; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0244941 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0244941
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr09:8065110..8068126
RNA-Seq ExpressionCmc09g0244941
SyntenyCmc09g0244941
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0091.55Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTS+YSLMNTPSP KSLPPIYAADGNCMNITH+GT+NTPS+NLPHTYCVPNLTFNLV VGQLCDLG  VSFS NGCQVQDPQTGQTIGTGRKVGRLFE+L
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKL KQPALSFSTSTSI DKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        V FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTIN LPSSVLQNISPFE+LYGTPPNY NLK FGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFS LSSFH SFSSPQ FFTDTSIDLFP SES  GNELAQSAPTSATSDQSSISDG+P+P PD PPRRSTRVREPPIHLQDY+CF TI+SL+EPT
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ
        SYQEAST+PLWQKAMNDELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSD TIERYKARLVAKG                        LLAVAAAKQ
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ

Query:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND
        WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWF TFSSTITQLGFTSSPHDT LFTRHTPQGIVLLLLYVDDMIITGND
Subjt:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND

Query:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP
        P AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE VSLYRQLVGSLIYLTVT P
Subjt:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP

Query:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
        DIAYAVHIVSQFMA PRTIHFTA+LRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Subjt:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA

Query:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL
        LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALP TRFNQ+RTKLKL
Subjt:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL

Query:  TATLPP
        TATLPP
Subjt:  TATLPP

KAA0040517.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0094.6Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQD QTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTR                        
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
                            ALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARL+AKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
        PP GTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL
        YFLGLEVS RSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVS YRQLVGSLIYLTVTHPDIAYAVHIVSQFM VPRTIHFTA+
Subjt:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL

Query:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG
        LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSST+SEYRALADTTAELLWLRWLLADMGVPQQG
Subjt:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG

Query:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
        PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
Subjt:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0091.65Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTS+YSLMNTPSP KSLPPIYAADGNCMNITH+GT+NTPS+NLPHTYCVPNLTFNLV VGQLCDLG  VSFS NGCQVQDPQTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKL KQPALSFSTSTSI DKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        V FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTIN LPSSVLQNISPFE+LYGTPPNY NLK FGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFS LSSFH SFSSPQ FFTDTSIDLFP SES  GNELAQSAPTSATSDQSSISDG+P+P PD PPRRSTRVREPPIHLQDY+CF TI+SL+EPT
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ
        SYQEAST+PLWQKAMNDELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSD TIERYKARLVAKG                        LLAVAAAKQ
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ

Query:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND
        WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWF TFSSTITQLGFTSSPHDT LFTRHTPQGIVLLLLYVDDMIITGND
Subjt:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND

Query:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP
        P AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE VSLYRQLVGSLIYLTVT P
Subjt:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP

Query:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
        DIAYAVHIVSQFMA PRTIHFTA+LRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Subjt:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA

Query:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL
        LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALP TRFNQ+RTKLKL
Subjt:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL

Query:  TATLPP
        TATLPP
Subjt:  TATLPP

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0091.55Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTS+YSLMNTPSP KSLPPIYAADGNCMNITH+GT+NTPS+NLPHTYCVPNLTFNLV VGQLCDLG  VSFS NGCQVQDPQTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKL KQPALSFSTSTSI DKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        V FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTIN LPSSVLQNISPFE+LYGTPPNY NLK FGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFS LSSFH SFSSPQ FFTDTSIDLFP SES  GNELAQSAPTSATSDQSSISDG+P+P PD PPRRSTRVREPPIHLQDY+CF TI+SL+EPT
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ
        SYQEAST+PLWQKAMNDELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSD TIERYKARLVAKG                        LLAVAAAKQ
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ

Query:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND
        WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWF TFSSTITQLGFTSSPHDT LFTRHTPQGIVLLLLYVDDMIITGND
Subjt:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND

Query:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP
        P AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE VSLYRQLVGSLIYLTVT P
Subjt:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP

Query:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
        DIAYAVHIVSQFMA PRTIHFTA+LRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Subjt:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA

Query:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL
        LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALP TRFNQ+RTKLKL
Subjt:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL

