| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-112 | 97.13 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETF PVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ+VCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKK+NKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| KAA0047456.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-116 | 100 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-112 | 97.13 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETF PVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ+VCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKK+NKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| TYJ98650.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-116 | 100 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-112 | 97.13 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETF PVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ+VCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKK+NKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 5.4e-113 | 97.13 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETF PVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ+VCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKK+NKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| A0A5A7TZQ3 Gag/pol protein | 8.1e-117 | 100 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| A0A5A7UYE8 Gag/pol protein | 5.4e-113 | 97.13 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETF PVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ+VCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKK+NKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| A0A5D3BFS9 Gag/pol protein | 8.1e-117 | 100 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| A0A5D3CYF4 Gag/pol protein | 5.4e-113 | 97.13 | Show/hide |
Query: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETF PVAMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYE
Query: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ+VCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKK+NKGKVAFLVLYVDDILLIGND
Subjt: IWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
Query: VGYLTDVKA
VGYLTDVKA
Subjt: VGYLTDVKA
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.5e-38 | 38.35 | Show/hide |
Query: DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQM
DK W +A++ E+ + N+ W + PE + +W++ K + G +KARLVA+G+TQ+ +DYEETF PVA + S R +LS+ Y+ ++ QM
Subjt: DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQM
Query: DVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVY--KKMNKGKVAFLVLYVDDILLIGNDVG
DVKTAFLNG L+E I+M P+G VCKLN++IY LKQA+R W F+ +K F + + C+Y K N + +++LYVDD+++ D+
Subjt: DVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVY--KKMNKGKVAFLVLYVDDILLIGNDVG
Query: YLTDVK
+ + K
Subjt: YLTDVK
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.2e-54 | 47.8 | Show/hide |
Query: DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQM
+K+Q +KAM EMES+ N ++LV+LP+G +P+ CKW++K K+D K+ +KARLV KG+ Q++G+D++E F PV + SIR +LS+A D E+ Q+
Subjt: DKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQM
Query: DVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVY-KKMNKGKVAFLVLYVDDILLIGNDVGY
DVKTAFL+G+LEE I+M QPEGF G++ VCKLN+S+Y LKQA R W ++FD+ +KS + + +PCVY K+ ++ L+LYVDD+L++G D G
Subjt: DVKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVY-KKMNKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVK
+ +K
Subjt: LTDVK
|
|
| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.3e-14 | 41.86 | Show/hide |
Query: WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIA
W +AM E++++ N W LV P +GCKW++K K S G + KARLVAKG+ Q EG+ + ET+ PV +IR +L++A
Subjt: WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIA
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.0e-41 | 41.54 | Show/hide |
Query: DQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQMD
++W AM E+ + N W+LV P V +GC+WI+ +K +S G + +KARLVAKGY QR G+DY ETF PV SIRI+L +A + I Q+D
Subjt: DQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQMD
Query: VKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
V AFL G L + ++MSQP GFI + + VCKL +++Y LKQA R+W + + + GF +V + ++ + ++++YVDDIL+ GND
Subjt: VKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-41 | 41.54 | Show/hide |
Query: DQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQMD
D+W +AM E+ + N W+LV P V +GC+WI+ +K +S G + +KARLVAKGY QR G+DY ETF PV SIRI+L +A + I Q+D
Subjt: DQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFFPVAMLKSIRILLSIATFYDYEIWQMD
Query: VKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
V AFL G L + ++MSQP GF+ + + VC+L ++IY LKQA R+W + T + + GF ++ + ++ + ++++YVDDIL+ GND
Subjt: VKTAFLNGNLEESIFMSQPEGFITQGQEQEVCKLNRSIYRLKQASRSWNIRFDTTIKSYGFNQNVDEPCVYKKMNKGKVAFLVLYVDDILLIGND
|
|
