; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0245791 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0245791
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr09:9309077..9309931
RNA-Seq ExpressionCmc09g0245791
SyntenyCmc09g0245791
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD6453934.1 hypothetical protein E3N88_08640 [Mikania micrantha]7.3e-11570.77Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QPEG  VSG E+KVCKLRKSLY LKQAPK+WYE F+ TL  +G+ +N+SD+CVYSK     Y+LICLYVDDMLIFG +M  I  TK FLSS FEMKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE DVILGVKI++    +SLCQSHY+E++LKKFD F+++PV+TP+D S  LKKN   SVSQ EYAKIIGSVM+LMNYTRPD+ Y VSRLSRYTHNP + H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        W A+  L+RYL+GT++ CLH+NKF  VLEGYCDANWVTDNDEV+STSGYVF++GGGAISWKS+KQTCI RST+ES+FI+LELAG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

KAG7551885.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]1.8e-10566.2Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QPEG  + GQENKVCKL KSLY LKQAPKQW+E F+NTL+ NGF  N  DTCV+SKV    Y++ICLYVDDMLI GT++E++ +TK+FLSS F+MKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE DVILG+K+ K  +  SL QSHY+EKILKKF  +D    ++P+D+S HL +N+G SV+Q EYAK+IGSVMYLMN TRPD+ Y VSRLSRYTHNP   H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        W AL  L+RYLKGTID+ L ++    VLE YCDANW +DNDEVNSTSG+VF L GGAI+WKS KQTCI RST+ES+ I+LELAG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

KAG7571733.1 Integrase catalytic core [Arabidopsis suecica]6.2e-10666.55Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QPEG  + GQENKVCKL KSLY LKQAPKQW+E F+NTL+ NGF  N  DTCV+SKV    Y++ICLYVDDMLI GT++E++ +TK+FLSS F+MKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE DVILG+K+ K  +  SL QSHY+EKILKKF  +D    ++P+D+S HL +N+G SV+Q EYAK+IGSVMYLMN TRPD+ YAVSRLSRYTHNP   H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        W AL  L+RYLKGTID+ L ++    VLE YCDANW +DNDEVNSTSG+VF L GGAI+WKS KQTCI RST+ES+ I+LELAG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

KAG7592238.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]1.8e-10566.2Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QPEG  + GQENKVCKL KSLY LKQAPKQW+E F+NTL+ NGF  N  DTCV+SKV    Y++ICLYVDDMLI GT++E++ +TK+FLSS F+MKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE DVILG+K+ K  +  SL QSHY+EKILKKF  +D    ++P+D+S HL +N+G SV+Q EYAK+IGSVMYLMN TRPD+ Y VSRLSRYTHNP   H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        W AL  L+RYLKGTID+ L ++    VLE YCDANW +DNDEVNSTSG+VF L GGAI+WKS KQTCI RST+ES+ I+LELAG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]3.9e-14890.85Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        MTQPEG K+SGQENKVCKLRKSLY LKQAPKQWYE FNNTLI NGFKINSSDTCVYSK+ GAD ILICLYVDDMLIFGTNMELIT+TK FLSSHFEMKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE DVILGVKIRKNKTS+SLCQSHYVEKILKKFDSFDVSPVRTPFD SKHLKKNKG+SVSQPEYAKIIGSVMYLMNYTRPD+ YAVSRLSRYTHNP+RYH
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        WDAL HLLRYLKGTIDYCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKS KQTCI RST+ES+FI+LELAG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

TrEMBL top hitse value%identityAlignment
A0A2N9EQT1 Integrase catalytic domain-containing protein2.4e-11168.31Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QPEG  V GQENKVCKLRKSLY LKQAPKQW+E F+ TL++NGF +N SD CVYSK  GA  ++ICLYVDDMLIFGT+M  + NTK FLSS+F+MKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE D+ILG++I +N   ++L QSHY+EK+LKKF+ +D  PVRTP+D S HLKKN G+ VSQ EYAKIIGSVM+LMN TRPD+ YAVSRLSRYTHNP   H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        W+A+  LL+YLKGT++  L +     VLEGYCDANW++DNDE NSTSGYVF LGGGAISWKS+KQTC  RST+ES+F++LE AG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