Query:  TATLPP
        TA+LPP
Subjt:  TATLPP

TYK23446.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0094.6Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQD QTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTR                        
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
                            ALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARL+AKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
        PP GTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL
        YFLGLEVS RSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVS YRQLVGSLIYLTVTHPDIAYAVHIVSQFM VPRTIHFTA+
Subjt:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL

Query:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG
        LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSST+SEYRALADTTAELLWLRWLLADMGVPQQG
Subjt:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG

Query:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
        PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
Subjt:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP

TrEMBL top hitse value%identityAlignment
A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0091.55Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTS+YSLMNTPSP KSLPPIYAADGNCMNITH+GT+NTPS+NLPHTYCVPNLTFNLV VGQLCDLG  VSFS NGCQVQDPQTGQTIGTGRKVGRLFE+L
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKL KQPALSFSTSTSI DKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        V FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTIN LPSSVLQNISPFE+LYGTPPNY NLK FGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFS LSSFH SFSSPQ FFTDTSIDLFP SES  GNELAQSAPTSATSDQSSISDG+P+P PD PPRRSTRVREPPIHLQDY+CF TI+SL+EPT
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ
        SYQEAST+PLWQKAMNDELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSD TIERYKARLVAKG                        LLAVAAAKQ
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ

Query:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND
        WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWF TFSSTITQLGFTSSPHDT LFTRHTPQGIVLLLLYVDDMIITGND
Subjt:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND

Query:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP
        P AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE VSLYRQLVGSLIYLTVT P
Subjt:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP

Query:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
        DIAYAVHIVSQFMA PRTIHFTA+LRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Subjt:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA

Query:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL
        LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALP TRFNQ+RTKLKL
Subjt:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL

Query:  TATLPP
        TATLPP
Subjt:  TATLPP

A0A5A7TG30 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0094.6Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQD QTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTR                        
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
                            ALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARL+AKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
        PP GTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL
        YFLGLEVS RSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVS YRQLVGSLIYLTVTHPDIAYAVHIVSQFM VPRTIHFTA+
Subjt:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL

Query:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG
        LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSST+SEYRALADTTAELLWLRWLLADMGVPQQG
Subjt:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG

Query:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
        PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
Subjt:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0091.65Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTS+YSLMNTPSP KSLPPIYAADGNCMNITH+GT+NTPS+NLPHTYCVPNLTFNLV VGQLCDLG  VSFS NGCQVQDPQTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKL KQPALSFSTSTSI DKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        V FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTIN LPSSVLQNISPFE+LYGTPPNY NLK FGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFS LSSFH SFSSPQ FFTDTSIDLFP SES  GNELAQSAPTSATSDQSSISDG+P+P PD PPRRSTRVREPPIHLQDY+CF TI+SL+EPT
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ
        SYQEAST+PLWQKAMNDELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSD TIERYKARLVAKG                        LLAVAAAKQ
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ

Query:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND
        WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWF TFSSTITQLGFTSSPHDT LFTRHTPQGIVLLLLYVDDMIITGND
Subjt:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND

Query:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP
        P AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE VSLYRQLVGSLIYLTVT P
Subjt:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP

Query:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
        DIAYAVHIVSQFMA PRTIHFTA+LRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Subjt:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA

Query:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL
        LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALP TRFNQ+RTKLKL
Subjt:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL

Query:  TATLPP
        TATLPP
Subjt:  TATLPP

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0091.55Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTS+YSLMNTPSP KSLPPIYAADGNCMNITH+GT+NTPS+NLPHTYCVPNLTFNLV VGQLCDLG  VSFS NGCQVQDPQTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSP SISAPVTDSDTYQWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKL KQPALSFSTSTSI DKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        V FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTIN LPSSVLQNISPFE+LYGTPPNY NLK FGCACFVLL PHEHTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFS LSSFH SFSSPQ FFTDTSIDLFP SES  GNELAQSAPTSATSDQSSISDG+P+P PD PPRRSTRVREPPIHLQDY+CF TI+SL+EPT
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ
        SYQEAST+PLWQKAMNDELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSD TIERYKARLVAKG                        LLAVAAAKQ
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQ

Query:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND
        WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWF TFSSTITQLGFTSSPHDT LFTRHTPQGIVLLLLYVDDMIITGND
Subjt:  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGND

Query:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP
        P AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE VSLYRQLVGSLIYLTVT P
Subjt:  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHP

Query:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
        DIAYAVHIVSQFMA PRTIHFTA+LRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Subjt:  DIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA

Query:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL
        LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALP TRFNQ+RTKLKL
Subjt:  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL

Query:  TATLPP
        TA+LPP
Subjt:  TATLPP

A0A5D3DIH5 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0094.6Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL
        MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQD QTGQTIGTGRKVGRLFELL
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELL

Query:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
        SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY
Subjt:  SLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYY

Query:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
        VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGT VQRSCPHTSQQNGRAECKHRHILDSLRAILLSA
Subjt:  VSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA

Query:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
        SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT
Subjt:  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT
        FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTR                        
Subjt:  FWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPT

Query:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
                            ALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARL+AKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK
Subjt:  SYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMK

Query:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
        PP GTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN
Subjt:  PPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN

Query:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL
        YFLGLEVS RSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVS YRQLVGSLIYLTVTHPDIAYAVHIVSQFM VPRTIHFTA+
Subjt:  YFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTAL

Query:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG
        LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSST+SEYRALADTTAELLWLRWLLADMGVPQQG
Subjt:  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQG

Query:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
        PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP
Subjt:  PTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.0e-11328.75Show/hide
Query:  NLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSSISAPVTDSDTYQ-WHLRLGHASPEKL-----RHLIS----INHLN
        NL+ V +L + G+ + F  +G  +          +G        L ++ V +  + S      + ++ WH R GH S  KL     +++ S    +N+L 
Subjt:  NLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSSISAPVTDSDTYQ-WHLRLGHASPEKL-----RHLIS----INHLN

Query:  STTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTL
         + +     CLN K  + P       T I  +P  ++HSD+ GP    T+    Y+V F+D F+ +   Y +K++S +   + +F       F+  +  L
Subjt:  STTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTL

Query:  RTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSASCPEKFWGEAALTSVYTINHLPSSVLQNIS--PFEKLYGTPPNY
          DN  EY  + +  F  ++G     + PHT Q NG +E   R I +  R ++  A   + FWGEA LT+ Y IN +PS  L + S  P+E  +   P  
Subjt:  RTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSASCPEKFWGEAALTSVYTINHLPSSVLQNIS--PFEKLYGTPPNY

Query:  YNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMF-SHLSSFHTSF-----SSPQPFFTDTSIDL-----
         +L+ FG   +V +  ++  K + ++    F+GY  +  GF+ WD ++ +  ++R V   E  M  S    F T F      S    F + S  +     
Subjt:  YNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMF-SHLSSFHTSF-----SSPQPFFTDTSIDL-----

Query:  -----------------------FP-----------PSESPLGNEL-------------AQSAPTSATSDQSSISDGSPEPTP---------------DT
                               FP           P+ES   + +                +      D  + S GS  P                 D 
Subjt:  -----------------------FP-----------PSESPLGNEL-------------AQSAPTSATSDQSSISDGSPEPTP---------------DT

Query:  PP---------RRSTRVREPP-------------IHLQDYYCFCTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYK
        P          RRS R++  P             + L  +  F  + +  +   Y++  ++  W++A+N EL A +  +TW     P  K  +  +W++ 
Subjt:  PP---------RRSTRVREPP-------------IHLQDYYCFCTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYK

Query:  IKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLK
        +K +      RYKARLVA+G                        +L++       + QMDVK AFLNGTL EE+YM+ P G S     VC L +A+YGLK
Subjt:  IKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLK

Query:  QAPRAWFDTFSSTITQLGFTSSPHDTTLF--TRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKY
        QA R WF+ F   + +  F +S  D  ++   +      + +LLYVDD++I   D   +++ + YL + F M DL  + +F+G+ +  + D   LSQ+ Y
Subjt:  QAPRAWFDTFSSTITQLGFTSSPHDTTLF--TRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKY

Query:  VSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEE--VSLYRQLVGSLIYLTV-THPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFS
        V  +L++  + + N  STPL   ++   Y+ +  +E   +  R L+G L+Y+ + T PD+  AV+I+S++ +   +  +  L R+LRY+KGT+   L F 
Subjt:  VSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEE--VSLYRQLVGSLIYLTV-THPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFS

Query:  SQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIA
           +    + GY D+DWAG   DR+STTGY F + D +LI W +K+Q+ V+ SSTE+EY AL +   E LWL++LL  + +  + P  +Y DN+  I IA
Subjt:  SQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIA

Query:  HNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL
        +N   H+R KHI+   HF R  + +N + L+ + T  Q ADIFTK LP  RF +LR KL L
Subjt:  HNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.8e-13835.48Show/hide
Query:  WHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRSA
        WH R+GH S + L+ L   + ++         C  C   KQ  +SF TS+       DL++SD+ GP    ++ G +Y+V+FIDD SR  W+Y LK +  
Subjt:  WHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRSA

Query:  LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSASCPEKFWGEAALTSVYTINHL
        + + + +F  ++  +    +K LR+DN  EY       + S  G   +++ P T Q NG AE  +R I++ +R++L  A  P+ FWGEA  T+ Y IN  
Subjt:  LSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSASCPEKFWGEAALTSVYTINHL

Query:  PSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMFSHLSSFHTSFSSPQ
        PS  L    P         +Y +LK FGC  F  +   + TKL+ ++  C F+GYG +  G+R WDP+  ++  SR V F E  + +         +   
Subjt:  PSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMFSHLSSFHTSFSSPQ

Query:  P-FFTDTSIDLFPPSESPLGNELAQSA--PTSATSDQSSISDGSPEPTPDT-------PPRRSTRVREPPIHLQDYYC--FCTIISLVEPTSYQEASTNP
        P F T  S    P S     +E+++    P         + +G  E    T       P RRS R   P +  + Y    +  I    EP S +E  ++P
Subjt:  P-FFTDTSIDLFPPSESPLGNELAQSA--PTSATSDQSSISDGSPEPTPDT-------PPRRSTRVREPPIHLQDYYC--FCTIISLVEPTSYQEASTNP

Query:  ---LWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQWPLLQM
              KAM +E+++L+K  T+  V+LP GKRP+ CKW++K+K   D  + RYKARLV KG                        +L++AA+    + Q+
Subjt:  ---LWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQWPLLQM

Query:  DVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAW---FDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDP
        DVK AFL+G L EE+YM+ P G   +   H VC L ++LYGLKQAPR W   FD+F  + T L   S P     F R +    ++LLLYVDDM+I G D 
Subjt:  DVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAW---FDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDP

Query:  QAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLT-PYDGVPLEEVS-----LYRQLVGSLI
          I+ L+  L + F+MKDLG     LG+++     S    LSQ KY+  +L R  + ++   STPL  ++ L+       +EE        Y   VGSL+
Subjt:  QAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLT-PYDGVPLEEVS-----LYRQLVGSLI

Query:  YLTV-THPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRS
        Y  V T PDIA+AV +VS+F+  P   H+ A+  ILRY++GT G  L F   S  +L GY+DAD AGD  +R+S+TGY F      ISW+SK Q  V+ S
Subjt:  YLTV-THPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRS

Query:  STESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRF
        +TE+EY A  +T  E++WL+  L ++G+ Q+   ++YCD++SAI ++ N ++H RTKHI+   H+IR  +   +L +  +ST E PAD+ TK +P  +F
Subjt:  STESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRF

P92519 Uncharacterized mitochondrial protein AtMg008101.7e-4946.88Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYR
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KY   +L  +G+ D    STPL   ++ +        + S +R
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYR

Query:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ
         +VG+L YLT+T PDI+YAV+IV Q M  P    F  L R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q
Subjt:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ

Query:  SVVSRSSTESEYRALADTTAELLW
          VSRSSTE+EYRALA T AEL W
Subjt:  SVVSRSSTESEYRALADTTAELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE17.5e-18636.75Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPS----MNLPHTYCVPNLTFNLVFVGQLCDL-GLIVSFSPNGCQVQDPQTGQTIGTGRKVGR
        +TS+++ ++   P      +  ADG+ + I+H G+ +  +    +NL +   VPN+  NL+ V +LC+  G+ V F P   QV+D  TG  +  G+    
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPS----MNLPHTYCVPNLTFNLVFVGQLCDL-GLIVSFSPNGCQVQDPQTGQTIGTGRKVGR

Query:  LFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLI---SINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTS
        L+E         S  ++P + +    WH RLGH +P  L  +I   S++ LN + KF+  +C +C + K   + FS ST  S +P + I+SD+W  +P  
Subjt:  LFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLI---SINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTS

Query:  TVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDS
        +   YRYYV F+D F+R+TW+Y LK +S +  T+I F N++  +F   I T  +DN  E+    L  + SQ G     S PHT + NG +E KHRHI+++
Subjt:  TVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDS

Query:  LRAILLSASCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNR
           +L  AS P+ +W  A   +VY IN LP+ +LQ  SPF+KL+GT PNY  L+ FGCAC+  L P+   KL+ ++R C FLGY      + C    ++R
Subjt:  LRAILLSASCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNR

Query:  LRISRHVTFWE----------------------------HTMF------------------------------------SHL-SSFHTSFSS--------
        L ISRHV F E                            HT                                      S+L SSF +SF S        
Subjt:  LRISRHVTFWE----------------------------HTMF------------------------------------SHL-SSFHTSFSS--------

Query:  ---PQPFFTDTSIDL-----------FPPSESPLGNELAQSAPTSATSDQS------SISDGSPEPTPDT----PPRRSTRV----REPPIHLQD-----
           PQP    T                P +ESP  ++LAQS  T A S  S      S S  S  PTP +    PP    ++     + P++        
Subjt:  ---PQPFFTDTSIDL-----------FPPSESPLGNELAQSAPTSATSDQS------SISDGSPEPTPDT----PPRRSTRV----REPPIHLQD-----

Query:  ----------YYCFCTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDDTIERYKARLVAKG--------
                  Y    ++ +  EP +  +A  +  W+ AM  E+ A    HTWD V  PP    I GC+WI+  K +SD ++ RYKARLVAKG        
Subjt:  ----------YYCFCTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDDTIERYKARLVAKG--------

Query:  ----------------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDT
                        +L VA  + WP+ Q+DV NAFL GTL+++VYM  PPG      P+ VC LR+ALYGLKQAPRAW+    + +  +GF +S  DT
Subjt:  ----------------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDT

Query:  TLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTP
        +LF     + IV +L+YVDD++ITGNDP  + +    L Q F +KD   L+YFLG+E      G  LSQ +Y+ DLLAR+ +  +   +TP+ P+  L+ 
Subjt:  TLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTP

Query:  YDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFY
        Y G  L + + YR +VGSL YL  T PDI+YAV+ +SQFM +P   H  AL RILRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  Y
Subjt:  YDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFY

Query:  LGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVS
        LG   ISW SKKQ  V RSSTE+EYR++A+T++E+ W+  LL ++G+    P ++YCDN  A  +  N VFH R KHI  D HFIR+ + S  L +  VS
Subjt:  LGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVS

Query:  TTEQPADIFTKALPFTRFNQLRTKLKLTATLP
        T +Q AD  TK L  T F    +K+ +T   P
Subjt:  TTEQPADIFTKALPFTRFNQLRTKLKLTATLP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.8e-17935.83Show/hide
Query:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTP----SMNLPHTYCVPNLTFNLVFVGQLCDLGLI-VSFSPNGCQVQDPQTGQTIGTGRKVGR
        +TS+++ ++   P      +  ADG+ + ITH G+ + P    S++L     VPN+  NL+ V +LC+   + V F P   QV+D  TG  +  G+    
Subjt:  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTP----SMNLPHTYCVPNLTFNLVFVGQLCDLGLI-VSFSPNGCQVQDPQTGQTIGTGRKVGR

Query:  LFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINH----LNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPT
        L+E       + S  ++P + +    WH RLGH S   L  +IS NH    LN + K +  +C +C + K   + FS ST  S KP + I+SD+W  +P 
Subjt:  LFELLSLQVPSPSSISAPVTDSDTYQWHLRLGHASPEKLRHLISINH----LNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPT

Query:  STVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILD
         ++  YRYYV F+D F+R+TW+Y LK +S +  T+I F +++  +F   I TL +DN  E+    L  +LSQ G     S PHT + NG +E KHRHI++
Subjt:  STVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILD

Query:  SLRAILLSASCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSN
            +L  AS P+ +W  A   +VY IN LP+ +LQ  SPF+KL+G PPNY  LK FGCAC+  L P+   KLE +++ C F+GY      + C    + 
Subjt:  SLRAILLSASCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSN

Query:  RLRISRHVTFWEHTMFSHLSSFHTSFSSPQ--------PFFT-------------------DTSIDLFPPSESPLGNELAQSA--PTSATSDQSSISDGS
        RL  SRHV F E       ++F  S S  Q        P  T                   DTS    P S SPL      S+  P+S+ S  SS    +
Subjt:  RLRISRHVTFWEHTMFSHLSSFHTSFSSPQ--------PFFT-------------------DTSIDLFPPSESPLGNELAQSA--PTSATSDQSSISDGS

Query:  P------------------------------EPTPDTP----------------PRRSTRVREP-----------------------------PIHL---
        P                               P+P++P                P  ST + EP                             P++    
Subjt:  P------------------------------EPTPDTP----------------PRRSTRVREP-----------------------------PIHL---

Query:  ------------QDYYCFCTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDDTIERYKARLVAKG----
                    Q Y    ++ +  EP +  +A  +  W++AM  E+ A    HTWD V  PP    I GC+WI+  K +SD ++ RYKARLVAKG    
Subjt:  ------------QDYYCFCTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDDTIERYKARLVAKG----

Query:  --------------------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSS
                            +L VA  + WP+ Q+DV NAFL GTL++EVYM  PPG      P  VC LR+A+YGLKQAPRAW+    + +  +GF +S
Subjt:  --------------------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSS

Query:  PHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNV
          DT+LF     + I+ +L+YVDD++ITGND   +      L Q F +K+   L+YFLG+E      G  LSQ +Y  DLLAR+ +  +   +TP+  + 
Subjt:  PHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNV

Query:  HLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTG
         LT + G  L + + YR +VGSL YL  T PD++YAV+ +SQ+M +P   H+ AL R+LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST G
Subjt:  HLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTG

Query:  YCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLL
        Y  YLG   ISW SKKQ  V RSSTE+EYR++A+T++EL W+  LL ++G+    P ++YCDN  A  +  N VFH R KHI  D HFIR+ + S  L +
Subjt:  YCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLL

Query:  QPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLP
          VST +Q AD  TK L    F     K+ +    P
Subjt:  QPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.9e-12444Show/hide
Query:  APTSATS----DQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYC---------------------------FCTIISLVEPTSYQEASTNPLWQKAM
        A TS++S      ++I +  PEP+  T  RR+ +    P +LQDYYC                              I    EP++Y EA    +W  AM
Subjt:  APTSATS----DQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYC---------------------------FCTIISLVEPTSYQEASTNPLWQKAM

Query:  NDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQWPLLQMDVKNAFLNG
        +DE+ A+E THTW+   LPP K+PIGCKW+YKIK +SD TIERYKARLVAKG                        +LA++A   + L Q+D+ NAFLNG
Subjt:  NDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG------------------------LLAVAAAKQWPLLQMDVKNAFLNG

Query:  TLSEEVYMKPPP------GTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQH
         L EE+YMK PP      G S PP+ VC L++++YGLKQA R WF  FS T+   GF  S  D T F + T    + +L+YVDD+II  N+  A+ +L+ 
Subjt:  TLSEEVYMKPPP------GTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQH

Query:  YLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIV
         L   F+++DLG L YFLGLE++  + G  + Q KY  DLL  +G+     +S P+DP+V  + + G    +   YR+L+G L+YL +T  DI++AV+ +
Subjt:  YLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIYLTVTHPDIAYAVHIV

Query:  SQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELL
        SQF   PR  H  A+++IL YIKGT+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLISW+SKKQ VVS+SS E+EYRAL+  T E++
Subjt:  SQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELL

Query:  WLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIR
        WL     ++ +P   PTLL+CDN +AI IA N VFHERTKHIE+DCH +R
Subjt:  WLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIR

ATMG00240.1 Gag-Pol-related retrotransposon family protein5.8e-1646.84Show/hide
Query:  IYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC
        +YLT+T PD+ +AV+ +SQF +  RT    A+ ++L Y+KGT+G GL +S+ S L L  ++D+DWA  P  RRS TG+C
Subjt:  IYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-5046.88Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYR
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KY   +L  +G+ D    STPL   ++ +        + S +R
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYR

Query:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ
         +VG+L YLT+T PDI+YAV+IV Q M  P    F  L R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q
Subjt:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ

Query:  SVVSRSSTESEYRALADTTAELLW
          VSRSSTE+EYRALA T AEL W
Subjt:  SVVSRSSTESEYRALADTTAELLW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.6e-1350Show/hide
Query:  EPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG
        EP S   A  +P W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSD T++R KARLVAKG
Subjt:  EPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLVAKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTAATTATTCTCTTATGAACACTCCTAGTCCTGCTAAATCTTTACCTCCCATTTATGCTGCTGATGGCAATTGTATGAATATCACCCACATTGGCACTGTTAA
TACTCCCAGTATGAATCTTCCCCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATTTGTTGGTCAATTATGCGACCTTGGCTTAATTGTCTCTTTTTCTCCTA
ATGGTTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATT
TCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCCTCTCCTGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTAC
CAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGTTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTGATAAACCTTTTGATTTAATCCATTCTG
ACATTTGGGGTCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTCATTTATTGATGATTTCTCTCGTTTTACATGGATTTATTTTCTCAAACACCGCTCT
GCATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTCT
TCTATCTTTTCTTTCCCAACAGGGCACTCATGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCCGAGTGCAAACATCGCCACATTCTTGACTCATTAC
GCGCCATTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATCAATCATCTTCCTTCCTCCGTTCTTCAGAACATCTCT
CCATTTGAAAAACTATATGGTACTCCTCCCAACTATTATAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACG
TGCCCGCCTCTGTTGTTTTCTTGGCTATGGCACAAAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGC
ATACTATGTTCTCTCATTTGTCCTCCTTCCACACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACACATCTATTGACCTTTTTCCTCCCTCTGAGTCCCCTCTTGGT
AATGAGCTTGCTCAATCTGCACCTACTTCGGCAACCTCGGACCAATCGTCCATCTCTGATGGCAGTCCTGAACCTACTCCAGACACCCCTCCTCGTCGTTCTACCCGGGT
AAGGGAACCCCCTATTCATCTCCAAGATTATTACTGTTTTTGCACTATTATTTCTCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTAATCCTTTATGGCAGAAAG
CGATGAATGATGAATTACAGGCTCTTGAAAAGACGCATACTTGGGACTATGTTGACTTACCTCCTGGTAAACGACCAATTGGCTGTAAGTGGATCTACAAAATCAAGACG
CACTCTGATGACACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGTTTATTAGCTGTTGCTGCCGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTGAAAAATGC
TTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTATGTCTCCTGCGTCGCGCACTATATGGCCTCAAAC
AGGCTCCACGAGCTTGGTTTGATACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTACACTCTTTACTCGCCACACACCCCAGGGAATT
GTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGG
ATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCACCGCTCAGATGGGTATTTATTGTCCCAAGCTAAATATGTCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACT
CTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCACTTGACCCCTTATGATGGTGTTCCTCTTGAAGAAGTCAGTCTGTATCGGCAACTAGTTGGCAGTCTCATCTAT
CTAACAGTGACTCATCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGTTCCTCGAACCATCCATTTTACTGCTCTACTACGTATTCTTCGCTATAT
CAAAGGGACTTTAGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCCGATTGGGCTGGGGATCCTACTGATCGGCGTTCTACCA
CAGGATACTGCTTCTACTTAGGCGACTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACT
ACCGCTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAAGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCTCACAA
