CuGenDBv2

Gene ID	Cmc09g0245301
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr09:8565610..8567911
RNA-Seq Expression	Cmc09g0245301
Synteny	Cmc09g0245301
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0016020 - membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.91

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Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQ+LKRVYWWRNMK EVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLH VPVSIV D+DARFTSKFWKGLQT MGTRLDFSTAFHPQTDGQTERLNQVLEDMLR CALEFPGSWDSHLHLMEFAYNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVLRFERRGKLSPRFV PF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0040470.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

99.58

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Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAY
        EILERIGP ++
Subjt:  EILERIGPVAY

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.59

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Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMY+++KRVYWWRNMK EVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWK LQT MGTRLDFSTAFHPQTDGQTERLNQVLE MLR CALEFPGSWDSHLHLMEF YNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRF+GPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.18

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Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQ+LKRVYWWRNMK EVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWKGLQT MGTRLDFSTAFHPQ DGQTERLNQVLEDMLR CALEFPGSWDSHLHLMEFAYNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.18

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQ+LKR+YWWRNMK EVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYT 
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWKGLQT MGTRLDFSTAFHPQTDGQTERLN+VLEDMLR CALEFPGSWDSHLHLMEFAYNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

95.91

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQ+LKRVYWWRNMK EVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLH VPVSIV D+DARFTSKFWKGLQT MGTRLDFSTAFHPQTDGQTERLNQVLEDMLR CALEFPGSWDSHLHLMEFAYNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVLRFERRGKLSPRFV PF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7TAY4 Reverse transcriptase

0.0e+00

99.58

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAY
        EILERIGP ++
Subjt:  EILERIGPVAY

A0A5A7U330 Reverse transcriptase

0.0e+00

96.59

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMY+++KRVYWWRNMK EVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWK LQT MGTRLDFSTAFHPQTDGQTERLNQVLE MLR CALEFPGSWDSHLHLMEF YNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRF+GPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

96.18

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQ+LKRVYWWRNMK EVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWKGLQT MGTRLDFSTAFHPQ DGQTERLNQVLEDMLR CALEFPGSWDSHLHLMEFAYNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UP94 Pol protein

0.0e+00

96.18

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAVTGW
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA
        TRP TVSEVRSFLGLA YYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLV APVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYA
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIA+SVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA
        PGSTKMYQ+LKR+YWWRNMK EVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYT 
Subjt:  PGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI
        SKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWKGLQT MGTRLDFSTAFHPQTDGQTERLN+VLEDMLR CALEFPGSWDSHLHLMEFAYNN+YQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF
        GMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQK  SRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

4.7e-108

32.53

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R
         +P    E+R FLG  +Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV  PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME
          V    + TA + A+++   ++   G P  I+ D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME

Query:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE
         +YNN   +   M PFE ++      SP+   E+        E  Q T +  Q     ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

4.7e-108

32.53

Show/hide

Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R
         +P    E+R FLG  +Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV  PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME
          V    + TA + A+++   ++   G P  I+ D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME

Query:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE
         +YNN   +   M PFE ++      SP+   E+        E  Q T +  Q     ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

4.7e-108

32.53

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Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R
         +P    E+R FLG  +Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV  PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME
          V    + TA + A+++   ++   G P  I+ D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME

Query:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE
         +YNN   +   M PFE ++      SP+   E+        E  Q T +  Q     ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

4.7e-108

32.53

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Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R
         +P    E+R FLG  +Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV  PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME
          V    + TA + A+++   ++   G P  I+ D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME

Query:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE
         +YNN   +   M PFE ++      SP+   E+        E  Q T +  Q     ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

4.7e-108

32.53

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Query:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW
        M +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGW

Query:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R
         +P    E+R FLG  +Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV  PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----R

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME
          V    + TA + A+++   ++   G P  I+ D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLME

Query:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE
         +YNN   +   M PFE ++      SP+   E+        E  Q T +  Q     ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNNYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

5.6e-24

42.75

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Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKVGVSVDLAKIEAVTGWTRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS D AK+EA+ GW  P   +E+R FLGL  YYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKVGVSVDLAKIEAVTGWTRPFTVSEVRSFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVIAPVLTVPDGSGSFV
        ++    +F+ LK  +   PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVIAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTTGGTTTGACGAATGCTCCGGTAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGAT
ATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGC
AGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGTTGGAGTCTCTGTGGATCTAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTTCACAGTCAGTGAGGTTCGT
AGCTTTCTGGGTTTAGCAGATTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAA
GGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTATCGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGA
AGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAGGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCA
GTGGTTTTTGCTTTAAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATAT
GAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATT
CAGCAGCACTTATTACTCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAATGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAG
CCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGA
CGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTA
CGAAGATGTATCAGAACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGTGAGGTGGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGG
CAGAAACCTGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGT
GATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTTCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAACTGTACATGTCGGAGATAGTGAGAT
TACATGGAGTGCCAGTGTCGATTGTTTTTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGTTATGGGCACGAGGTTAGACTTTAGTACAGCT
TTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGTGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTT
GATGGAATTTGCTTATAATAACAATTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGTAAATGTTGCAGATCCCCGGTTTGCTGGGGTGAGGTGGGTG
AGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGACTAGTTCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTG
AGGCGGAAGGATCTCGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGT
TGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGT
GA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPVVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDLAKIEAVTGWTRPFTVSEVR
SFLGLADYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVIAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASRQLKSHEQNYPTHDLELAA
VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAMSVGAVTMQLAQLTVQ
PTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQNLKRVYWWRNMKSEVAEFVSRCLVCQQVKAPR
QKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTVMGTRLDFSTA
FHPQTDGQTERLNQVLEDMLRVCALEFPGSWDSHLHLMEFAYNNNYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKTSSRMHTAQSRQKSYADV
RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

Cmc09g0245301 (gene) of Melon (Charmono) v1.1 genome