; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0245861 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0245861
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr09:9389675..9390418
RNA-Seq ExpressionCmc09g0245861
SyntenyCmc09g0245861
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0009231 - riboflavin biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003935 - GTP cyclohydrolase II activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032876.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.2e-11893.07Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFRDRTHGL+GLSQKAYINKVLEKFKMDKCSSSVVPIQK DKFSLMQCPKNELERNQMETIPYASIVGSLL AQTCTRPDISF VG
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDS+F GCVDTRKSTFGYLFLLAEGAISW+S KQSIIAAS+ME EFVACFEATVH
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV
        GLWL NFISGLGIVDSIAK LRIYCDNS  V
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV

KAA0057393.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-10583.98Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI I IFRDRTHGL+GLSQ  YINKVLE FKMDKCSSSVV IQK D+FSLMQCPKNELERNQMETIPYA IVGSLLYA TCTR DI F +G
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGMDHWK AKKVLRYLQGTKDYM TYKR DHLEVIGYSD +F  CVDTRKSTFGYLFLLA+G  SW+S K SIIAAS+M+AEFVACFEATVH
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV
        GLWLRNFI GLGIV+S+AK LRIYCDNS  V
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV

KYP64910.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]7.1e-10682.25Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFRDR+ GL+GLSQKAYINK+LE+F+MDKCS+S VPIQK DKFSLMQCPKN+LER QME IPYASIVGSL+Y QTCTRPDISF VG
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNP +DHWK AKKV+RYLQGTK++MLTY+RSDHLEVIGYSDS+FAGCVDTRKSTF YLF+LA GAISW+SAKQS+IAAS+MEAEFVACFEA V 
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV
          WLRNFIS LG+VDSIAK L+IYCDNS  V
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV

RZC12926.1 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Glycine soja]1.2e-10579.57Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFR+R+ GL+GLSQKAYINKVLE+F+M+KCS+S VPIQK DKFSL QCPKN+LER QME IPY S+VGS++YA+TCTRPDISF  G
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGM+HWK AKKVLRYLQGTKD+MLTYKRSDHLEVIGYSDS+FAGCVDTRKST G++FLLA GA+SW+SAKQS++AAS+MEAEFVACFEAT+ 
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK
          WLRNFISGLGIVDSIA+ L++YCDNS AV   K
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK

RZC25410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]1.6e-10580Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFR+R+ GL+GLSQKAYINKVLE+F+M+KCS+S VPIQK DKFSL QCPKN+LER QME IPYAS+VGS++YAQTCTRPDISF  G
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGM+HWK AKKVLRYLQGTKD++LTYKRSDHLEVIGYSDS+FAGCVDTRKST G++FLLA GAISW+SAKQS++AAS+MEA FVACFEAT+ 
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK
          WLRNFISGLGIVDSIA+ L++YCDNS AV   K
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK

TrEMBL top hitse value%identityAlignment
A0A151TCW7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.4e-10682.25Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFRDR+ GL+GLSQKAYINK+LE+F+MDKCS+S VPIQK DKFSLMQCPKN+LER QME IPYASIVGSL+Y QTCTRPDISF VG
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNP +DHWK AKKV+RYLQGTK++MLTY+RSDHLEVIGYSDS+FAGCVDTRKSTF YLF+LA GAISW+SAKQS+IAAS+MEAEFVACFEA V 
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV
          WLRNFIS LG+VDSIAK L+IYCDNS  V
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV

A0A445KPV1 GTP cyclohydrolase II5.8e-10679.57Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFR+R+ GL+GLSQKAYINKVLE+F+M+KCS+S VPIQK DKFSL QCPKN+LER QME IPY S+VGS++YA+TCTRPDISF  G
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGM+HWK AKKVLRYLQGTKD+MLTYKRSDHLEVIGYSDS+FAGCVDTRKST G++FLLA GA+SW+SAKQS++AAS+MEAEFVACFEAT+ 
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK
          WLRNFISGLGIVDSIA+ L++YCDNS AV   K
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK

A0A445LQ30 Retrovirus-related Pol polyprotein from transposon TNT 1-947.6e-10680Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFR+R+ GL+GLSQKAYINKVLE+F+M+KCS+S VPIQK DKFSL QCPKN+LER QME IPYAS+VGS++YAQTCTRPDISF  G
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGM+HWK AKKVLRYLQGTKD++LTYKRSDHLEVIGYSDS+FAGCVDTRKST G++FLLA GAISW+SAKQS++AAS+MEA FVACFEAT+ 
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK
          WLRNFISGLGIVDSIA+ L++YCDNS AV   K
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKK

A0A5A7SS51 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-11893.07Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI IEIFRDRTHGL+GLSQKAYINKVLEKFKMDKCSSSVVPIQK DKFSLMQCPKNELERNQMETIPYASIVGSLL AQTCTRPDISF VG
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDS+F GCVDTRKSTFGYLFLLAEGAISW+S KQSIIAAS+ME EFVACFEATVH
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV
        GLWL NFISGLGIVDSIAK LRIYCDNS  V
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV

A0A5A7UNB8 Retrovirus-related Pol polyprotein from transposon TNT 1-945.8e-10683.98Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKDM EASYVI I IFRDRTHGL+GLSQ  YINKVLE FKMDKCSSSVV IQK D+FSLMQCPKNELERNQMETIPYA IVGSLLYA TCTR DI F +G
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        MLGRYQSNPGMDHWK AKKVLRYLQGTKDYM TYKR DHLEVIGYSD +F  CVDTRKSTFGYLFLLA+G  SW+S K SIIAAS+M+AEFVACFEATVH
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV
        GLWLRNFI GLGIV+S+AK LRIYCDNS  V
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.3e-3536.48Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        M D++E  + I I I  +     I LSQ AY+ K+L KF M+ C++   P+  +  + L       L  ++    P  S++G L+Y   CTRPD++  V 
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLE--VIGYSDSEFAGCVDTRKSTFGYLFLLAE-GAISWRSAKQSIIAASSMEAEFVACFEA
        +L RY S    + W+  K+VLRYL+GT D  L +K++   E  +IGY DS++AG    RKST GYLF + +   I W + +Q+ +AASS EAE++A FEA
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLE--VIGYSDSEFAGCVDTRKSTFGYLFLLAE-GAISWRSAKQSIIAASSMEAEFVACFEA

Query:  TVHGLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKKTTSILK
            LWL+  ++ + I   +   ++IY DN   +S     S  K
Subjt:  TVHGLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKKTTSILK

P0CV72 Secreted RxLR effector protein 1614.5e-3146.62Show/hide
Query:  METIPYASIVGSLLYAQTCTRPDISFTVGMLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGA
        M+ +PY S VG+++Y    TRPD++  VG+L ++ S+P   HW+  K+VLRYLQ T+ Y L + R+   +++GYSD+++AG V++R+ST GYLF L  G 
Subjt:  METIPYASIVGSLLYAQTCTRPDISFTVGMLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGA

Query:  ISWRSAKQSIIAASSMEAEFVACFEATVHGLWL
        +SWRS KQ  +A SS E E++A  EAT   +WL
Subjt:  ISWRSAKQSIIAASSMEAEFVACFEATVHGLWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-4740.51Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        MKD+  A  ++ ++I R+RT   + LSQ+ YI +VLE+F M        P+    K S   CP    E+  M  +PY+S VGSL+YA  CTRPDI+  VG
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
        ++ R+  NPG +HW+  K +LRYL+GT    L +  SD + + GY+D++ AG +D RKS+ GYLF  + GAISW+S  Q  +A S+ EAE++A  E    
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKKTT
         +WL+ F+  LG+     K   +YCD+ +A+   K +
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAVSSKKTT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.4e-2433.92Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        +KD  E  Y + IE  R  T   + LSQ+ YI  +L +  M        P+    K SL    K        +   Y  IVGSL Y    TRPDIS+ V 
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
         L ++   P  +H +  K++LRYL GT ++ +  K+ + L +  YSD+++AG  D   ST GY+  L    ISW S KQ  +  SS EAE+ +    +  
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDN
          W+ + ++ LGI   + +   IYCDN
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDN

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.4e-2433.92Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        +K+  +  Y + IE    R    + LSQ+ Y   +L +  M        P+    K +L    K        +   Y  IVGSL Y    TRPD+S+ V 
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
         L +Y   P  DHW   K+VLRYL GT D+ +  K+ + L +  YSD+++AG  D   ST GY+  L    ISW S KQ  +  SS EAE+ +    +  
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDN
          W+ + ++ LGI  S   +  IYCDN
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDN

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.3e-2731.17Show/hide
Query:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG
        ++D+    Y + +EI R      I + Q+ Y   +L++  +  C  S VP+     FS           + ++   Y  ++G L+Y Q  TR DISF V 
Subjt:  MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVG

Query:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH
         L ++   P + H +   K+L Y++GT    L Y     +++  +SD+ F  C DTR+ST GY   L    ISW+S KQ +++ SS EAE+ A   AT  
Subjt:  MLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVH

Query:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV
         +WL  F   L +   ++K   ++CDN+ A+
Subjt:  GLWLRNFISGLGIVDSIAKLLRIYCDNSTAV

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.8e-0935.44Show/hide
Query:  TCTRPDISFTVGMLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLL
        T TRPD++F V  L ++ S       +   KVL Y++GT    L Y  +  L++  ++DS++A C DTR+S  G+  L+
Subjt:  TCTRPDISFTVGMLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLL

ATMG00810.1 DNA/RNA polymerases superfamily protein2.8e-2033.5Show/hide
Query:  MKDMSEASYVIEIEIFRDRTH--GLIGLSQKAYINKVLEKFKMDKCS--SSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDIS
        MKD+    Y + I+I   +TH  GL  LSQ  Y  ++L    M  C   S+ +P++     S  + P         +   + SIVG+L Y  T TRPDIS
Subjt:  MKDMSEASYVIEIEIFRDRTH--GLIGLSQKAYINKVLEKFKMDKCS--SSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDIS

Query:  FTVGMLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVA
        + V ++ +    P +  + + K+VLRY++GT  + L   ++  L V  + DS++AGC  TR+ST G+   L    ISW + +Q  ++ SS E E+ A
Subjt:  FTVGMLGRYQSNPGMDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATATGAGTGAGGCATCCTATGTGATTGAAATTGAAATATTCCGTGACCGAACACATGGATTGATAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGA
GAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAGAAGGAAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAA
CTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTACTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGA
ATGGATCATTGGAAAGTTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAGGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGA
TTCAGAATTTGCCGGATGTGTGGATACAAGAAAATCCACTTTTGGCTATTTGTTCCTGTTAGCTGAAGGAGCAATTTCATGGAGAAGTGCAAAGCAGTCTATTATCGCTG
CATCCTCTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGCGAAACTTTATCTCAGGACTTGGAATTGTCGATAGTATTGCCAAGCTG
CTGAGAATTTATTGTGATAATTCTACAGCAGTTTCTTCTAAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATATGAGTGAGGCATCCTATGTGATTGAAATTGAAATATTCCGTGACCGAACACATGGATTGATAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGA
GAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAGAAGGAAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAA
CTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTACTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGA
ATGGATCATTGGAAAGTTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAGGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGA
TTCAGAATTTGCCGGATGTGTGGATACAAGAAAATCCACTTTTGGCTATTTGTTCCTGTTAGCTGAAGGAGCAATTTCATGGAGAAGTGCAAAGCAGTCTATTATCGCTG
CATCCTCTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGCGAAACTTTATCTCAGGACTTGGAATTGTCGATAGTATTGCCAAGCTG
CTGAGAATTTATTGTGATAATTCTACAGCAGTTTCTTCTAAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAA
Protein sequenceShow/hide protein sequence
MKDMSEASYVIEIEIFRDRTHGLIGLSQKAYINKVLEKFKMDKCSSSVVPIQKEDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFTVGMLGRYQSNPG
MDHWKVAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSEFAGCVDTRKSTFGYLFLLAEGAISWRSAKQSIIAASSMEAEFVACFEATVHGLWLRNFISGLGIVDSIAKL
LRIYCDNSTAVSSKKTTSILKVLNIWN