TGATGTTTTCCATGAGCGTACAAAGCACATTGAAAATGATTGCCACTTCATTCGTCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAGC
CAGCTGATATCTTCACCAAAGCCTTACCCTTTACTCGCTTCAATCAGTTGCGTACCAAACTCAAGCTGACAGCTACTCTGCCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTAATTATTCTCTTATGAACACTCCTAGTCCTGCTAAATCTTTACCTCCCATTTATGCTGCTGATGGCAATTGTATGAATATCACCCACATTGGCACTGTTAA
TACTCCCAGTATGAATCTTCCCCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATTTGTTGGTCAATTATGCGACCTTGGCTTAATTGTCTCTTTTTCTCCTA
ATGGTTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATT
TCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCCTCTCCTGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTAC
CAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGTTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTGATAAACCTTTTGATTTAATCCATTCTG
ACATTTGGGGTCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTCATTTATTGATGATTTCTCTCGTTTTACATGGATTTATTTTCTCAAACACCGCTCT
GCATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTCT
TCTATCTTTTCTTTCCCAACAGGGCACTCATGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCCGAGTGCAAACATCGCCACATTCTTGACTCATTAC
GCGCCATTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATCAATCATCTTCCTTCCTCCGTTCTTCAGAACATCTCT
CCATTTGAAAAACTATATGGTACTCCTCCCAACTATTATAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACG
TGCCCGCCTCTGTTGTTTTCTTGGCTATGGCACAAAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGC
ATACTATGTTCTCTCATTTGTCCTCCTTCCACACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACACATCTATTGACCTTTTTCCTCCCTCTGAGTCCCCTCTTGGT
AATGAGCTTGCTCAATCTGCACCTACTTCGGCAACCTCGGACCAATCGTCCATCTCTGATGGCAGTCCTGAACCTACTCCAGACACCCCTCCTCGTCGTTCTACCCGGGT
AAGGGAACCCCCTATTCATCTCCAAGATTATTACTGTTTTTGCACTATTATTTCTCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTAATCCTTTATGGCAGAAAG
CGATGAATGATGAATTACAGGCTCTTGAAAAGACGCATACTTGGGACTATGTTGACTTACCTCCTGGTAAACGACCAATTGGCTGTAAGTGGATCTACAAAATCAAGACG
CACTCTGATGACACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGTTTATTAGCTGTTGCTGCCGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTGAAAAATGC
TTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTATGTCTCCTGCGTCGCGCACTATATGGCCTCAAAC
AGGCTCCACGAGCTTGGTTTGATACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTACACTCTTTACTCGCCACACACCCCAGGGAATT
GTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGG
ATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCACCGCTCAGATGGGTATTTATTGTCCCAAGCTAAATATGTCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACT
CTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCACTTGACCCCTTATGATGGTGTTCCTCTTGAAGAAGTCAGTCTGTATCGGCAACTAGTTGGCAGTCTCATCTAT
CTAACAGTGACTCATCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGTTCCTCGAACCATCCATTTTACTGCTCTACTACGTATTCTTCGCTATAT
CAAAGGGACTTTAGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCCGATTGGGCTGGGGATCCTACTGATCGGCGTTCTACCA
CAGGATACTGCTTCTACTTAGGCGACTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACT
ACCGCTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAAGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCTCACAA
TGATGTTTTCCATGAGCGTACAAAGCACATTGAAAATGATTGCCACTTCATTCGTCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAGC
CAGCTGATATCTTCACCAAAGCCTTACCCTTTACTCGCTTCAATCAGTTGCGTACCAAACTCAAGCTGACAGCTACTCTGCCACCTTGA
Protein sequenceShow/hide protein sequence
MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVGQLCDLGLIVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSSI
SAPVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRS
ALSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTHVQRSCPHTSQQNGRAECKHRHILDSLRAILLSASCPEKFWGEAALTSVYTINHLPSSVLQNIS
PFEKLYGTPPNYYNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMFSHLSSFHTSFSSPQPFFTDTSIDLFPPSESPLG
NELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRVREPPIHLQDYYCFCTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKT
HSDDTIERYKARLVAKGLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGI
VLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYVSDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLYRQLVGSLIY
LTVTHPDIAYAVHIVSQFMAVPRTIHFTALLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADT
TAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATLPP