| GenBank top hits | e value | %identity | Alignment |
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| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 1.3e-91 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.3e-91 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| KAA0066633.1 hypothetical protein E6C27_scaffold979G00520 [Cucumis melo var. makuwa] | 2.0e-100 | 97.27 | Show/hide |
Query: MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRT
MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKK+++NQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGIT HFTVTYTPQQNGLAERLNRT
Subjt: MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRT
Query: IMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFI
IMERTRCLLTNASLPLKFWGEAARTACYLINRSPS TLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFI
Subjt: IMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFI
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| TYK13826.1 putative polyprotein [Cucumis melo var. makuwa] | 1.3e-91 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.3e-91 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 6.2e-92 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| A0A5A7UB25 Putative gag-pol polyprotein | 6.2e-92 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| A0A5A7VF14 Integrase catalytic domain-containing protein | 9.5e-101 | 97.27 | Show/hide |
Query: MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRT
MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKK+++NQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGIT HFTVTYTPQQNGLAERLNRT
Subjt: MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRT
Query: IMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFI
IMERTRCLLTNASLPLKFWGEAARTACYLINRSPS TLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFI
Subjt: IMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFI
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| A0A5D3CTV2 Putative polyprotein | 6.2e-92 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| A0A5D3DNU1 Putative gag-pol polyprotein | 6.2e-92 | 89.13 | Show/hide |
Query: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
K SMGGSRYFISIIDDFSRK W+Y LKQKDEAFGKFLEWKK++ENQTGRKVKYLRTDN LEFVNNKFN FCKS+GIT HFTVTYTPQQNGLAER NRTI
Subjt: KGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTI
Query: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
MERTRCLLTNASLPLKFWGEAA+TACYLINRSPS LNLKTPQ+VW GKAPSL+HLRVF CT YAHVKDGKLNKRALKCMFIGY
Subjt: MERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALKCMFIGY
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 9.3e-37 | 41.62 | Show/hide |
Query: SMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTIMER
++ YF+ +D F+ Y +K K + F F ++ + E KV YL DN E+++N+ FC KGI+ H TV +TPQ NG++ER+ RTI E+
Subjt: SMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTIMER
Query: TRCLLTNASLPLKFWGEAARTACYLINRSPSATL--NLKTPQDVWAGKAPSLDHLRVFECTTYAHVKD--GKLNKRALKCMFIGY
R +++ A L FWGEA TA YLINR PS L + KTP ++W K P L HLRVF T Y H+K+ GK + ++ K +F+GY
Subjt: TRCLLTNASLPLKFWGEAARTACYLINRSPSATL--NLKTPQDVWAGKAPSLDHLRVFECTTYAHVKD--GKLNKRALKCMFIGY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.6e-49 | 50 | Show/hide |
Query: MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRT
M+ SMGG++YF++ IDD SRK W+Y LK KD+ F F ++ +E +TGRK+K LR+DN E+ + +F +C S GI TV TPQ NG+AER+NRT
Subjt: MKGPSMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRT
Query: IMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHV---KDGKLNKRALKCMFIGY
I+E+ R +L A LP FWGEA +TACYLINRSPS L + P+ VW K S HL+VF C +AHV + KL+ +++ C+FIGY
Subjt: IMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHV---KDGKLNKRALKCMFIGY
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 5.0e-14 | 42.17 | Show/hide |
Query: LNRTIMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALK
+NRTI+E+ R +L LP F +AA TA ++IN+ PS +N P +VW P+ +LR F C Y H +GKL RA K
Subjt: LNRTIMERTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKDGKLNKRALK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.7e-26 | 35.75 | Show/hide |
Query: RYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTIMERTRCLL
RY++ +D F+R W+Y LKQK + F+ +K +EN+ ++ +DN EFV + GI+ + +TP+ NGL+ER +R I+E LL
Subjt: RYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFTVTYTPQQNGLAERLNRTIMERTRCLL
Query: TNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVK---DGKLNKRALKCMFIGY
++AS+P +W A A YLINR P+ L L++P G +P+ D LRVF C Y ++ KL+ ++ +C+F+GY
Subjt: TNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVK---DGKLNKRALKCMFIGY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.3e-26 | 36.76 | Show/hide |
Query: SMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFT-VTYTPQQNGLAERLNRTIME
S+ RY++ +D F+R W+Y LKQK + F+ +K +EN+ ++ L +DN EFV ++ GI SHFT +TP+ NGL+ER +R I+E
Subjt: SMGGSRYFISIIDDFSRKEWMYTLKQKDEAFGKFLEWKKRIENQTGRKVKYLRTDNDLEFVNNKFNNFCKSKGITSHFT-VTYTPQQNGLAERLNRTIME
Query: RTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKD---GKLNKRALKCMFIGY
LL++AS+P +W A A YLINR P+ L L++P G+ P+ + L+VF C Y ++ KL ++ +C F+GY
Subjt: RTRCLLTNASLPLKFWGEAARTACYLINRSPSATLNLKTPQDVWAGKAPSLDHLRVFECTTYAHVKD---GKLNKRALKCMFIGY
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