A0A2N9H4B0 Uncharacterized protein2.4e-11168.31Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QPEG  V GQENKVCKLRKSLY LKQAPKQW+E F+ TL++NGF +N SD CVYSK  GA  ++ICLYVDDMLIFGT+M  + NTK FLSS+F+MKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE D+ILG++I +N   ++L QSHY+EK+LKKF+ +D  PVRTP+D S HLKKN G+ VSQ EYAKIIGSVM+LMN TRPD+ YAVSRLSRYTHNP   H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        W+A+  LL+YLKGT++  L +     VLEGYCDANW++DNDE NSTSGYVF LGGGAISWKS+KQTC  RST+ES+F++LE AG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

A0A5D3C5T2 Ty1-copia retrotransposon protein1.9e-14890.85Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        MTQPEG K+SGQENKVCKLRKSLY LKQAPKQWYE FNNTLI NGFKINSSDTCVYSK+ GAD ILICLYVDDMLIFGTNMELIT+TK FLSSHFEMKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE DVILGVKIRKNKTS+SLCQSHYVEKILKKFDSFDVSPVRTPFD SKHLKKNKG+SVSQPEYAKIIGSVMYLMNYTRPD+ YAVSRLSRYTHNP+RYH
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        WDAL HLLRYLKGTIDYCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKS KQTCI RST+ES+FI+LELAG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

A0A5N6PGV2 Reverse transcriptase Ty1/copia-type domain-containing protein3.5e-11570.77Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QPEG  VSG E+KVCKLRKSLY LKQAPK+WYE F+ TL  +G+ +N+SD+CVYSK     Y+LICLYVDDMLIFG +M  I  TK FLSS FEMKDL
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GE DVILGVKI++    +SLCQSHY+E++LKKFD F+++PV+TP+D S  LKKN   SVSQ EYAKIIGSVM+LMNYTRPD+ Y VSRLSRYTHNP + H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
        W A+  L+RYL+GT++ CLH+NKF  VLEGYCDANWVTDNDEV+STSGYVF++GGGAISWKS+KQTCI RST+ES+FI+LELAG
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

A0A6A2Y4J7 Uncharacterized protein8.2e-10467.52Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M QP G +  G E KV +L+KSLY LKQAPKQWYE F+ T+++ GF +N SD CVYSK+F  + ++I LYVDDMLIF +N+E I   K FLS+ FEM  L
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        GEVDVILGV++ K +   SLCQ+HY++K+LKKFDSFDV PVRTP+D S HL KNKG+SVSQ EYAK+IGS+M+LMNYTRPD+ YAVSRLSRYTHNP   H
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIE
        W AL  LL+YLKGT+D+ L F  F  VLEGYCDANWV+DNDEV+STSGYVF LGG AISWKS+KQTCI RST+E
Subjt:  WDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIE

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-3934.97Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFG--ADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMK
        M  P+G  +S   + VCKL K++Y LKQA + W+E F   L    F  +S D C+Y    G   + I + LYVDD++I   +M  + N K +L   F M 
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFG--ADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMK

Query:  DLGEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDR
        DL E+   +G++I   +  + L QS YV+KIL KF+  + + V TP  +  + +    +         +IG +MY+M  TRPD+  AV+ LSRY+   + 
Subjt:  DLGEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDR

Query:  YHWDALCHLLRYLKGTIDYCLHFNKFLVV---LEGYCDANWVTDNDEVNSTSGYVF-LLGGGAISWKSAKQTCIVRSTIESKFISL
          W  L  +LRYLKGTID  L F K L     + GY D++W     +  ST+GY+F +     I W + +Q  +  S+ E+++++L
Subjt:  YHWDALCHLLRYLKGTIDYCLHFNKFLVV---LEGYCDANWVTDNDEVNSTSGYVF-LLGGGAISWKSAKQTCIVRSTIESKFISL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-6043.43Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGA-DYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKD
        M QPEG +V+G+++ VCKL KSLY LKQAP+QWY  F++ + +  +    SD CVY K F   ++I++ LYVDDMLI G +  LI   K  LS  F+MKD
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGA-DYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKD

Query:  LGEVDVILGVKIRKNKTS--MSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLK----------KNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVS
        LG    ILG+KI + +TS  + L Q  Y+E++L++F+  +  PV TP   + HLK          + KGN    P Y+  +GS+MY M  TRPD+ +AV 
Subjt:  LGEVDVILGVKIRKNKTS--MSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLK----------KNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVS

Query:  RLSRYTHNPDRYHWDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG
         +SR+  NP + HW+A+  +LRYL+GT   CL F     +L+GY DA+   D D   S++GY+F   GGAISW+S  Q C+  ST E+++I+    G
Subjt:  RLSRYTHNPDRYHWDALCHLLRYLKGTIDYCLHFNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG

P25600 Putative transposon Ty5-1 protein YCL074W2.0e-3032.45Show/hide
Query:  QPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDLGE
        QP G       + V +L   +Y LKQAP  W E+ NNTL   GF  +  +  +Y +      I I +YVDD+L+   + ++    K  L+  + MKDLG+
Subjt:  QPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDLGE

Query:  VDVILGVKIRKNKT-SMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQ-PEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH
        VD  LG+ I ++    ++L    Y+ K   + +       +TP   SK L +     +     Y  I+G +++  N  RPD+ Y VS LSR+   P   H
Subjt:  VDVILGVKIRKNKT-SMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQ-PEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYH

Query:  WDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAK
         ++   +LRYL  T   CL +     + L  YCDA+    +D  +ST GYV LL G  ++W S K
Subjt:  WDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.6e-5039.72Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M+QP G     + N VCKLRK+LY LKQAP+ WY    N L+  GF  + SDT ++    G   + + +YVDD+LI G +  L+ NT   LS  F +KD 
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQP-EYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRY
         E+   LG++ ++  T + L Q  Y+  +L + +     PV TP   S  L    G  ++ P EY  I+GS+ YL  +TRPD+ YAV+RLS++ H P   
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQP-EYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRY

Query:  HWDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISL
        H  AL  +LRYL GT ++ +   K   + L  Y DA+W  D D+  ST+GY+  LG   ISW S KQ  +VRS+ E+++ S+
Subjt:  HWDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-4838.65Show/hide
Query:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL
        M+QP G     + + VC+LRK++Y LKQAP+ WY      L+  GF  + SDT ++    G   I + +YVDD+LI G +  L+ +T   LS  F +K+ 
Subjt:  MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDL

Query:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQP-EYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRY
         ++   LG++ ++    + L Q  Y   +L + +     PV TP  TS  L  + G  +  P EY  I+GS+ YL  +TRPD+ YAV+RLS+Y H P   
Subjt:  GEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQP-EYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRY

Query:  HWDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISL
        HW+AL  +LRYL GT D+ +   K   + L  Y DA+W  D D+  ST+GY+  LG   ISW S KQ  +VRS+ E+++ S+
Subjt:  HWDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.3e-4033.46Show/hide
Query:  NKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDLGEVDVILGVKIRK
        N VC L+KS+Y LKQA +QW+  F+ TLI  GF  + SD   + K+    ++ + +YVDD++I   N   +   K  L S F+++DLG +   LG++I +
Subjt:  NKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDLGEVDVILGVKIRK

Query:  NKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNS-VSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYHWDALCHLLRYLK
        +   +++CQ  Y   +L +       P   P D S     + G   V    Y ++IG +MYL   TR D+ +AV++LS+++  P   H  A+  +L Y+K
Subjt:  NKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNS-VSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYHWDALCHLLRYLK

Query:  GTIDYCLHF-NKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELA
        GT+   L + ++  + L+ + DA++ +  D   ST+GY   LG   ISWKS KQ  + +S+ E+++ +L  A
Subjt:  GTIDYCLHF-NKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELA

ATMG00240.1 Gag-Pol-related retrotransposon family protein5.1e-0531.33Show/hide
Query:  MYLMNYTRPDVVYAVSRLSRYTHNPDRYHWDALCHLLRYLKGTIDYCLHFNKFL-VVLEGYCDANWVTDNDEVNSTSGYVFLL
        MYL   TRPD+ +AV+RLS+++         A+  +L Y+KGT+   L ++    + L+ + D++W +  D   S +G+  L+
Subjt:  MYLMNYTRPDVVYAVSRLSRYTHNPDRYHWDALCHLLRYLKGTIDYCLHFNKFL-VVLEGYCDANWVTDNDEVNSTSGYVFLL

ATMG00810.1 DNA/RNA polymerases superfamily protein2.7e-3033.18Show/hide
Query:  ICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDLGEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAK
        + LYVDD+L+ G++  L+      LSS F MKDLG V   LG++I+ + + + L Q+ Y E+IL      D  P+ TP     +   +        ++  
Subjt:  ICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDLGEVDVILGVKIRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAK

Query:  IIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYHWDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQ
        I+G++ YL   TRPD+ YAV+ + +  H P    +D L  +LRY+KGTI + L+ +K   + ++ +CD++W        ST+G+   LG   ISW + +Q
Subjt:  IIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYHWDALCHLLRYLKGTIDYCLHFNK-FLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQ

Query:  TCIVRSTIESKFISLEL
          + RS+ E+++ +L L
Subjt:  TCIVRSTIESKFISLEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAACCAGAAGGCGTTAAAGTTTCTGGGCAAGAAAACAAAGTGTGTAAGTTGAGAAAATCCCTATACGATCTCAAGCAAGCTCCCAAGCAGTGGTATGAAAATTT
TAATAATACGTTGATAAACAATGGATTTAAAATAAATTCCTCAGACACGTGTGTTTATTCAAAGGTGTTTGGAGCTGATTACATATTAATATGTCTATATGTTGATGACA
TGTTAATCTTTGGAACAAACATGGAGTTAATAACTAATACTAAGTTATTTCTCTCATCACACTTTGAAATGAAAGACCTAGGAGAAGTAGACGTAATCCTAGGTGTTAAA
ATCAGGAAAAATAAAACTAGTATGTCTCTATGTCAATCTCACTACGTGGAGAAAATACTAAAGAAGTTTGATTCATTTGATGTTTCTCCAGTGAGAACTCCCTTTGACAC
TAGTAAACATCTTAAGAAGAATAAAGGAAATAGTGTGTCTCAACCTGAATATGCAAAGATCATAGGTAGTGTGATGTATTTAATGAATTACACTAGACCTGATGTTGTAT
ATGCTGTCAGTAGATTGAGTAGATATACACATAATCCTGATAGATACCACTGGGATGCCTTATGCCATCTATTGAGATATCTTAAAGGGACGATAGATTACTGTTTACAC
TTCAACAAATTTCTTGTCGTATTAGAAGGATATTGTGATGCAAATTGGGTCACAGATAATGATGAGGTTAACTCCACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAGC
AATATCTTGGAAGTCTGCAAAACAGACTTGTATAGTTAGATCCACGATAGAATCCAAATTTATATCATTAGAGTTGGCAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACACAACCAGAAGGCGTTAAAGTTTCTGGGCAAGAAAACAAAGTGTGTAAGTTGAGAAAATCCCTATACGATCTCAAGCAAGCTCCCAAGCAGTGGTATGAAAATTT
TAATAATACGTTGATAAACAATGGATTTAAAATAAATTCCTCAGACACGTGTGTTTATTCAAAGGTGTTTGGAGCTGATTACATATTAATATGTCTATATGTTGATGACA
TGTTAATCTTTGGAACAAACATGGAGTTAATAACTAATACTAAGTTATTTCTCTCATCACACTTTGAAATGAAAGACCTAGGAGAAGTAGACGTAATCCTAGGTGTTAAA
ATCAGGAAAAATAAAACTAGTATGTCTCTATGTCAATCTCACTACGTGGAGAAAATACTAAAGAAGTTTGATTCATTTGATGTTTCTCCAGTGAGAACTCCCTTTGACAC
TAGTAAACATCTTAAGAAGAATAAAGGAAATAGTGTGTCTCAACCTGAATATGCAAAGATCATAGGTAGTGTGATGTATTTAATGAATTACACTAGACCTGATGTTGTAT
ATGCTGTCAGTAGATTGAGTAGATATACACATAATCCTGATAGATACCACTGGGATGCCTTATGCCATCTATTGAGATATCTTAAAGGGACGATAGATTACTGTTTACAC
TTCAACAAATTTCTTGTCGTATTAGAAGGATATTGTGATGCAAATTGGGTCACAGATAATGATGAGGTTAACTCCACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAGC
AATATCTTGGAAGTCTGCAAAACAGACTTGTATAGTTAGATCCACGATAGAATCCAAATTTATATCATTAGAGTTGGCAGGATAG
Protein sequenceShow/hide protein sequence
MTQPEGVKVSGQENKVCKLRKSLYDLKQAPKQWYENFNNTLINNGFKINSSDTCVYSKVFGADYILICLYVDDMLIFGTNMELITNTKLFLSSHFEMKDLGEVDVILGVK
IRKNKTSMSLCQSHYVEKILKKFDSFDVSPVRTPFDTSKHLKKNKGNSVSQPEYAKIIGSVMYLMNYTRPDVVYAVSRLSRYTHNPDRYHWDALCHLLRYLKGTIDYCLH
FNKFLVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIVRSTIESKFISLELAG