CuGenDBv2

Gene ID	Cmc09g0246111
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr09:9728859..9731340
RNA-Seq Expression	Cmc09g0246111
Synteny	Cmc09g0246111
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031931.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

83.48

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPS+S
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSRIA PLTQLTRKGAPFVWSK CEDSFQNLKQKLVTA VLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHP KANVVADAL RKVSHSAALITRQAPLH+D ERAEI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVT QLAQLTVQSTLRQ+IIDAQ  DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+P+WKWEN+SMDFITGLPRTL GF VIWVVVDRLTKSAHF+PGKSTYTASK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIV DRDARFT KFWKGLQ AMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LYGKCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSP+C
Subjt:  RSPVC

KAA0037291.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

83.35

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSRIATPLTQLTRKG PFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHPGKANVVADAL RK+SHSAALITRQAPLH+D ER EI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPS SAVKTELLSEAHSSPFSMHP +TKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWR+MKR+VAEFVSKCLVCQQVKAPRQKPAGLLQPLS+P+WKWENVSMDFITGLPRTL GFTVIWVVVDRLTKSAHF+PGKSTYTASK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIVSDRDARFT KFWKGLQAAMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LYGKCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

83.6

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHPGKANVVADAL RKVSHSAALITRQAPLH+D ERAEI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHP STKMY+D+KRV
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+P+WKWENVSMDFITGLPRTL GFTVIWVVVDRLTKSAHF+PGKSTYTASK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIVSDRDARFT KFWK LQ AMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSW SHLHLMEF YNNS+QATIGM+PFE LYGKCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

83.35

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHPGKANVVADAL RKVSHSAALITRQAPLH+D ERAEI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHP STKMYQDLKR+
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+P+WKWENVSMDFI GLPRTL GFTVIWVVVDRLTKSAHF+PGKSTYT SK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIVSDRDARFT KFWKGLQ AMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LY KCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSP+C
Subjt:  RSPVC

KAA0062245.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

86.83

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW IL SVVDTRE DVSLSSEPVVRDY DVFPEELPGLP HRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPST+SEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------KELNMKQ-----
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD  KKGLGCVLMQQGK      ++L   +     
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------KELNMKQ-----

Query:  --------RRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKR
                RRWL+LVKDYDCEILYHPGKANVVADAL RKVSHSAALITRQAPLH+D ERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKR
Subjt:  --------RRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKR

Query:  GLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS
        GLAEAGQA EFS SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP QKPAGLLQPLS
Subjt:  GLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS

Query:  VPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAF
        +P+WKWENVSMDFITGLPRTL GF+VIWVVVDRLTKSAHF+ GKSTYTASK AQLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQ AMGTRLDFSTAF
Subjt:  VPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAF

Query:  HPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCCRSPVC
        HPQTDGQTERLNQVLEDMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LYGKCC+SPVC
Subjt:  HPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCCRSPVC

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQU8 Reverse transcriptase

0.0e+00

83.48

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPS+S
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSRIA PLTQLTRKGAPFVWSK CEDSFQNLKQKLVTA VLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHP KANVVADAL RKVSHSAALITRQAPLH+D ERAEI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVT QLAQLTVQSTLRQ+IIDAQ  DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+P+WKWEN+SMDFITGLPRTL GF VIWVVVDRLTKSAHF+PGKSTYTASK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIV DRDARFT KFWKGLQ AMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LYGKCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSP+C
Subjt:  RSPVC

A0A5A7T6R9 Reverse transcriptase

0.0e+00

83.35

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKI+AVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSRIATPLTQLTRKG PFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHPGKANVVADAL RK+SHSAALITRQAPLH+D ER EI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPS SAVKTELLSEAHSSPFSMHP +TKMYQDLKRV
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWR+MKR+VAEFVSKCLVCQQVKAPRQKPAGLLQPLS+P+WKWENVSMDFITGLPRTL GFTVIWVVVDRLTKSAHF+PGKSTYTASK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIVSDRDARFT KFWKGLQAAMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LYGKCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

A0A5A7U330 Reverse transcriptase

0.0e+00

83.6

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHPGKANVVADAL RKVSHSAALITRQAPLH+D ERAEI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHP STKMY+D+KRV
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+P+WKWENVSMDFITGLPRTL GFTVIWVVVDRLTKSAHF+PGKSTYTASK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIVSDRDARFT KFWK LQ AMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSW SHLHLMEF YNNS+QATIGM+PFE LYGKCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

A0A5A7UP94 Pol protein

0.0e+00

83.35

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------
        GLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD SKKGLGCVLMQQGK                  
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------------------

Query:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI
                                               KELNM+QRRWL+LVKDYDCEILYHPGKANVVADAL RKVSHSAALITRQAPLH+D ERAEI
Subjt:  ---------------------------------------KELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEI

Query:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV
        AVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHP STKMYQDLKR+
Subjt:  AVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRV

Query:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR
        YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS+P+WKWENVSMDFI GLPRTL GFTVIWVVVDRLTKSAHF+PGKSTYT SK AQLYMSEIVR
Subjt:  YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVR

Query:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC
        LHGVPVSIVSDRDARFT KFWKGLQ AMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LY KCC
Subjt:  LHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCC

Query:  RSPVC
        RSP+C
Subjt:  RSPVC

A0A5A7V8L8 Pol protein

0.0e+00

86.83

Show/hide

Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS
        +RASKLLSQGTW IL SVVDTRE DVSLSSEPVVRDY DVFPEELPGLP HRE+EFAIELE GTVPISRA YRMA AELKELKVQL+E LDKGFIRPSVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL
        DLMNRVF+EFLDTF+IVFIDDILIYSKTEAEHEEHLR                        VSFLGHVVSKAGVSVDPAKIEAVT W RPST+SEV SFL
Subjt:  DLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------KELNMKQ-----
        GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK CEDSFQNLKQKLVTAPVLTVPDG  SFVIYSD  KKGLGCVLMQQGK      ++L   +     
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQGK------KELNMKQ-----

Query:  --------RRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKR
                RRWL+LVKDYDCEILYHPGKANVVADAL RKVSHSAALITRQAPLH+D ERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQS DP L EKR
Subjt:  --------RRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPDLAEKR

Query:  GLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS
        GLAEAGQA EFS SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHP STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP QKPAGLLQPLS
Subjt:  GLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS

Query:  VPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAF
        +P+WKWENVSMDFITGLPRTL GF+VIWVVVDRLTKSAHF+ GKSTYTASK AQLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQ AMGTRLDFSTAF
Subjt:  VPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAF

Query:  HPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCCRSPVC
        HPQTDGQTERLNQVLEDMLRACALEFPGSW SHLHLMEFAYNNS+QATIGM+PFE LYGKCC+SPVC
Subjt:  HPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCCRSPVC

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.2e-100

28.37

Show/hide

Query:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +   +Y +   +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----
          ++QG+T+F+K+DL+S YH +R++  D  K AF    G +E++VM +G++ APA F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H++     
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----

Query:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
                           V F+G+ +S+ G +     I+ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   + W+ T   + +N
Subjt:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------
        +KQ LV+ PVL   D  +  ++ +D S   +G VL Q+                           KE+                                
Subjt:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------

Query:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD
                 N +  RW   ++D++ EI Y PG AN +ADAL R       ++    P+ +D E   I          + Q+++    + +++   + D  
Subjt:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD

Query:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA
        L     L    + VE +     GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR
        G LQP+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FT + WK         
Subjt:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR

Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M+PFE+++
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY

P0CT35 Transposon Tf2-2 polyprotein

1.2e-100

28.37

Show/hide

Query:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +   +Y +   +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----
          ++QG+T+F+K+DL+S YH +R++  D  K AF    G +E++VM +G++ APA F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H++     
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----

Query:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
                           V F+G+ +S+ G +     I+ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   + W+ T   + +N
Subjt:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------
        +KQ LV+ PVL   D  +  ++ +D S   +G VL Q+                           KE+                                
Subjt:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------

Query:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD
                 N +  RW   ++D++ EI Y PG AN +ADAL R       ++    P+ +D E   I          + Q+++    + +++   + D  
Subjt:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD

Query:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA
        L     L    + VE +     GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR
        G LQP+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FT + WK         
Subjt:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR

Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M+PFE+++
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY

P0CT36 Transposon Tf2-3 polyprotein

1.2e-100

28.37

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Query:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +   +Y +   +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----
          ++QG+T+F+K+DL+S YH +R++  D  K AF    G +E++VM +G++ APA F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H++     
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----

Query:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
                           V F+G+ +S+ G +     I+ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   + W+ T   + +N
Subjt:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------
        +KQ LV+ PVL   D  +  ++ +D S   +G VL Q+                           KE+                                
Subjt:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------

Query:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD
                 N +  RW   ++D++ EI Y PG AN +ADAL R       ++    P+ +D E   I          + Q+++    + +++   + D  
Subjt:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD

Query:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA
        L     L    + VE +     GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR
        G LQP+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FT + WK         
Subjt:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR

Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M+PFE+++
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY

P0CT37 Transposon Tf2-4 polyprotein

1.2e-100

28.37

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Query:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +   +Y +   +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----
          ++QG+T+F+K+DL+S YH +R++  D  K AF    G +E++VM +G++ APA F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H++     
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----

Query:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
                           V F+G+ +S+ G +     I+ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   + W+ T   + +N
Subjt:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------
        +KQ LV+ PVL   D  +  ++ +D S   +G VL Q+                           KE+                                
Subjt:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------

Query:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD
                 N +  RW   ++D++ EI Y PG AN +ADAL R       ++    P+ +D E   I          + Q+++    + +++   + D  
Subjt:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD

Query:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA
        L     L    + VE +     GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR
        G LQP+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FT + WK         
Subjt:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR

Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M+PFE+++
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY

P0CT41 Transposon Tf2-12 polyprotein

1.2e-100

28.37

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Query:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +   +Y +   +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----
          ++QG+T+F+K+DL+S YH +R++  D  K AF    G +E++VM +G++ APA F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H++     
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFIDDILIYSKTEAEHEEHLR-----

