| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033021.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.7e-103 | 86.94 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ KGFV SEHPKHVYK NKALYGLKQA RAWY+RLTVYLRGKGYS+GEI KTLFIH KSDQLLVAQIYVDDIIFG FPQDL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
+NNFINIMQ E E+SMVGELSCFLGLQIKQKND+I ISQEKYA+NMVKKFGLEQARNKRTPAAT+VKLTK+T+GAEVDHKLY+SIVG+LLYLT SRPDIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
Y + I ARYQADPRITHL+VVK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| KAA0042994.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.5e-102 | 86.04 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ KGF+ SEHPKHVYK NKALYGLKQ RAWY+RLT YLR +GYSRGEI KTLFIH KSDQLLVAQIYVDDIIFGGFPQDL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
V+NFINIMQ EFE+SMVGEL CFLGLQIKQKND IFISQEKYA++MVKKFGLEQA+NKRTPA T+VKLTKDT+GAEVDHKLYRSIVGSLLYLT SR DIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
YA+ ICARYQADPRITHL+ VK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| KAA0053137.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.4e-105 | 88.64 | Show/hide |
Query: VKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDLVN
VKS FLNGY NEEVYVAQ KGFV SEHPKHVYK NKALYGLKQALRAWY+RLTVYLRG+GYSRGEI K LFIH KSDQLLVAQIYVDDIIFGGFP DL+N
Subjt: VKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDLVN
Query: NFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIAYA
NFINIMQ EFE+SMVGELSCFLGLQIKQKND IFISQEKYA+NMVKKFGL+QARNKRTPAAT+VKLTKDT+GAEVDHKLYRSIVGSLLYLT SRPDIAY
Subjt: NFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIAYA
Query: IRICARYQADPRITHLDVVK
+ ICARYQADPRIT L+VVK
Subjt: IRICARYQADPRITHLDVVK
|
|
| TYK03438.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.7e-103 | 86.94 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ KGFV SEHPKHVYK NKALYGLKQA RAWY+RLTVYLRGKGYS+GEI KTLFIH KSDQLLVAQIYVDDIIFG FPQDL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
+NNFINIMQ E E+SMVGELSCFLGLQIKQKND+I ISQEKYA+NMVKKFGLEQARNKRTPAAT+VKLTK+T+GAEVDHKLY+SIVG+LLYLT SRPDIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
Y + I ARYQADPRITHL+VVK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| TYK23188.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.0e-103 | 86.94 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ K FV SEHPKHVYK NKALYGLKQA R WYERLTVYLRGKGYSRGEI KTLFIH KSDQLLVAQIYVDDIIFGGFP DL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
VNNFINIMQ EFE+SMVGELSCFLG QIKQKND+I ISQ+KYAKNM KKFGLEQARNKRTPAAT+VKLT+D DGAEVDHKLYRSIV +LLYLT SRPDIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
YA+ ICARYQADPRI+HL+ VK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SU23 Gag-pol polyprotein | 8.4e-104 | 86.94 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ KGFV SEHPKHVYK NKALYGLKQA RAWY+RLTVYLRGKGYS+GEI KTLFIH KSDQLLVAQIYVDDIIFG FPQDL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
+NNFINIMQ E E+SMVGELSCFLGLQIKQKND+I ISQEKYA+NMVKKFGLEQARNKRTPAAT+VKLTK+T+GAEVDHKLY+SIVG+LLYLT SRPDIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
Y + I ARYQADPRITHL+VVK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| A0A5A7TI28 Putative gag-pol polyprotein | 7.1e-103 | 86.04 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ KGF+ SEHPKHVYK NKALYGLKQ RAWY+RLT YLR +GYSRGEI KTLFIH KSDQLLVAQIYVDDIIFGGFPQDL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
V+NFINIMQ EFE+SMVGEL CFLGLQIKQKND IFISQEKYA++MVKKFGLEQA+NKRTPA T+VKLTKDT+GAEVDHKLYRSIVGSLLYLT SR DIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
YA+ ICARYQADPRITHL+ VK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| A0A5D3BPB3 Gag-pol polyprotein | 1.2e-105 | 88.64 | Show/hide |
Query: VKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDLVN
VKS FLNGY NEEVYVAQ KGFV SEHPKHVYK NKALYGLKQALRAWY+RLTVYLRG+GYSRGEI K LFIH KSDQLLVAQIYVDDIIFGGFP DL+N
Subjt: VKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDLVN
Query: NFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIAYA
NFINIMQ EFE+SMVGELSCFLGLQIKQKND IFISQEKYA+NMVKKFGL+QARNKRTPAAT+VKLTKDT+GAEVDHKLYRSIVGSLLYLT SRPDIAY
Subjt: NFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIAYA
Query: IRICARYQADPRITHLDVVK
+ ICARYQADPRIT L+VVK
Subjt: IRICARYQADPRITHLDVVK
|
|
| A0A5D3BWU5 Gag-pol polyprotein | 8.4e-104 | 86.94 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ KGFV SEHPKHVYK NKALYGLKQA RAWY+RLTVYLRGKGYS+GEI KTLFIH KSDQLLVAQIYVDDIIFG FPQDL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
+NNFINIMQ E E+SMVGELSCFLGLQIKQKND+I ISQEKYA+NMVKKFGLEQARNKRTPAAT+VKLTK+T+GAEVDHKLY+SIVG+LLYLT SRPDIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
Y + I ARYQADPRITHL+VVK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| A0A5D3DI97 Gag-pol polyprotein | 4.9e-104 | 86.94 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
M VKSAFLNGY NEEVYVAQ K FV SEHPKHVYK NKALYGLKQA R WYERLTVYLRGKGYSRGEI KTLFIH KSDQLLVAQIYVDDIIFGGFP DL
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
VNNFINIMQ EFE+SMVGELSCFLG QIKQKND+I ISQ+KYAKNM KKFGLEQARNKRTPAAT+VKLT+D DGAEVDHKLYRSIV +LLYLT SRPDIA
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
YA+ ICARYQADPRI+HL+ VK
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.8e-24 | 31.8 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKS--DQLLVAQIYVDDIIFGGFPQ
M VK+AFLNG EE+Y+ +G S + +V K NKA+YGLKQA R W+E L+ + + + ++I K ++ + +YVDD++
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKS--DQLLVAQIYVDDIIFGGFPQ
Query: DLVNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAAT---YVKLTKDTDGAEVDHKLYRSIVGSLLY-LTT
+NNF + +F ++ + E+ F+G++I+ + D I++SQ Y K ++ KF +E TP + Y L D D + RS++G L+Y +
Subjt: DLVNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAAT---YVKLTKDTDGAEVDHKLYRSIVGSLLY-LTT
Query: SRPDIAYAIRICARYQA
+RPD+ A+ I +RY +
Subjt: SRPDIAYAIRICARYQA
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-26 | 31.03 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSD-QLLVAQIYVDDIIFGGFPQD
+ VK+AFL+G EE+Y+ Q +GF + V K NK+LYGLKQA R WY + +++ + Y + ++ S+ ++ +YVDD++ G +
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSD-QLLVAQIYVDDIIFGGFPQD
Query: LVNNFINIMQLEFEISMVGELSCFLGLQI--KQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHK------LYRSIVGSLLY
L+ + F++ +G LG++I ++ + +++SQEKY + ++++F ++ A+ TP A ++KL+K V+ K Y S VGSL+Y
Subjt: LVNNFINIMQLEFEISMVGELSCFLGLQI--KQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHK------LYRSIVGSLLY
Query: -LTTSRPDIAYAIRICARYQADPRITHLDVVK
+ +RPDIA+A+ + +R+ +P H + VK
Subjt: -LTTSRPDIAYAIRICARYQADPRITHLDVVK
|
|
| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.1e-15 | 35.51 | Show/hide |
Query: IYVDDIIFGGFPQDLVNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEV-DHKLYRS
+YVDDI+ G L+N I + F + +G + FLG+QIK +F+SQ KYA+ ++ G+ + TP +KL A+ D +RS
Subjt: IYVDDIIFGGFPQDLVNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEV-DHKLYRS
Query: IVGSLLYLTTSRPDIAYAIRICARYQADPRITHLDVVK
IVG+L YLT +RPDI+YA+ I + +P + D++K
Subjt: IVGSLLYLTTSRPDIAYAIRICARYQADPRITHLDVVK
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.0e-31 | 34.23 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
+ V +AFL G ++VY++Q GF+ + P +V K KALYGLKQA RAWY L YL G+ +LF+ + ++ +YVDDI+ G L
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
++N ++ + F + EL FLG++ K+ + +SQ +Y +++ + + A+ TP A KL+ + D YR IVGSL YL +RPDI+
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
YA+ +++ P HL +K
Subjt: YAIRICARYQADPRITHLDVVK
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.1e-31 | 33.78 | Show/hide |
Query: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
+ V +AFL G +EVY++Q GFV + P +V + KA+YGLKQA RAWY L YL G+ +LF+ + ++ +YVDDI+ G L
Subjt: MGVKSAFLNGYSNEEVYVAQRKGFVASEHPKHVYKHNKALYGLKQALRAWYERLTVYLRGKGYSRGEIGKTLFIHTKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
+ + ++ + F + +L FLG++ K+ + +SQ +Y +++ + + A+ TP AT KLT + D YR IVGSL YL +RPD++
Subjt: VNNFINIMQLEFEISMVGELSCFLGLQIKQKNDNIFISQEKYAKNMVKKFGLEQARNKRTPAATYVKLTKDTDGAEVDHKLYRSIVGSLLYLTTSRPDIA
Query: YAIRICARYQADPRITHLDVVK
YA+ ++Y P H + +K
Subjt: YAIRICARYQADPRITHLDVVK
|
|
