; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0246781 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0246781
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr09:10890531..10892552
RNA-Seq ExpressionCmc09g0246781
SyntenyCmc09g0246781
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR001969 - Aspartic peptidase, active site
IPR021109 - Aspartic peptidase domain superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047468.1 hypothetical protein E6C27_scaffold498G00810 [Cucumis melo var. makuwa]0.0e+0098.36Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTAD CPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTP EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD

Query:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
        LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLET RANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
Subjt:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG

Query:  LAGYYRRFMD
        LA     F +
Subjt:  LAGYYRRFMD

TYJ98666.1 hypothetical protein E5676_scaffold507G00570 [Cucumis melo var. makuwa]0.0e+0098.36Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTAD CPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTP EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD

Query:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
        LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLET RANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
Subjt:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG

Query:  LAGYYRRFMD
        LA     F +
Subjt:  LAGYYRRFMD

TYK01576.1 pol protein [Cucumis melo var. makuwa]0.0e+0084.72Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRF PD+V+D  ARTEKFVRGLRLDLQ IVRALRP THADALR+ALDLSL ERAD+ KAA RGSALGQKRKVE QPD+ PQR LRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGR LRELP C +CG VH G CLA S VCFRCRQP HTAD+CPRKP ETTP QP  +QQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPL  VLSVSTPSGEVLLSKE+IKAC++EIA +MLDVTLLVL MQDFDVILGMDWLSANHA+IDC+GKEVVFNP 
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        S  SFKF+  G+VC PKVISAMKASKLLSQGTW ILAS+VD REPEVSLSSEPVVREYPDVFPDEL GL P RE+DFAIELEP TAPISRAPYRM P EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNRYPLPRIDDLFDQLQG TVFSKIDL                      
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------

Query:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT
        YGHYEF+V+SFGL+NAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTE EHEEHLH+VLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP 
Subjt:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT

Query:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG
        KIEAV +W RPSTVSEIRSFLGLAGYYRRF++DFSRIAS LTQLTR+G
Subjt:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG

TYK06888.1 pol protein [Cucumis melo var. makuwa]0.0e+0084.72Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRF PD+V+D  ARTEKFVRGLRLDLQ IVRALRP THADALR+ALDLSL ERAD+ KAA RGSALGQKRKVE QPD+ PQR LRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGR LRELP C +CG VH G CLA S VCFRCRQP HTAD+CPRKP ETTP QP  +QQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPL  VLSVSTPSGEVLLSKE+IKAC++EIA +MLDVTLLVL MQDFDVILGMDWLSANHA+IDC+GKEVVFNP 
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        S  SFKF+  G+VC PKVISAMKASKLLSQGTW ILAS+VD REPEVSLSSEPVVREYPDVFPDEL GL P RE+DFAIELEP TAPISRAPYRM P EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNRYPLPRIDDLFDQLQG TVFSKIDL                      
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------

Query:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT
        YGHYEF+V+SFGL+NAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTE EHEEHLH+VLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP 
Subjt:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT

Query:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG
        KIEAV +W RPSTVSEIRSFLGLAGYYRRF++DFSRIAS LTQLTR+G
Subjt:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG

TYK20443.1 pol protein [Cucumis melo var. makuwa]0.0e+0084.72Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRF PD+V+D  ARTEKFVRGLRLDLQ IVRALRP THADALR+ALDLSL ERAD+ KAA RGSALGQKRKVE QPD+ PQR LRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGR LRELP C +CG VH G CLA S VCFRCRQP HTAD+CPRKP ETTP QP  +QQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPL  VLSVSTPSGEVLLSKE+IKAC++EIA +MLDVTLLVL MQDFDVILGMDWLSANHA+IDC+GKEVVFNP 
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        S  SFKF+  G+VC PKVISAMKASKLLSQGTW ILAS+VD REPEVSLSSEPVVREYPDVFPDEL GL P RE+DFAIELEP TAPISRAPYRM P EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNRYPLPRIDDLFDQLQG TVFSKIDL                      
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------

Query:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT
        YGHYEF+V+SFGL+NAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTE EHEEHLH+VLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP 
Subjt:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT

Query:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG
        KIEAV +W RPSTVSEIRSFLGLAGYYRRF++DFSRIAS LTQLTR+G
Subjt:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG

TrEMBL top hitse value%identityAlignment
A0A5A7TX34 Uncharacterized protein0.0e+0098.36Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTAD CPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTP EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD

Query:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
        LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLET RANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
Subjt:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG

Query:  LAGYYRRFMD
        LA     F +
Subjt:  LAGYYRRFMD

A0A5A7V2A0 Reverse transcriptase0.0e+0084.72Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRF PD+V+D  ARTEKFVRGLRLDLQ IVRALRP THADALR+ALDLSL ERAD+ KAA RGSALGQKRKVE QPD+ PQR LRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGR LRELP C +CG VH G CLA S VCFRCRQP HTAD+CPRKP ETTP QP  +QQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPL  VLSVSTPSGEVLLSKE+IKAC++EIA +MLDVTLLVL MQDFDVILGMDWLSANHA+IDC+GKEVVFNP 
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        S  SFKF+  G+VC PKVISAMKASKLLSQGTW ILAS+VD REPEVSLSSEPVVREYPDVFPDEL GL P RE+DFAIELEP TAPISRAPYRM P EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNRYPLPRIDDLFDQLQG TVFSKIDL                      
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------

Query:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT
        YGHYEF+V+SFGL+NAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTE EHEEHLH+VLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP 
Subjt:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT

Query:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG
        KIEAV +W RPSTVSEIRSFLGLAGYYRRF++DFSRIAS LTQLTR+G
Subjt:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG

A0A5D3BHW7 Uncharacterized protein0.0e+0098.36Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTAD CPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTP EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMD

Query:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
        LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLET RANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG
Subjt:  LMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLG

Query:  LAGYYRRFMD
        LA     F +
Subjt:  LAGYYRRFMD

A0A5D3BTN0 Reverse transcriptase0.0e+0084.72Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRF PD+V+D  ARTEKFVRGLRLDLQ IVRALRP THADALR+ALDLSL ERAD+ KAA RGSALGQKRKVE QPD+ PQR LRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGR LRELP C +CG VH G CLA S VCFRCRQP HTAD+CPRKP ETTP QP  +QQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPL  VLSVSTPSGEVLLSKE+IKAC++EIA +MLDVTLLVL MQDFDVILGMDWLSANHA+IDC+GKEVVFNP 
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        S  SFKF+  G+VC PKVISAMKASKLLSQGTW ILAS+VD REPEVSLSSEPVVREYPDVFPDEL GL P RE+DFAIELEP TAPISRAPYRM P EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNRYPLPRIDDLFDQLQG TVFSKIDL                      
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------

Query:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT
        YGHYEF+V+SFGL+NAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTE EHEEHLH+VLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP 
Subjt:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT

Query:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG
        KIEAV +W RPSTVSEIRSFLGLAGYYRRF++DFSRIAS LTQLTR+G
Subjt:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG

A0A5D3C6W3 Reverse transcriptase0.0e+0084.72Show/hide
Query:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG
        MTVEQYDAEFDMLSRF PD+V+D  ARTEKFVRGLRLDLQ IVRALRP THADALR+ALDLSL ERAD+ KAA RGSALGQKRKVE QPD+ PQR LRSG
Subjt:  MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSG

Query:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA
        GVFQRHRRELAAAGR LRELP C +CG VH G CLA S VCFRCRQP HTAD+CPRKP ETTP QP  +QQGRVFATTRQEAERAGTVVTGTLPILGHYA
Subjt:  GVFQRHRRELAAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYA

Query:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS
        FVLFDSGSSHSFISSVFVQHVGLEVEPL  VLSVSTPSGEVLLSKE+IKAC++EIA +MLDVTLLVL MQDFDVILGMDWLSANHA+IDC+GKEVVFNP 
Subjt:  FVLFDSGSSHSFISSVFVQHVGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPS

Query:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL
        S  SFKF+  G+VC PKVISAMKASKLLSQGTW ILAS+VD REPEVSLSSEPVVREYPDVFPDEL GL P RE+DFAIELEP TAPISRAPYRM P EL
Subjt:  SRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVEL

Query:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------
        KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNRYPLPRIDDLFDQLQG TVFSKIDL                      
Subjt:  KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL----------------------

Query:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT
        YGHYEF+V+SFGL+NAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTE EHEEHLH+VLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDP 
Subjt:  YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPT

Query:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG
        KIEAV +W RPSTVSEIRSFLGLAGYYRRF++DFSRIAS LTQLTR+G
Subjt:  KIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRG

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.2e-4328.93Show/hide
Query:  QDFDVILGMDWLSANHASIDCFGKEV---------VFNPSSRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPD
        +++D++LG   L+   A+I    +EV         +   ++     F+ V ++    +    K S +L    + +     + ++   +L     +++Y D
Subjt:  QDFDVILGMDWLSANHASIDCFGKEV---------VFNPSSRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYPD

Query:  VFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCINYRELNKVTVKNRY
        +   E   L+ + +    I  + +    S+  Y       +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ I+YR+LN++TV +R+
Subjt:  VFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCINYRELNKVTVKNRY

Query:  PLPRIDDLFDQLQGGTVFSKIDL----------------------YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEE
        P+P +D++  +L     F+ IDL                      +GHYE++ + FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH +
Subjt:  PLPRIDDLFDQLQGGTVFSKIDL----------------------YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEE

Query:  HLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRGL
         L  V E L    L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +P P+   EI++FLGL GYYR+F+ +F+ IA  +T+  ++ +
Subjt:  HLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRGL

P20825 Retrovirus-related Pol polyprotein from transposon 2972.1e-4334.83Show/hide
Query:  APISRAPYRMTPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL--
        +PI    Y +      E++ Q+QE+L++G IR S SP+ +P   V KK         R+ I+YR+LN++T+ +RYP+P +D++  +L     F+ IDL  
Subjt:  APISRAPYRMTPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDL--

Query:  --------------------YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWL
                             GHYE++ + FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +  V   L    L  +  KCEF  
Subjt:  --------------------YGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWL

Query:  KKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRR
        K+  FLGH+V+ +G+  +P K++A++S+P P+   EIR+FLGL GYYR+F+ +++ IA  +T   ++
Subjt:  KKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRR

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein8.5e-4534.04Show/hide
Query:  KASKLLSQGTWSILASIVDTREPEVSLSSEP---------VVREYPDVFPDELSGLSPSREIDF-------AIELEPDTAPISRAPYRMTPVELKELKVQ
        +AS L   G +S + S + + EP  +  S           + ++Y ++  ++L    P R  D         IE++P        PY +T    +E+   
Subjt:  KASKLLSQGTWSILASIVDTREPEVSLSSEP---------VVREYPDVFPDELSGLSPSREIDF-------AIELEPDTAPISRAPYRMTPVELKELKVQ

Query:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLY----------------------GHYEF
        +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC++YR LNK T+ + +PLPRID+L  ++    +F+ +DL+                      G YE+
Subjt:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLY----------------------GHYEF

Query:  IVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVI
         V+ FGL NAP+ F   M   F+D    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ 
Subjt:  IVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVI

Query:  SWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIA
         +P P TV + + FLG+  YYRRF+ + S+IA
Subjt:  SWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIA

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.4e-4229.44Show/hide
Query:  DVTLLVL-GMQDFDVILGMDWLSANHASIDCFGKEVVFNPSSRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYP
        D+T  VL  +  FD I+G D L    A +D     ++  P  +      R  I   P + +          GT  IL S++                E+P
Subjt:  DVTLLVL-GMQDFDVILGMDWLSANHASIDCFGKEVVFNPSSRTSFKFKRVGIVCTPKVISAMKASKLLSQGTWSILASIVDTREPEVSLSSEPVVREYP

Query:  DVFPDELSGLSPSREIDFAIELEPDTAPISRA-PYRMTPVELK-ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCINYRELNKVTVK
         +F   LSG+S    +   I         +++ PY   PV ++ E++ Q+ ELL  G IRPS SP+ +P+  V KK     +   R+ ++++ LN VT+ 
Subjt:  DVFPDELSGLSPSREIDFAIELEPDTAPISRA-PYRMTPVELK-ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCINYRELNKVTVK

Query:  NRYPLPRIDDLFDQLQGGTVFSKID----------------------LYGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVE
        + YP+P I+     L     F+ +D                      L G YEF+ + FGL NAPA+F  +++ + ++ +     V+IDDI+++S+    
Subjt:  NRYPLPRIDDLFDQLQGGTVFSKID----------------------LYGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVE

Query:  HEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTR
        H ++L  VL +L    L     K  F   +V FLG++V+++G+  DP K+ A+   P P++V E++ FLG+  YYR+F+ D++++A  LT LTR
Subjt:  HEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTR

Q99315 Transposon Ty3-G Gag-Pol polyprotein8.5e-4534.04Show/hide
Query:  KASKLLSQGTWSILASIVDTREPEVSLSSEP---------VVREYPDVFPDELSGLSPSREIDF-------AIELEPDTAPISRAPYRMTPVELKELKVQ
        +AS L   G +S + S + + EP  +  S           + ++Y ++  ++L    P R  D         IE++P        PY +T    +E+   
Subjt:  KASKLLSQGTWSILASIVDTREPEVSLSSEP---------VVREYPDVFPDELSGLSPSREIDF-------AIELEPDTAPISRAPYRMTPVELKELKVQ

Query:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLY----------------------GHYEF
        +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC++YR LNK T+ + +PLPRID+L  ++    +F+ +DL+                      G YE+
Subjt:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLY----------------------GHYEF

Query:  IVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVI
         V+ FGL NAP+ F   M   F+D    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ 
Subjt:  IVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVI

Query:  SWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIA
         +P P TV + + FLG+  YYRRF+ + S+IA
Subjt:  SWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIA

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.7e-2042.34Show/hide
Query:  HLHRVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRGLLLFG
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DP K+EA++ WP P   +E+R FLGL GYYRRF+ ++ +I   LT+L ++  L + 
Subjt:  HLHRVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRGLLLFG

Query:  TQLARVASKSL
        T++A +A K+L
Subjt:  TQLARVASKSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTGGAGCAGTACGACGCTGAATTTGACATGCTGTCCCGTTTTGTCCCTGATGTAGTGAAGGATAATGAGGCCAGGACCGAGAAGTTTGTCAGAGGTCTCCGATT
AGACCTCCAGGATATTGTTCGAGCCCTCAGACCAACCACTCATGCTGATGCTTTACGCGTGGCACTAGATTTGAGTCTGCATGAGAGAGCTGATTCGTTTAAGGCTGCCG
ACAGAGGGTCAGCCCTTGGACAGAAGAGGAAGGTGGAGCTGCAACCTGACTTAACACCGCAGCGAAATCTGAGGTCAGGAGGTGTCTTCCAGCGGCACCGTCGCGAGCTT
GCAGCAGCCGGGAGAATCCTGAGAGAGCTACCTGTTTGTCATAGCTGTGGGATAGTGCATGAAGGTCATTGCTTGGCCGAGAGCAGAGTTTGCTTCAGATGCAGGCAACC
AGAGCATACCGCTGACGTTTGTCCTCGAAAACCCATTGAGACTACCCCGCACCAGCCTCCCACTTCCCAGCAGGGAAGAGTTTTTGCCACTACCCGTCAGGAGGCCGAGC
GAGCCGGTACAGTGGTGACAGGTACGCTCCCAATCTTGGGACACTATGCTTTCGTGCTGTTTGACTCTGGGTCATCCCATTCGTTCATATCCTCTGTGTTCGTTCAGCAT
GTCGGTTTAGAAGTAGAACCATTGAGTGGTGTTTTATCTGTTTCTACTCCATCTGGGGAGGTTCTGTTGTCTAAAGAAAAGATAAAGGCATGTCAGATAGAGATAGCAAA
ACAGATGTTAGATGTGACCTTACTAGTGTTAGGCATGCAGGATTTTGATGTAATCCTAGGCATGGATTGGCTGTCTGCTAACCATGCAAGTATAGACTGTTTCGGTAAGG
AAGTCGTTTTTAACCCTTCCTCTAGGACTAGTTTCAAATTTAAGAGGGTAGGAATTGTATGTACACCCAAGGTCATCTCGGCCATGAAGGCTAGTAAACTACTCAGCCAG
GGTACCTGGAGCATCTTGGCAAGCATAGTAGATACCCGAGAACCAGAAGTTTCCTTGTCCTCCGAACCAGTGGTACGTGAGTACCCCGATGTTTTCCCCGACGAGCTTTC
TGGACTTTCGCCTTCCAGGGAGATAGACTTCGCCATCGAGTTAGAGCCAGACACTGCCCCTATCTCGAGGGCCCCTTACAGAATGACTCCAGTTGAGCTAAAGGAGCTGA
AAGTACAACTGCAGGAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGC
ATTAACTATAGAGAGCTGAACAAGGTGACAGTCAAGAACCGTTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGGCACCGTCTTTTCTAAGATCGA
CCTATACGGGCACTACGAGTTCATCGTGATATCTTTTGGTTTGAGTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTG
TCATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGTCGAGCATGAGGAGCATTTGCACCGGGTTTTGGAGACTCTTCGAGCCAATAAGCTATACGCCAAG
TTCTCTAAGTGTGAGTTCTGGCTGAAGAAGGTGACTTTCCTCGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGACCCAACAAAGATCGAAGCGGTTATCAGTTGGCC
TCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCATGGACGACTTCTCTCGTATAGCTAGTCTCTTAACTCAGTTGACCA
GGAGGGGACTCCTTTTGTTTGGAACCCAGCTTGCGAGAGTAGCTTCCAAGAGCTTAAGCAGAAGCTTGTGTGTGCACCAGTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTGGAGCAGTACGACGCTGAATTTGACATGCTGTCCCGTTTTGTCCCTGATGTAGTGAAGGATAATGAGGCCAGGACCGAGAAGTTTGTCAGAGGTCTCCGATT
AGACCTCCAGGATATTGTTCGAGCCCTCAGACCAACCACTCATGCTGATGCTTTACGCGTGGCACTAGATTTGAGTCTGCATGAGAGAGCTGATTCGTTTAAGGCTGCCG
ACAGAGGGTCAGCCCTTGGACAGAAGAGGAAGGTGGAGCTGCAACCTGACTTAACACCGCAGCGAAATCTGAGGTCAGGAGGTGTCTTCCAGCGGCACCGTCGCGAGCTT
GCAGCAGCCGGGAGAATCCTGAGAGAGCTACCTGTTTGTCATAGCTGTGGGATAGTGCATGAAGGTCATTGCTTGGCCGAGAGCAGAGTTTGCTTCAGATGCAGGCAACC
AGAGCATACCGCTGACGTTTGTCCTCGAAAACCCATTGAGACTACCCCGCACCAGCCTCCCACTTCCCAGCAGGGAAGAGTTTTTGCCACTACCCGTCAGGAGGCCGAGC
GAGCCGGTACAGTGGTGACAGGTACGCTCCCAATCTTGGGACACTATGCTTTCGTGCTGTTTGACTCTGGGTCATCCCATTCGTTCATATCCTCTGTGTTCGTTCAGCAT
GTCGGTTTAGAAGTAGAACCATTGAGTGGTGTTTTATCTGTTTCTACTCCATCTGGGGAGGTTCTGTTGTCTAAAGAAAAGATAAAGGCATGTCAGATAGAGATAGCAAA
ACAGATGTTAGATGTGACCTTACTAGTGTTAGGCATGCAGGATTTTGATGTAATCCTAGGCATGGATTGGCTGTCTGCTAACCATGCAAGTATAGACTGTTTCGGTAAGG
AAGTCGTTTTTAACCCTTCCTCTAGGACTAGTTTCAAATTTAAGAGGGTAGGAATTGTATGTACACCCAAGGTCATCTCGGCCATGAAGGCTAGTAAACTACTCAGCCAG
GGTACCTGGAGCATCTTGGCAAGCATAGTAGATACCCGAGAACCAGAAGTTTCCTTGTCCTCCGAACCAGTGGTACGTGAGTACCCCGATGTTTTCCCCGACGAGCTTTC
TGGACTTTCGCCTTCCAGGGAGATAGACTTCGCCATCGAGTTAGAGCCAGACACTGCCCCTATCTCGAGGGCCCCTTACAGAATGACTCCAGTTGAGCTAAAGGAGCTGA
AAGTACAACTGCAGGAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGC
ATTAACTATAGAGAGCTGAACAAGGTGACAGTCAAGAACCGTTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGGCACCGTCTTTTCTAAGATCGA
CCTATACGGGCACTACGAGTTCATCGTGATATCTTTTGGTTTGAGTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTG
TCATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGTCGAGCATGAGGAGCATTTGCACCGGGTTTTGGAGACTCTTCGAGCCAATAAGCTATACGCCAAG
TTCTCTAAGTGTGAGTTCTGGCTGAAGAAGGTGACTTTCCTCGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGACCCAACAAAGATCGAAGCGGTTATCAGTTGGCC
TCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCATGGACGACTTCTCTCGTATAGCTAGTCTCTTAACTCAGTTGACCA
GGAGGGGACTCCTTTTGTTTGGAACCCAGCTTGCGAGAGTAGCTTCCAAGAGCTTAAGCAGAAGCTTGTGTGTGCACCAGTCCTGA
Protein sequenceShow/hide protein sequence
MTVEQYDAEFDMLSRFVPDVVKDNEARTEKFVRGLRLDLQDIVRALRPTTHADALRVALDLSLHERADSFKAADRGSALGQKRKVELQPDLTPQRNLRSGGVFQRHRREL
AAAGRILRELPVCHSCGIVHEGHCLAESRVCFRCRQPEHTADVCPRKPIETTPHQPPTSQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQH
VGLEVEPLSGVLSVSTPSGEVLLSKEKIKACQIEIAKQMLDVTLLVLGMQDFDVILGMDWLSANHASIDCFGKEVVFNPSSRTSFKFKRVGIVCTPKVISAMKASKLLSQ
GTWSILASIVDTREPEVSLSSEPVVREYPDVFPDELSGLSPSREIDFAIELEPDTAPISRAPYRMTPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
INYRELNKVTVKNRYPLPRIDDLFDQLQGGTVFSKIDLYGHYEFIVISFGLSNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEVEHEEHLHRVLETLRANKLYAK
FSKCEFWLKKVTFLGHVVSSEGVSVDPTKIEAVISWPRPSTVSEIRSFLGLAGYYRRFMDDFSRIASLLTQLTRRGLLLFGTQLARVASKSLSRSLCVHQS