Query:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
                           V F+G+ +S+ G +     I+ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   + W+ T   + +N
Subjt:  ------------------TVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------
        +KQ LV+ PVL   D  +  ++ +D S   +G VL Q+                           KE+                                
Subjt:  LKQKLVTAPVLTVPDGLRSFVIYSDDSKKGLGCVLMQQ-------------------------GKKEL--------------------------------

Query:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD
                 N +  RW   ++D++ EI Y PG AN +ADAL R       ++    P+ +D E   I          + Q+++    + +++   + D  
Subjt:  ---------NMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSYDPD

Query:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA
        L     L    + VE +     GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  LAEKRGLAEAGQAVEFSTSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPA

Query:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR
        G LQP+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  +P   + TA + A+++   ++   G P  I++D D  FT + WK         
Subjt:  GLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTR

Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M+PFE+++
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

9.8e-21

45.19

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Query:  VSFLG--HVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGL
        +++LG  H++S  GVS DPAK+EA+  WP P   +E+  FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PVL +PD  
Subjt:  VSFLG--HVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGL

Query:  RSFV
          FV
Subjt:  RSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGTTGATGTGTCCCTGTCATCAGAGCCAGTGGTGAGGGACTA
TCTGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCCCCACACAGAGAGATTGAGTTTGCCATTGAGCTGGAGTCGGGTACGGTTCCTATATCCAGAGCTTCATACAGAA
TGGCCCTAGCAGAATTGAAAGAACTGAAAGTGCAGTTACGGGAGTTTCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCACCAGTTTTATTTGTTAAG
AAGAAGGATGGATCGATGCGCCTATGTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTACCCAGGATCGACGATCTATTTGACCAGTTACA
GGGAGCTACAGTATTCTCTAAGATCGACCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATAGGGATGTACCGAAGACAGCCTTTTGTTCCAGATATGGACACTATG
AGTTTATTGTGATGTCTTTCGGTTTGACGAATGCTCCGGCAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGAGTTCTTGGACACTTTTTTGATCGTGTTTATTGAT
GATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTACGGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAA
GATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACGGTCAGTGAGGTTCTTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAG
CTACTCCTCTTACTCAGTTGACCAGGAAAGGAGCTCCTTTTGTTTGGAGCAAGACATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTT
ACTGTACCTGATGGTTTAAGGAGTTTTGTGATTTACAGTGATGATTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGAAGGAATTGAATATGAAACAGCG
AAGATGGCTTCAGTTAGTGAAGGATTACGATTGTGAGATATTATATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGGAGAAAGGTATCACATTCAGCAGCAC
TTATTACCCGACAGGCCCCATTGCATCAAGATTTTGAGAGGGCTGAAATTGCAGTGTCAGTAGGGGCAGTCACGATGCAGTTAGCCCAGTTGACGGTACAGTCGACTTTG
AGGCAGAAGATCATTGATGCTCAGAGTTACGATCCTGATTTGGCTGAGAAGCGTGGCCTAGCAGAGGCGGGGCAAGCTGTTGAGTTCTCCACATCCTCTGATGGTGGACT
TTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGATAGTACGAAGATGT
ATCAGGATCTGAAACGGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGACAGAAACCA
GCGGGTTTATTACAACCCTTGAGCGTACCGAAATGGAAGTGGGAAAACGTGTCCATGGACTTCATTACAGGACTGCCTAGAACTCTGATGGGTTTTACAGTGATTTGGGT
TGTGGTTGACAGACTTACCAAATCAGCACACTTCATTCCGGGTAAATCCACCTATACTGCTAGTAAGCGCGCACAGTTGTACATGTCTGAGATAGTGAGACTACATGGAG
TGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTTCAAATTCTGGAAGGGTTTGCAAGCTGCTATGGGCACGAGGTTAGACTTTAGTACGGCTTTCCACCCA
CAGACTGATGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCTTGTGCATTAGAATTCCCAGGTAGTTGGGGTTCCCACTTGCATTTGATGGAATT
TGCTTATAATAACAGTTTTCAGGCTACCATTGGCATGTCACCATTTGAGGTCTTGTACGGCAAATGTTGTAGATCCCCTGTTTGCTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELESGTVPISRASYRMALAELKELKVQLREFLDKGFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFCSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFLIVFID
DILIYSKTEAEHEEHLRTVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVLSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVL
TVPDGLRSFVIYSDDSKKGLGCVLMQQGKKELNMKQRRWLQLVKDYDCEILYHPGKANVVADALRRKVSHSAALITRQAPLHQDFERAEIAVSVGAVTMQLAQLTVQSTL
RQKIIDAQSYDPDLAEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPDSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP
AGLLQPLSVPKWKWENVSMDFITGLPRTLMGFTVIWVVVDRLTKSAHFIPGKSTYTASKRAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQAAMGTRLDFSTAFHP
QTDGQTERLNQVLEDMLRACALEFPGSWGSHLHLMEFAYNNSFQATIGMSPFEVLYGKCCRSPVC

Cmc09g0246111 (gene) of Melon (Charmono) v1.1 genome