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Cmc09g0246751 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0246751
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag protease polyprotein
Genome locationCMiso1.1chr09:10842294..10854432
RNA-Seq ExpressionCmc09g0246751
SyntenyCmc09g0246751
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043122.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-1076.09Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        VRVWRGADR+GARR+REGHMDASGFLYAS DVF    F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
KAA0062237.1 pol protein [Cucumis melo var. makuwa]2.1e-0976.09Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        VRV RGADR+GARR+REGHMDASGFLYASTDVF+    S VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
TYK07515.1 hypothetical protein E5676_scaffold702G00010 [Cucumis melo var. makuwa]1.3e-0872.34Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVF-VTFYFSFVRWNHG
        VRVW+GADR+GARR+REGHMDASGFLYAS DVF     F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVF-VTFYFSFVRWNHG
TYK22547.1 hypothetical protein E5676_scaffold7461G00010 [Cucumis melo var. makuwa]2.5e-1073.91Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        +RVWRGADR+GARR+REGHMDASGFLYAS DVF    F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
TYK23908.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-1076.09Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        VRVWRGADR+GARR+REGHMDASGFLYAS DVF    F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
TrEMBL top hitse value%identityAlignment
A0A5A7TIH6 Ty3-gypsy retrotransposon protein7.0e-1176.09Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        VRVWRGADR+GARR+REGHMDASGFLYAS DVF    F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
A0A5A7V5K6 Pol protein1.0e-0976.09Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        VRV RGADR+GARR+REGHMDASGFLYASTDVF+    S VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
A0A5D3C7Q9 Uncharacterized protein6.5e-0972.34Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVF-VTFYFSFVRWNHG
        VRVW+GADR+GARR+REGHMDASGFLYAS DVF     F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVF-VTFYFSFVRWNHG
A0A5D3DFS0 Uncharacterized protein1.2e-1073.91Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        +RVWRGADR+GARR+REGHMDASGFLYAS DVF    F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
A0A5D3DK66 Ty3-gypsy retrotransposon protein7.0e-1176.09Show/hide
Query:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
        VRVWRGADR+GARR+REGHMDASGFLYAS DVF    F  VR +HG
Subjt:  VRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTGTGTAAGGGTATGGCGAGGGGCAGACCGGCAAGGGGCAAGAAGGATACGTGAAGGCCATATGGACGCGTCTGGTTTTCTTTATGCTTCCACTGATGTTTTTGT
TACTTTTTATTTTTCATTTGTCAGGTGGAATCATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATAAATCTCATTTTGTAGAGAAAAAGTAGTTCAGATCCATCTTCGGTCACAAGGGTTGCATTATGGACTAAAGCACACAAAAGGAAGGATGGAGAACCGGTGAATTCACA
AGTTGCCGAGACACTTGAGCGCATTCAACAAACTGAGGTTGAGATGACAGTTTCAACAACAAACGTGGCTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCGTGGTC
ATGTAAGAGGATTTGTGTAACGCCCCAAATTTCGAGACACCGATGCTCAGATGTTCTGTGTAAGGGTATGGCGAGGGGCAGACCGGCAAGGGGCAAGAAGGATACGTGAA
GGCCATATGGACGCGTCTGGTTTTCTTTATGCTTCCACTGATGTTTTTGTTACTTTTTATTTTTCATTTGTCAGGTGGAATCATGGTTAGAACATCGGTTTTACCATTTT
ATTTTGATGACTTTGTGAACCATATTTTGGAACTTTTGAGAAAGTGATCTAAAACTGTTTTTATGATATTCTGAATGTTTTTAATGAATCGTAATCGGTCTTTTATGAGC
TTGTGTGTTTTACTGTCGAGTCTTAGCAGTACGTAGTGACCTCAGCTTAGTCCAGAAAGTTAGATCGTTACAATTTAGGTTTAGTGTGACTCGTTCAAAACTATCTCTTT
TGTCTCAACAAGATCACAAGTATAAGGTTTTTGAAAAAGAATATTTGAAGATGAAGGAAAAAATGGTAGAAATGAAAACAATGAAAGATGAAATGATAGAAATGA
Protein sequenceShow/hide protein sequence
MFCVRVWRGADRQGARRIREGHMDASGFLYASTDVFVTFYFSFVRWNHG