   Y +   + S I       TPL  +  L       L+D++ Y+ +VG L++   T RPD
Subjt:  ----QHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYL-LSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVT-RPD

Query:  IAYVVHIVSQFMVAPRTIHFTAVLRILCYVNET
        I+Y V ++S+F+  PR IH  +  R+L Y+  T
Subjt:  IAYVVHIVSQFMVAPRTIHFTAVLRILCYVNET

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.3e-8638.37Show/hide
Query:  MNYRLLTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTL
        +N ++  HTWD V  PP    I GC+WI+  K +SDG++  YK  LVAKGY+Q  G+DY ETF+PV + TS+R +L  A  + WP+ Q+DV NAFL GTL
Subjt:  MNYRLLTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTL

Query:  SEEVYMKPPPG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIA--------------TSDLQH----YLGQHF
        +++VYM  PPG      P+ VC LR+ LYG KQ PRAW+    + +  +GF +S  DT+LF     + I                  L H     L Q F
Subjt:  SEEVYMKPPPG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIA--------------TSDLQH----YLGQHF

Query:  EMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVA
         +KD   L+YFLG+E  R   G  LSQ +Y  DLLAR+ +  +   +TP+ P+  L+ Y G  L D + YR +VG+L YL  TRPDI+Y V+ +SQFM  
Subjt:  EMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVA

Query:  PRTIHFTAVLRILCYVNETLGHGL-------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWLF
        P   H  A+ RIL Y+  T  HG+                                            KKQ    RSSTE+EYR++A+ + E+ W+  L 
Subjt:  PRTIHFTAVLRILCYVNETLGHGL-------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWLF

Query:  PDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLP
         ++G+    P +++C N  A  +  N VFH R+KHI  D HFIR+ + S  L +  VST +Q AD  TK L  T F    +K+ +T   P
Subjt:  PDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.8e-8337.35Show/hide
Query:  MNYRLLTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTL
        +N ++  HTWD V  PP    I GC+WI+  K +SDG++  YK  LVAKGY+Q  G+DY ETF+PV + TS+R +L  A  + WP+ Q+DV NAFL GTL
Subjt:  MNYRLLTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTL

Query:  SEEVYMKPPPG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIA---------------TSDLQH---YLGQHF
        ++EVYM  PPG      P  VC LR+ +YG KQ PRAW+    + +  +GF +S  DT+LF     + I                T  L+H    L Q F
Subjt:  SEEVYMKPPPG--TSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIA---------------TSDLQH---YLGQHF

Query:  EMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVA
         +K+   L+YFLG+E  R   G  LSQ +Y  DLLAR+ +  +   +TP+  +  LT + G  L D + YR +VG+L YL  TRPD++Y V+ +SQ+M  
Subjt:  EMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVA

Query:  PRTIHFTAVLRILCYVNETLGHGL-------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWLF
        P   H+ A+ R+L Y+  T  HG+                                            KKQ    RSSTE+EYR++A+ + EL W+  L 
Subjt:  PRTIHFTAVLRILCYVNETLGHGL-------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWLF

Query:  PDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLP
         ++G+    P +++C N  A  +  N VFH R+KHI  D HFIR+ + S  L +  VST +Q AD  TK L    F     K+ +    P
Subjt:  PDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.2e-9641.67Show/hide
Query:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK
        THTW+   LPP K+PIGCKW+YKIK +SDGTIE YK  LVAKGY+Q+ GID+ ETF+PV ++TSV+ +LA +A   + L Q+D+ NAFLNG L EE+YMK
Subjt:  THTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPP------GTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTP------------------QGIATSDLQHYLGQHFEMK
         PP      G S PP+ VC L++ +YG KQ  R WF  FS T+   GF  S  D   F + T                      A  +L+  L   F+++
Subjt:  PPP------GTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTP------------------QGIATSDLQHYLGQHFEMK

Query:  DLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRT
        DLG L YFLGLE++R + G  + Q KYA DLL  +G+     +S P+DP+V  + + G    D   YR+L+G L+YL +TR DI++ V+ +SQF  APR 
Subjt:  DLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRT

Query:  IHFTAVLRILCYVNETLGHGL-------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWLFPDM
         H  AV++IL Y+  T+G GL                                            KKQ V S+SS E+EYRAL+ AT E++WL   F ++
Subjt:  IHFTAVLRILCYVNETLGHGL-------------------------------------------HKKQSVASRSSTESEYRALADATIELLWLRWLFPDM

Query:  GVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKAL
         +P   PTLL C N +AI IA N VFHER KHIE+DCH +R   +    L       ++  D FT+ L
Subjt:  GVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKAL

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.6e-0537.68Show/hide
Query:  IYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVLRILCYVNETLGHGLHKKQSVASRSSTESEYRALADA
        +YLT+TRPD+ + V+ +SQF  A RT    AV ++L YV  T+G GL         ++++ + +A AD+
Subjt:  IYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVLRILCYVNETLGHGLHKKQSVASRSSTESEYRALADA

ATMG00810.1 DNA/RNA polymerases superfamily protein1.6e-2336Show/hide
Query:  LGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVS
        L   F MKDLG ++YFLG+++     G  LSQ KYA  +L  +G+ D    STPL   ++ +        D S +R +VG L YLT+TRPDI+Y V+IV 
Subjt:  LGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVS

Query:  QFMVAPRTIHFTAVLRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLW
        Q M  P    F  + R+L YV  T+ HGL+                                           K+Q   SRSSTE+EYRALA    EL W
Subjt:  QFMVAPRTIHFTAVLRILCYVNETLGHGLH-------------------------------------------KKQSVASRSSTESEYRALADATIELLW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.4e-1447.14Show/hide
Query:  TWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAA
        TW  V  P  +  +GCKW++K K HSDGT++  K  LVAKG+ QE GI + ET++PV R  ++R++L  A
Subjt:  TWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAATTACAGGCTCTTAACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGG
TACTATTGAGCATTATAAGACTCATCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACGTCTGTGCGTA
GCTTACTAGCTGCTGCTGCTGCCAAGCGGTGGCCTCTTCTTCAGATGGATGTTAAAAATGCTTTCCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCT
GGTACTTCTCCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGTACTATATGGTTTCAAACAGACTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACT
TGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGGTATTGCCACATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAG
ACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCGGCGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATT
ACTGACTCTAACACAGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGCGTTCCTCTTGAGGATGTCAGTCTGTATCGGCAACTCGTTGGCAATCT
CATCTATCTAACAGTAACTCGCCCAGACATTGCATATGTTGTTCACATTGTTAGCCAATTTATGGTTGCTCCTCGAACCATCCATTTTACTGCCGTACTACGTATCCTTT
GCTATGTCAATGAAACTTTGGGACATGGACTTCATAAGAAACAAAGTGTTGCCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATGCTACCATCGAACTT
TTATGGCTTCGTTGGCTTTTTCCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTCATTGTGGCAATCATAGTGCCATCCAAATTGCCCACAATGATGTTTTTCA
TGAGCGTATAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTAAGCAACACACTTCTTTTGCAACCTGTCTCCACCATTGAGCAACCAGCCGATATCT
TCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGCTGACAGCTACTCTACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAATTACAGGCTCTTAACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGG
TACTATTGAGCATTATAAGACTCATCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACGTCTGTGCGTA
GCTTACTAGCTGCTGCTGCTGCCAAGCGGTGGCCTCTTCTTCAGATGGATGTTAAAAATGCTTTCCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCT
GGTACTTCTCCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGTACTATATGGTTTCAAACAGACTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACT
TGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGGTATTGCCACATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAG
ACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCGGCGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATT
ACTGACTCTAACACAGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGCGTTCCTCTTGAGGATGTCAGTCTGTATCGGCAACTCGTTGGCAATCT
CATCTATCTAACAGTAACTCGCCCAGACATTGCATATGTTGTTCACATTGTTAGCCAATTTATGGTTGCTCCTCGAACCATCCATTTTACTGCCGTACTACGTATCCTTT
GCTATGTCAATGAAACTTTGGGACATGGACTTCATAAGAAACAAAGTGTTGCCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATGCTACCATCGAACTT
TTATGGCTTCGTTGGCTTTTTCCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTCATTGTGGCAATCATAGTGCCATCCAAATTGCCCACAATGATGTTTTTCA
TGAGCGTATAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTAAGCAACACACTTCTTTTGCAACCTGTCTCCACCATTGAGCAACCAGCCGATATCT
TCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGCTGACAGCTACTCTACCACCTTGA
Protein sequenceShow/hide protein sequence
MMNYRLLTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIEHYKTHLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAAAAAKRWPLLQMDVKNAFLNGTLSEEVYMKPPP
GTSPPPHKVCLLRRVLYGFKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIATSDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGI
TDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGNLIYLTVTRPDIAYVVHIVSQFMVAPRTIHFTAVLRILCYVNETLGHGLHKKQSVASRSSTESEYRALADATIEL
LWLRWLFPDMGVPQQGPTLLHCGNHSAIQIAHNDVFHERIKHIENDCHFIRHHLLSNTLLLQPVSTIEQPADIFTKALPSTRFNQIRTKLKLTATLPP