| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025443.1 pol protein [Cucumis melo var. makuwa] | 9.0e-48 | 85.96 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDILV SK EA HEEHLR VLETLR N+LYAKFSKC+FWLK VSFLGHVVS +GVSVDPAKIE VT+WPRPSIVSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| KAA0057168.1 pol protein [Cucumis melo var. makuwa] | 1.5e-47 | 85.09 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDIL+ SK EA HEEHLR VLETLR N+LYAKFSKCEFWLK VSFLGHVVS +GVSVDPAKIE VT+WPRPS VSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.0e-47 | 85.09 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDIL+ SK EA HEEHL VLETLR NKLYAKFSKCEFWLK V+FLGHVVS DGVSVDPAKIE VT+WPRPS VSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| TYK04344.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.6e-47 | 84.21 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDIL+ SK EA+HEEHL VLETLR NKLYAKFSKCEFWLK V+FLGHVVS +GVSVDPAKIE VT+WPRPSIVSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGL GYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| TYK04739.1 pol protein [Cucumis melo var. makuwa] | 9.0e-48 | 85.96 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDILV SK EA HEEHLR VLETLR N+LYAKFSKC+FWLK VSFLGHVVS +GVSVDPAKIE VT+WPRPSIVSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SLA1 Pol protein | 4.3e-48 | 85.96 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDILV SK EA HEEHLR VLETLR N+LYAKFSKC+FWLK VSFLGHVVS +GVSVDPAKIE VT+WPRPSIVSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| A0A5A7UPX4 Pol protein | 7.4e-48 | 85.09 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDIL+ SK EA HEEHLR VLETLR N+LYAKFSKCEFWLK VSFLGHVVS +GVSVDPAKIE VT+WPRPS VSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| A0A5A7VK60 Reverse transcriptase | 9.7e-48 | 85.09 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDIL+ SK EA HEEHL VLETLR NKLYAKFSKCEFWLK V+FLGHVVS DGVSVDPAKIE VT+WPRPS VSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| A0A5D3C2W7 Pol protein | 4.3e-48 | 85.96 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDILV SK EA HEEHLR VLETLR N+LYAKFSKC+FWLK VSFLGHVVS +GVSVDPAKIE VT+WPRPSIVSEIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDF
LGLAGYY++FVEDF
Subjt: LGLAGYYQKFVEDF
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| A0A5D3CCS5 Pol protein | 1.3e-47 | 72.39 | Show/hide |
Query: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
MDLMNRVFKDFL++FVIVFIDDIL+ SK EA HEEHLR VLETLR N+LYAKFSKCEFWLK VSFLGHVVS +GVSVDPAKIE VT+WPRPS V+EIRSF
Subjt: MDLMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSF
Query: LGLAGYYQKFVEDFYLFGARPVRIVFKSLNRSSL
LGLA YY++FVEDF L +++ +++ L
Subjt: LGLAGYYQKFVEDFYLFGARPVRIVFKSLNRSSL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.4e-19 | 41.44 | Show/hide |
Query: MNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGL
MN + + LN +V++DDI+V S H + L LV E L L + KCEF + +FLGHV++ DG+ +P KIE + +P P+ EI++FLGL
Subjt: MNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGL
Query: AGYYQKFVEDF
GYY+KF+ +F
Subjt: AGYYQKFVEDF
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.6e-18 | 34.88 | Show/hide |
Query: MNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGL
++ V ++ + V++DD+++ S+ E+ H H+ VL+ L + K F+ + V +LG +VSKDG DP K++ + +P P V ++RSFLGL
Subjt: MNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGL
Query: AGYYQKFVEDFYLFGARPVRIVFKSLNRS
A YY+ F++DF ARP+ + K N S
Subjt: AGYYQKFVEDFYLFGARPVRIVFKSLNRS
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.8e-19 | 38.74 | Show/hide |
Query: MNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGL
MN + + LN +V++DDI++ S H ++LV L L + KCEF K +FLGH+V+ DG+ +P K++ + S+P P+ EIR+FLGL
Subjt: MNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGL
Query: AGYYQKFVEDF
GYY+KF+ ++
Subjt: AGYYQKFVEDF
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| P92523 Uncharacterized mitochondrial protein AtMg00860 | 1.2e-15 | 39.6 | Show/hide |
Query: HLRLVLETLRTNKLYAKFSKCEFWLKHVSFLG--HVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGLAGYYQKFVEDFYLFGARPVRIVFKSLNRSS
HL +VL+ ++ YA KC F +++LG H++S +GVS DPAK+E + WP P +E+R FLGL GYY++FV+++ + VR + + L ++S
Subjt: HLRLVLETLRTNKLYAKFSKCEFWLKHVSFLG--HVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLGLAGYYQKFVEDFYLFGARPVRIVFKSLNRSS
Query: L
L
Subjt: L
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.5e-16 | 34.82 | Show/hide |
Query: LMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLG
+++ + ++ + V+IDDI+V S+ H ++LRLVL +L L K F V FLG++V+ DG+ DP K+ ++ P P+ V E++ FLG
Subjt: LMNRVFKDFLNTFVIVFIDDILVKSKKEARHEEHLRLVLETLRTNKLYAKFSKCEFWLKHVSFLGHVVSKDGVSVDPAKIEVVTSWPRPSIVSEIRSFLG
Query: LAGYYQKFVEDF
+ YY+KF++D+
Subjt: LAGYYQKFVEDF
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