CuGenDBv2

Gene ID	Cmc09g0244811
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr09:7887019..7889321
RNA-Seq Expression	Cmc09g0244811
Synteny	Cmc09g0244811
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.18

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VET QGE FSIS+DDGLMFE RLCVPEDSAVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

KAA0032541.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.57

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHY+FVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLY EKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYLAEKRRMVETGQGEDFSISADDGLMFE RLCVPED+AVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKREVADFVSRCLVCQQVK+PRQHPAGL+Q LSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

KAA0040542.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

98.49

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL----GFERAEIAVSVGEVTAQ
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL      E     VSVGEVTAQ
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL----GFERAEIAVSVGEVTAQ

Query:  LAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREV
        LAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREV
Subjt:  LAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREV

Query:  ADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIIS
        ADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIIS
Subjt:  ADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIIS

Query:  DRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVG
        DRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVG
Subjt:  DRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVG

Query:  EQRMLGPELVQTTNSAIQKIRARMLTAQSR
        EQRMLGPELVQTTNSAIQKIRARMLTAQSR
Subjt:  EQRMLGPELVQTTNSAIQKIRARMLTAQSR

KAA0045309.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.83

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVV+SFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSIS+DDGLMFE RLCVPEDSAVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLY+TEIVRLHGVPVSIISDRDARFTSKFWKGLQLAL TRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.18

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VET QGE FSIS+DDGLMFE RLCVPEDSAVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

92.18

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VET QGE FSIS+DDGLMFE RLCVPEDSAVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

A0A5A7SSL3 Reverse transcriptase

0.0e+00

92.57

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHY+FVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLY EKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQ NDPYLAEKRRMVETGQGEDFSISADDGLMFE RLCVPED+AVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKREVADFVSRCLVCQQVK+PRQHPAGL+Q LSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

A0A5A7TAT0 DNA/RNA polymerases superfamily protein

0.0e+00

98.49

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL----GFERAEIAVSVGEVTAQ
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL      E     VSVGEVTAQ
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL----GFERAEIAVSVGEVTAQ

Query:  LAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREV
        LAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREV
Subjt:  LAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREV

Query:  ADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIIS
        ADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIIS
Subjt:  ADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIIS

Query:  DRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVG
        DRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVG
Subjt:  DRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVG

Query:  EQRMLGPELVQTTNSAIQKIRARMLTAQSR
        EQRMLGPELVQTTNSAIQKIRARMLTAQSR
Subjt:  EQRMLGPELVQTTNSAIQKIRARMLTAQSR

A0A5A7TVN9 Reverse transcriptase

0.0e+00

92.83

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVV+SFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSIS+DDGLMFE RLCVPEDSAVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLY+TEIVRLHGVPVSIISDRDARFTSKFWKGLQLAL TRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

A0A5D3BTN0 Reverse transcriptase

0.0e+00

92.18

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
        TAFRSRYGHYEFVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
        VSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT+PDGS NFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------
        GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW+HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL                     
Subjt:  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL---------------------

Query:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT
                             FERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VET QGE FSIS+DDGLMFE RLCVPEDSAVKT
Subjt:  --------------------GFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSV WWRGMKR+VADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTN+AIQKIRARMLTAQSR
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.7e-116

32.32

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
         AFR   G +E++VM +G++  PA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DAS   +
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK W+HYL    E  +I TDH++L    T +    N R  RW     +  FE   R 
Subjt:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA

Query:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK
          A  + +  +++                    Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   ++++ +P D+ + 
Subjt:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL
          ++ + H     +HPG   +   +     W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL
        +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+
Subjt:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALY
         L++ +YNN+  +   M PFE ++
Subjt:  HLMEFAYNNSYQATIGMAPFEALY

P0CT35 Transposon Tf2-2 polyprotein

2.7e-116

32.32

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
         AFR   G +E++VM +G++  PA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DAS   +
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK W+HYL    E  +I TDH++L    T +    N R  RW     +  FE   R 
Subjt:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA

Query:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK
          A  + +  +++                    Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   ++++ +P D+ + 
Subjt:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL
          ++ + H     +HPG   +   +     W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL
        +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+
Subjt:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALY
         L++ +YNN+  +   M PFE ++
Subjt:  HLMEFAYNNSYQATIGMAPFEALY

P0CT36 Transposon Tf2-3 polyprotein

2.7e-116

32.32

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
         AFR   G +E++VM +G++  PA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DAS   +
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK W+HYL    E  +I TDH++L    T +    N R  RW     +  FE   R 
Subjt:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA

Query:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK
          A  + +  +++                    Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   ++++ +P D+ + 
Subjt:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL
          ++ + H     +HPG   +   +     W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL
        +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+
Subjt:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALY
         L++ +YNN+  +   M PFE ++
Subjt:  HLMEFAYNNSYQATIGMAPFEALY

P0CT37 Transposon Tf2-4 polyprotein

2.7e-116

32.32

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
         AFR   G +E++VM +G++  PA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DAS   +
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK W+HYL    E  +I TDH++L    T +    N R  RW     +  FE   R 
Subjt:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA

Query:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK
          A  + +  +++                    Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   ++++ +P D+ + 
Subjt:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL
          ++ + H     +HPG   +   +     W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL
        +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+
Subjt:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALY
         L++ +YNN+  +   M PFE ++
Subjt:  HLMEFAYNNSYQATIGMAPFEALY

P0CT41 Transposon Tf2-12 polyprotein

2.7e-116

32.32

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG
         AFR   G +E++VM +G++  PA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEG

Query:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DAS   +
Subjt:  VSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK W+HYL    E  +I TDH++L    T +    N R  RW     +  FE   R 
Subjt:  GCVLMQQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWKHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRW----LELGFE---RA

Query:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK
          A  + +  +++                    Q+S+    + +++    ND  L      E +R+ E       +I   DGL+   ++++ +P D+ + 
Subjt:  EIAVSVGEVTAQLA-------------------QLSVQPTLRQKIIAAQLNDPYLA-----EKRRMVETGQGEDFSISADDGLMF--EERLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL
          ++ + H     +HPG   +   +     W+G+++++ ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL
        +K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+
Subjt:  TKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHL

Query:  HLMEFAYNNSYQATIGMAPFEALY
         L++ +YNN+  +   M PFE ++
Subjt:  HLMEFAYNNSYQATIGMAPFEALY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.4e-27

44.27

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Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACESSFQELKQKLVTAPVLTLPDGSRNFV
        +     +F+ LK  + T PVL LPD    FV
Subjt:  SPACESSFQELKQKLVTAPVLTLPDGSRNFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCTAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAA
GAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGTTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGC
AGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTAC
GAGTTCGTGGTGATGTCTTTCGGCTTGACTAACGGTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGA
CGACATCCTGATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGCTGTATGCCAAGTTCTCCAAGTGTGAAT
TCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCGGTGACCAATTGGCCTCGACCGTCCACGGTT
AGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTT
TGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACATTGCCTGATGGTTCGAGAAACTTTGTGATCTACAGTG
ATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTATCCTACCCACGACTTG
GAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAAGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAA
GGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGGATTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAATTGGCTCAGTTGTCAGTTCAGC
CAACCTTGAGGCAAAAGATCATCGCTGCTCAGTTGAATGATCCTTACTTGGCCGAGAAGCGTCGTATGGTGGAGACAGGGCAAGGTGAAGACTTCTCCATATCCGCTGAC
GATGGCCTTATGTTTGAGGAACGCCTGTGTGTGCCAGAAGACAGCGCAGTTAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTAC
GAAGATGTACCAGGACTTAAGGAGTGTCAATTGGTGGAGGGGCATGAAGAGGGAAGTGGCAGACTTTGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGC
AGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTACACGGTG
ATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTAAGACT
ACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCAT
TCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATATGCTGCGAGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTG
ATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGA
GCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAACTCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHY
EFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTV
SEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTLPDGSRNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDL
ELAAVVFALKIWKHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELGFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISAD
DGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTV
IWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHL
MEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNSAIQKIRARMLTAQSR

Cmc09g0244811 (gene) of Melon (Charmono) v1.1 genome