; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0245511 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0245511
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationCMiso1.1chr09:8941228..8942487
RNA-Seq ExpressionCmc09g0245511
SyntenyCmc09g0245511
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038376.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-19377.48Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNKTQALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK TPYAVVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ M+KFA+ HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKV LL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

TYK03080.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.7e-23294.03Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MKNDIRVYVDQC ICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRM+DSILVVVDRLSKYAHFVA RHPFS KTVA++FTKEIV LHGY R
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRDQLF+SHFWKELFRLQGTKLK STAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLA  EY YNTN HASIKTTPYAVVYGQAPPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQSSTTPNN VESQLQARDETLAALKRHLQHAQD MKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRR DKLSPKYFGPYMVMGRVGEV YLLDLPD
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLKRAVGDKHLIQPDIS+INDQMELVVEPDHVSQLRWNDAE DWEYLVHWKDQ DHE TWESYATLVNQFPDLHLEDKV LLHGGIA+P
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMGRKDISE
        PVTQVYHRKRK GRKDISE
Subjt:  PVTQVYHRKRKMGRKDISE

TYK10423.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]5.8e-19377.24Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNK QALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK+TPY VVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ M+KFA++HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKVALL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-19377.48Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNK QALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK TPYAVVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ M+KFA++HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKVALL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

TYK22994.1 putative membrane protein YjcL-like [Cucumis melo var. makuwa]8.9e-19477.72Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNK QALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK TPYAVVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ MKKFA++HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKVALL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

TrEMBL top hitse value%identityAlignment
A0A5A7T836 Ty3/gypsy retrotransposon protein2.1e-19377.48Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNKTQALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK TPYAVVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ M+KFA+ HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKV LL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

A0A5D3BD16 Ty3/gypsy retrotransposon protein2.8e-19377.24Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNK QALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK TPY VVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ M+KFA++HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKVALL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

A0A5D3BVC8 Ty3-gypsy retrotransposon protein1.8e-23294.03Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MKNDIRVYVDQC ICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRM+DSILVVVDRLSKYAHFVA RHPFS KTVA++FTKEIV LHGY R
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRDQLF+SHFWKELFRLQGTKLK STAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLA  EY YNTN HASIKTTPYAVVYGQAPPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQSSTTPNN VESQLQARDETLAALKRHLQHAQD MKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRR DKLSPKYFGPYMVMGRVGEV YLLDLPD
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLKRAVGDKHLIQPDIS+INDQMELVVEPDHVSQLRWNDAE DWEYLVHWKDQ DHE TWESYATLVNQFPDLHLEDKV LLHGGIA+P
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMGRKDISE
        PVTQVYHRKRK GRKDISE
Subjt:  PVTQVYHRKRKMGRKDISE

A0A5D3DD68 Ty3/gypsy retrotransposon protein1.3e-19377.48Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNK QALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK TPYAVVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ M+KFA++HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKVALL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

A0A5D3DH98 Putative membrane protein YjcL-like4.3e-19477.72Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        MK DI+ YVD C +CQQNK QALSPAGLLQPLPIPNR+WEDISMDF+EGLPRS+ +D+ILVVVDRLSKYAHF+ L HPFS K VA+ F KE+V LHGYPR
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY
        SIVSDRD++F+SHFW+ELFRLQGT+LK STAYHPQTDGQTEVVNKCLELYLRCLCQ++ KSWSDK+A  EY YNTN  +SIK TPYAVVYGQ PPPIISY
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISY

Query:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD
        GQ+ TTPN+ VE QLQ+RDE L  LKRHLQHAQ+ MKKFA++HRRDVVFDIGD VYLKLQPYRQ+SVAK+R +KLSP+YFGPY V+GRVGEVAYLLDLP+
Subjt:  GQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPD

Query:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP
        TAKIHPVFHVSQLK+A+GDKH + PD+++INDQMELV+EP++V Q RWN+AE DWEYLV WKDQ  HEATWESYA L +QFP+ HLEDKVALL GGIARP
Subjt:  TAKIHPVFHVSQLKRAVGDKHLIQPDISVINDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARP

Query:  PVTQVYHRKRKMG
        P+TQVY R+ K G
Subjt:  PVTQVYHRKRKMG

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein5.7e-5035.31Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        ++  I+ YV  C  CQ NK++   P G LQP+P   R WE +SMDFI  LP S  Y+++ VVVDR SK A  V      + +  A  F + ++   G P+
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII
         I++D D +F S  WK+        +K S  Y PQTDGQTE  N+ +E  LRC+C   P +W D ++ V+  YN   H++ + TP+ +V  Y  A  P+ 
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII

Query:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD
            S  T  N  E+      +    +K HL      MKK+ D+  +++  F  GD V +K    R K+    + +KL+P + GP+ V+ + G   Y LD
Subjt:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD

Query:  LPDTAK--IHPVFHVSQLKR
        LPD+ K      FHVS L++
Subjt:  LPDTAK--IHPVFHVSQLKR

P0CT35 Transposon Tf2-2 polyprotein5.7e-5035.31Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        ++  I+ YV  C  CQ NK++   P G LQP+P   R WE +SMDFI  LP S  Y+++ VVVDR SK A  V      + +  A  F + ++   G P+
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII
         I++D D +F S  WK+        +K S  Y PQTDGQTE  N+ +E  LRC+C   P +W D ++ V+  YN   H++ + TP+ +V  Y  A  P+ 
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII

Query:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD
            S  T  N  E+      +    +K HL      MKK+ D+  +++  F  GD V +K    R K+    + +KL+P + GP+ V+ + G   Y LD
Subjt:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD

Query:  LPDTAK--IHPVFHVSQLKR
        LPD+ K      FHVS L++
Subjt:  LPDTAK--IHPVFHVSQLKR

P0CT36 Transposon Tf2-3 polyprotein5.7e-5035.31Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        ++  I+ YV  C  CQ NK++   P G LQP+P   R WE +SMDFI  LP S  Y+++ VVVDR SK A  V      + +  A  F + ++   G P+
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII
         I++D D +F S  WK+        +K S  Y PQTDGQTE  N+ +E  LRC+C   P +W D ++ V+  YN   H++ + TP+ +V  Y  A  P+ 
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII

Query:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD
            S  T  N  E+      +    +K HL      MKK+ D+  +++  F  GD V +K    R K+    + +KL+P + GP+ V+ + G   Y LD
Subjt:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD

Query:  LPDTAK--IHPVFHVSQLKR
        LPD+ K      FHVS L++
Subjt:  LPDTAK--IHPVFHVSQLKR

P0CT41 Transposon Tf2-12 polyprotein5.7e-5035.31Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        ++  I+ YV  C  CQ NK++   P G LQP+P   R WE +SMDFI  LP S  Y+++ VVVDR SK A  V      + +  A  F + ++   G P+
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII
         I++D D +F S  WK+        +K S  Y PQTDGQTE  N+ +E  LRC+C   P +W D ++ V+  YN   H++ + TP+ +V  Y  A  P+ 
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII

Query:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD
            S  T  N  E+      +    +K HL      MKK+ D+  +++  F  GD V +K    R K+    + +KL+P + GP+ V+ + G   Y LD
Subjt:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD

Query:  LPDTAK--IHPVFHVSQLKR
        LPD+ K      FHVS L++
Subjt:  LPDTAK--IHPVFHVSQLKR

Q9UR07 Transposon Tf2-11 polyprotein5.7e-5035.31Show/hide
Query:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR
        ++  I+ YV  C  CQ NK++   P G LQP+P   R WE +SMDFI  LP S  Y+++ VVVDR SK A  V      + +  A  F + ++   G P+
Subjt:  MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPR

Query:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII
         I++D D +F S  WK+        +K S  Y PQTDGQTE  N+ +E  LRC+C   P +W D ++ V+  YN   H++ + TP+ +V  Y  A  P+ 
Subjt:  SIVSDRDQLFISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVV--YGQAPPPII

Query:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD
            S  T  N  E+      +    +K HL      MKK+ D+  +++  F  GD V +K    R K+    + +KL+P + GP+ V+ + G   Y LD
Subjt:  SYGQSSTTPNNLVESQLQARDETLAALKRHLQHAQDHMKKFADVHRRDV-VFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLD

Query:  LPDTAK--IHPVFHVSQLKR
        LPD+ K      FHVS L++
Subjt:  LPDTAK--IHPVFHVSQLKR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATGACATTCGAGTCTATGTGGATCAATGCCCGATATGCCAGCAAAATAAGACCCAAGCTCTCTCACCCGCCGGCTTGCTGCAGCCTCTGCCAATCCCAAATCG
TCTTTGGGAAGACATATCGATGGATTTTATTGAAGGCCTCCCTCGCTCCCGTATGTATGATTCAATCTTGGTGGTGGTAGATCGGTTGAGCAAGTATGCTCACTTTGTTG
CCTTACGCCATCCCTTCTCAACAAAAACAGTAGCGATGGAGTTTACAAAGGAGATCGTGCTTCTTCATGGTTACCCTAGGTCCATTGTATCGGATCGCGACCAATTATTT
ATAAGTCACTTTTGGAAGGAGCTGTTTCGTCTACAGGGAACCAAGCTGAAGTGTAGCACGGCATACCACCCACAAACCGATGGCCAAACTGAGGTAGTTAATAAATGCCT
CGAATTGTACCTCCGCTGCCTGTGTCAAGATCGGCCGAAATCTTGGAGTGACAAGTTGGCCAGGGTAGAATATTTGTATAACACCAATTGTCACGCTTCAATTAAGACAA
CTCCTTATGCCGTGGTGTATGGACAGGCCCCTCCTCCCATCATTTCCTATGGTCAAAGCAGCACGACTCCAAATAATTTGGTTGAATCGCAGCTACAAGCTAGAGATGAG
ACGTTAGCAGCCCTGAAACGCCACTTACAGCATGCCCAGGATCATATGAAGAAATTCGCCGATGTCCATCGAAGGGATGTGGTGTTCGATATCGGTGACTGGGTCTACTT
GAAGCTACAACCATATCGACAGAAATCAGTGGCAAAACGACGCTATGATAAGCTATCTCCGAAGTATTTTGGCCCTTACATGGTCATGGGGCGCGTGGGGGAGGTGGCTT
ATTTATTGGACCTGCCGGACACTGCCAAAATTCACCCCGTCTTCCATGTTTCTCAACTAAAAAGAGCAGTAGGAGATAAACACTTGATCCAACCGGATATCTCAGTGATT
AATGACCAAATGGAACTTGTGGTGGAACCCGACCACGTATCCCAACTTCGATGGAATGACGCTGAATGGGATTGGGAATACTTAGTCCATTGGAAGGATCAATCGGATCA
TGAAGCTACGTGGGAATCCTACGCCACTTTGGTCAATCAGTTCCCCGATCTCCACCTTGAGGACAAGGTGGCTCTTCTCCATGGGGGTATTGCTAGGCCTCCGGTAACAC
AAGTTTATCATAGGAAGAGAAAGATGGGCAGGAAGGACATTTCAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATGACATTCGAGTCTATGTGGATCAATGCCCGATATGCCAGCAAAATAAGACCCAAGCTCTCTCACCCGCCGGCTTGCTGCAGCCTCTGCCAATCCCAAATCG
TCTTTGGGAAGACATATCGATGGATTTTATTGAAGGCCTCCCTCGCTCCCGTATGTATGATTCAATCTTGGTGGTGGTAGATCGGTTGAGCAAGTATGCTCACTTTGTTG
CCTTACGCCATCCCTTCTCAACAAAAACAGTAGCGATGGAGTTTACAAAGGAGATCGTGCTTCTTCATGGTTACCCTAGGTCCATTGTATCGGATCGCGACCAATTATTT
ATAAGTCACTTTTGGAAGGAGCTGTTTCGTCTACAGGGAACCAAGCTGAAGTGTAGCACGGCATACCACCCACAAACCGATGGCCAAACTGAGGTAGTTAATAAATGCCT
CGAATTGTACCTCCGCTGCCTGTGTCAAGATCGGCCGAAATCTTGGAGTGACAAGTTGGCCAGGGTAGAATATTTGTATAACACCAATTGTCACGCTTCAATTAAGACAA
CTCCTTATGCCGTGGTGTATGGACAGGCCCCTCCTCCCATCATTTCCTATGGTCAAAGCAGCACGACTCCAAATAATTTGGTTGAATCGCAGCTACAAGCTAGAGATGAG
ACGTTAGCAGCCCTGAAACGCCACTTACAGCATGCCCAGGATCATATGAAGAAATTCGCCGATGTCCATCGAAGGGATGTGGTGTTCGATATCGGTGACTGGGTCTACTT
GAAGCTACAACCATATCGACAGAAATCAGTGGCAAAACGACGCTATGATAAGCTATCTCCGAAGTATTTTGGCCCTTACATGGTCATGGGGCGCGTGGGGGAGGTGGCTT
ATTTATTGGACCTGCCGGACACTGCCAAAATTCACCCCGTCTTCCATGTTTCTCAACTAAAAAGAGCAGTAGGAGATAAACACTTGATCCAACCGGATATCTCAGTGATT
AATGACCAAATGGAACTTGTGGTGGAACCCGACCACGTATCCCAACTTCGATGGAATGACGCTGAATGGGATTGGGAATACTTAGTCCATTGGAAGGATCAATCGGATCA
TGAAGCTACGTGGGAATCCTACGCCACTTTGGTCAATCAGTTCCCCGATCTCCACCTTGAGGACAAGGTGGCTCTTCTCCATGGGGGTATTGCTAGGCCTCCGGTAACAC
AAGTTTATCATAGGAAGAGAAAGATGGGCAGGAAGGACATTTCAGAGTAG
Protein sequenceShow/hide protein sequence
MKNDIRVYVDQCPICQQNKTQALSPAGLLQPLPIPNRLWEDISMDFIEGLPRSRMYDSILVVVDRLSKYAHFVALRHPFSTKTVAMEFTKEIVLLHGYPRSIVSDRDQLF
ISHFWKELFRLQGTKLKCSTAYHPQTDGQTEVVNKCLELYLRCLCQDRPKSWSDKLARVEYLYNTNCHASIKTTPYAVVYGQAPPPIISYGQSSTTPNNLVESQLQARDE
TLAALKRHLQHAQDHMKKFADVHRRDVVFDIGDWVYLKLQPYRQKSVAKRRYDKLSPKYFGPYMVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHLIQPDISVI
NDQMELVVEPDHVSQLRWNDAEWDWEYLVHWKDQSDHEATWESYATLVNQFPDLHLEDKVALLHGGIARPPVTQVYHRKRKMGRKDISE